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Os12g0609200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0328) R2 : 0.504
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.852 (0.0784) R2dC : 0.13 R2C : 0.0964
β3 : -1.8 (0.115) R2dE : 0.275 R2E : 0.182
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.82 (0.0697) R2dN8 : 0.201 R2N8 : 0.0885
σ : 0.613
deviance : 173.35
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_____
C
peak time of C : 22.8
E
wheather : temperature
threshold : 23.54
memory length : 254
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
171.62 0.616 10.4 -0.102 0.886 -1.71 0.606 -0.0659 0.797 23.1 23.57 277 -- --
171.62 0.61 10.4 -0.0926 0.888 -1.72 0.604 -- 0.8 23.1 23.51 278 -- --
173.1 0.613 10.4 -0.134 0.873 -1.75 -- -0.178 0.795 22.9 23.58 268 -- --
173.07 0.613 10.4 -0.105 0.855 -1.77 -- -- 0.803 22.9 23.6 254 -- --
193.79 0.648 10.4 -0.00145 -- -2.25 -- 0.593 0.856 -- 24.5 18 -- --
221.2 0.697 10.5 -0.41 1.18 -- 1.28 -- 0.581 1.88 -- -- -- --
227.4 0.706 10.5 -0.448 1.18 -- -- -- 0.575 1.74 -- -- -- --
193.7 0.648 10.4 -0.0823 -- -2.19 -- -- 0.813 -- 24.5 18 -- --
173.35 0.613 10.4 -- 0.852 -1.8 -- -- 0.82 22.8 23.54 254 -- --
311.71 0.825 10.4 -0.4 -- -- -- -- 0.601 -- -- -- -- --
232.7 0.714 10.5 -- 1.17 -- -- -- 0.625 1.72 -- -- -- --
193.88 0.649 10.4 -- -- -2.21 -- -- 0.821 -- 24.5 18 -- --
315.93 0.83 10.4 -- -- -- -- -- 0.646 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 155.03 humidity 80 43200 > th dose dependent rect. 11 20
10 155.71 humidity 80 43200 > th dose dependent rect. 21 19
31 156.39 humidity 80 43200 > th dose dependent sin 15 NA
73 157.22 humidity 80 43200 > th dose dependent rect. 15 12
105 157.82 humidity 80 43200 > th dose dependent sin 6 NA
112 157.99 humidity 90 43200 < th dose independent rect. 17 12
114 158.01 humidity 80 43200 > th dose dependent rect. 17 9
117 158.06 humidity 90 43200 < th dose independent rect. 21 6
120 158.11 humidity 90 43200 < th dose independent rect. 14 15
124 158.22 humidity 90 43200 < th dose independent rect. 21 11
156 158.94 humidity 90 43200 < th dose independent sin 11 NA
168 159.11 humidity 90 43200 < th dose independent rect. 20 8
178 159.30 humidity 80 43200 > th dose dependent no NA NA
191 159.45 humidity 80 43200 > th dose dependent rect. 18 7
208 159.71 humidity 80 43200 > th dose dependent rect. 21 2
217 159.96 humidity 90 43200 > th dose independent rect. 1 1
237 160.39 humidity 90 43200 > th dose independent rect. 24 8
245 160.55 humidity 90 43200 > th dose independent rect. 22 5
250 160.75 humidity 90 43200 < th dose independent rect. 14 1
253 160.83 humidity 90 43200 > th dose independent rect. 13 16
277 161.39 humidity 80 43200 > th dose dependent rect. 20 4
335 162.10 humidity 80 43200 > th dose dependent rect. 2 23
337 162.15 wind 7 43200 > th dose independent rect. 6 1
338 162.17 temperature 15 43200 < th dose dependent rect. 1 7
344 162.26 temperature 15 43200 < th dose dependent rect. 23 17
358 162.32 temperature 15 43200 < th dose dependent rect. 1 12
381 162.38 temperature 15 43200 < th dose dependent sin 7 NA
400 162.45 temperature 15 43200 < th dose dependent rect. 3 4
410 162.48 temperature 15 43200 < th dose dependent rect. 21 12
419 162.50 temperature 15 43200 < th dose dependent rect. 12 18
518 162.75 temperature 15 43200 < th dose dependent rect. 5 1
552 162.84 humidity 90 43200 > th dose independent sin 12 NA
598 162.96 temperature 15 43200 < th dose dependent no NA NA
627 163.09 temperature 15 43200 < th dose dependent rect. 1 23
662 163.26 temperature 15 43200 < th dose dependent rect. 3 23
697 163.48 wind 9 43200 > th dose dependent rect. 18 14
707 163.54 humidity 80 43200 > th dose independent rect. 2 16
713 163.61 humidity 90 43200 < th dose independent rect. 1 1
788 164.34 humidity 80 43200 > th dose independent rect. 3 14
797 164.45 humidity 90 43200 < th dose independent rect. 23 16
832 164.85 wind 7 43200 < th dose independent rect. 6 1
887 165.39 humidity 90 43200 < th dose independent rect. 21 18
889 165.40 temperature 15 43200 > th dose independent rect. 24 1
899 165.54 temperature 15 43200 < th dose independent rect. 24 1
906 165.62 humidity 90 43200 > th dose dependent rect. 24 1
912 165.68 temperature 15 43200 < th dose independent rect. 20 12
920 165.70 wind 9 43200 > th dose independent rect. 18 15
922 165.71 temperature 15 43200 < th dose independent rect. 24 9
927 165.75 temperature 15 43200 > th dose independent rect. 20 6
932 165.76 temperature 15 43200 < th dose independent rect. 20 8
948 165.85 temperature 15 43200 > th dose independent rect. 22 4
952 165.87 temperature 15 43200 > th dose independent rect. 19 9
956 165.88 temperature 15 43200 < th dose independent rect. 24 15
961 165.90 temperature 15 43200 < th dose independent sin 10 NA
987 165.94 temperature 15 43200 < th dose independent rect. 20 19
997 165.96 humidity 80 43200 < th dose independent rect. 2 16