Os12g0620600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0620600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.75 | 0.265 | 9.78 | 1.57 | 1.47 | -0.161 | -0.211 | 1.44 | 0.149 | 3.08 | 21.8 | 704 | -- | -- |
| 38.48 | 0.289 | 9.83 | 1.27 | 1.5 | -0.262 | -0.027 | -- | 0.101 | 2.98 | 21.3 | 3425 | -- | -- |
| 31.84 | 0.263 | 9.78 | 1.56 | 1.46 | -0.161 | -- | 1.42 | 0.149 | 3.07 | 21.83 | 659 | -- | -- |
| 34.44 | 0.273 | 9.8 | 1.61 | 1.47 | -0.643 | -- | -- | 0.144 | 3.15 | 14.2 | 47520 | -- | -- |
| 144.41 | 0.563 | 9.79 | 1.37 | -- | -0.51 | -- | 0.399 | 0.197 | -- | 22.02 | 245 | -- | -- |
| 40.16 | 0.297 | 9.84 | 1.06 | 1.47 | -- | -0.211 | -- | -0.0112 | 3.19 | -- | -- | -- | -- |
| 40.3 | 0.297 | 9.84 | 1.07 | 1.47 | -- | -- | -- | -0.00992 | 3.16 | -- | -- | -- | -- |
| 101.72 | 0.47 | 9.79 | 1.37 | -- | -0.846 | -- | -- | 0.278 | -- | 26.4 | 146 | -- | -- |
| 47.99 | 0.323 | 9.92 | -- | 1.46 | 0.694 | -- | -- | -0.371 | 3.19 | 22.01 | 47520 | -- | -- |
| 162.61 | 0.596 | 9.84 | 1.13 | -- | -- | -- | -- | 0.0285 | -- | -- | -- | -- | -- |
| 70.4 | 0.393 | 9.87 | -- | 1.49 | -- | -- | -- | -0.129 | 3.17 | -- | -- | -- | -- |
| 148.7 | 0.568 | 9.83 | -- | -- | -0.746 | -- | -- | 0.0612 | -- | 26.45 | 146 | -- | -- |
| 196.36 | 0.654 | 9.86 | -- | -- | -- | -- | -- | -0.097 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.26 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 2 | 31.26 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 15 | 31.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 16 | 31.44 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 19 | 31.44 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 62 | 31.76 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 65 | 31.79 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 9 |
| 67 | 31.80 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 69 | 31.81 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 78 | 31.83 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 8 |
| 99 | 31.88 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 113 | 31.89 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 114 | 31.89 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 117 | 31.90 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 137 | 31.97 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 15 |
| 139 | 31.98 | radiation | 40 | 43200 | < th | dose independent | rect. | 16 | 8 |
| 146 | 32.01 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 193 | 32.07 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 196 | 32.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 204 | 32.10 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 8 |
| 216 | 32.12 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 257 | 32.18 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 262 | 32.18 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 13 |
| 282 | 32.21 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 11 |
| 300 | 32.24 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 341 | 32.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 356 | 32.35 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 384 | 32.41 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 431 | 32.48 | radiation | 20 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 458 | 32.51 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 477 | 32.53 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 478 | 32.53 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 519 | 32.54 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 540 | 32.55 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 602 | 32.56 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 603 | 32.56 | atmosphere | 995 | 43200 | > th | dose dependent | sin | 11 | NA |
| 609 | 32.56 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 678 | 32.57 | atmosphere | 1015 | 43200 | < th | dose dependent | sin | 11 | NA |
| 681 | 32.57 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 684 | 32.57 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 746 | 32.58 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 867 | 32.60 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 874 | 32.60 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 9 | 1 |