Os12g0611300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Patatin family protein.
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Os12g0611300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Patatin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.3 | 0.688 | 8.23 | -0.0529 | 1.43 | 1.95 | 1.15 | 1.73 | 0.0515 | 8.31 | 31.17 | 247 | -- | -- |
| 217.09 | 0.686 | 8.2 | 0.23 | 1.43 | 1.96 | 1.24 | -- | 0.115 | 8.23 | 31.58 | 250 | -- | -- |
| 218.28 | 0.688 | 8.24 | -0.042 | 1.42 | 1.99 | -- | 1.94 | 0.0451 | 8.33 | 31.37 | 251 | -- | -- |
| 221.87 | 0.694 | 8.2 | 0.275 | 1.42 | 2.04 | -- | -- | 0.125 | 8.29 | 31.96 | 251 | -- | -- |
| 295.79 | 0.801 | 8.24 | 0.13 | -- | 3.02 | -- | 2.18 | 0.172 | -- | 32.33 | 445 | -- | -- |
| 263.07 | 0.76 | 8.27 | -0.235 | 1.82 | -- | 1.74 | -- | -0.218 | 7.17 | -- | -- | -- | -- |
| 271.14 | 0.771 | 8.27 | -0.198 | 1.83 | -- | -- | -- | -0.221 | 7.19 | -- | -- | -- | -- |
| 300.01 | 0.807 | 8.21 | 0.511 | -- | 3.11 | -- | -- | 0.254 | -- | 37.93 | 459 | -- | -- |
| 223.74 | 0.697 | 8.21 | -- | 1.43 | 1.96 | -- | -- | 0.0641 | 8.27 | 32.25 | 250 | -- | -- |
| 447.29 | 0.988 | 8.31 | -0.165 | -- | -- | -- | -- | -0.189 | -- | -- | -- | -- | -- |
| 272.18 | 0.772 | 8.26 | -- | 1.82 | -- | -- | -- | -0.199 | 7.2 | -- | -- | -- | -- |
| 306.36 | 0.815 | 8.23 | -- | -- | 2.94 | -- | -- | 0.176 | -- | 55.71 | 455 | -- | -- |
| 448.01 | 0.988 | 8.3 | -- | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 203.20 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 2 | 203.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 9 | 204.62 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 50 | 209.91 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 52 | 210.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 20 |
| 89 | 211.94 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 21 |
| 145 | 213.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 157 | 214.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 170 | 214.64 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 182 | 214.88 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 217 | 216.08 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 20 |
| 237 | 216.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 20 |
| 255 | 216.90 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 280 | 217.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 316 | 218.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 365 | 218.86 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 527 | 220.96 | temperature | 25 | 270 | > th | dose independent | rect. | 19 | 22 |
| 533 | 220.99 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 537 | 221.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 582 | 221.26 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 588 | 221.27 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 611 | 221.39 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 10 |
| 620 | 221.43 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 639 | 221.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 659 | 221.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 672 | 221.63 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 6 |
| 706 | 221.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 720 | 221.82 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 761 | 221.97 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 762 | 221.97 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 12 |
| 768 | 221.99 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 791 | 222.08 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 796 | 222.09 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 16 |
| 821 | 222.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 848 | 222.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 870 | 222.26 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 881 | 222.28 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 928 | 222.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 959 | 222.44 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 997 | 222.53 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |