Os12g0614000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0614000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.22 | 0.206 | 10.7 | -0.781 | 0.307 | 0.6 | 0.0896 | 0.453 | -0.246 | 9.41 | 21.59 | 1533 | -- | -- |
| 19.46 | 0.205 | 10.7 | -0.885 | 0.335 | 0.538 | 0.12 | -- | -0.286 | 9.37 | 22.1 | 2000 | -- | -- |
| 19.25 | 0.204 | 10.7 | -0.779 | 0.306 | 0.6 | -- | 0.452 | -0.246 | 9.41 | 21.59 | 1535 | -- | -- |
| 19.5 | 0.206 | 10.7 | -0.881 | 0.336 | 0.535 | -- | -- | -0.285 | 9.37 | 22.07 | 1999 | -- | -- |
| 24.61 | 0.231 | 10.7 | -0.745 | -- | 0.536 | -- | 0.407 | -0.247 | -- | 22.05 | 1551 | -- | -- |
| 29.36 | 0.254 | 10.7 | -0.663 | 0.306 | -- | 0.106 | -- | -0.107 | 9.3 | -- | -- | -- | -- |
| 29.4 | 0.254 | 10.7 | -0.659 | 0.306 | -- | -- | -- | -0.106 | 9.31 | -- | -- | -- | -- |
| 25 | 0.233 | 10.7 | -0.86 | -- | 0.534 | -- | -- | -0.282 | -- | 22.1 | 1552 | -- | -- |
| 37.08 | 0.284 | 10.7 | -- | 0.325 | 0.279 | -- | -- | -0.13 | 8.8 | 22.43 | 1627 | -- | -- |
| 34.86 | 0.276 | 10.7 | -0.661 | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
| 40.86 | 0.299 | 10.6 | -- | 0.306 | -- | -- | -- | -0.033 | 9.47 | -- | -- | -- | -- |
| 40.81 | 0.299 | 10.7 | -- | -- | 0.288 | -- | -- | -0.104 | -- | 22.1 | 1552 | -- | -- |
| 46.38 | 0.318 | 10.6 | -- | -- | -- | -- | -- | -0.0319 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 3 |
| 13 | 20.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 14 | 20.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 17 | 20.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 39 | 20.32 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 46 | 20.34 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 89 | 20.43 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 155 | 20.56 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 180 | 20.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 195 | 20.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 215 | 20.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 230 | 20.64 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 290 | 20.69 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 355 | 20.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 383 | 20.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 464 | 20.83 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 614 | 20.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 673 | 21.00 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 686 | 21.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 722 | 21.05 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 749 | 21.08 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 750 | 21.08 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 798 | 21.13 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 878 | 21.23 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 910 | 21.26 | temperature | 15 | 10 | > th | dose dependent | sin | 7 | NA |
| 934 | 21.27 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 949 | 21.28 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 952 | 21.28 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 967 | 21.30 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 969 | 21.31 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 987 | 21.32 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |