Os12g0604200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pleckstrin-like, plant domain containing protein.
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Os12g0604200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pleckstrin-like, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.7 | 0.599 | 8.13 | 0.265 | 0.0986 | 1.25 | 1.36 | -1.07 | -0.582 | 3.95 | 20.7 | 9 | -- | -- |
| 163.42 | 0.595 | 8.11 | 0.445 | 0.0871 | 1.21 | 1.63 | -- | -0.534 | 3.67 | 20.4 | 8 | -- | -- |
| 166.93 | 0.602 | 8.15 | 0.0965 | 0.0423 | 1.22 | -- | -2.04 | -0.636 | 2.18 | 20.74 | 8 | -- | -- |
| 171.26 | 0.609 | 8.11 | 0.446 | 0.088 | 1.09 | -- | -- | -0.52 | 6.6 | 20.45 | 8 | -- | -- |
| 166.96 | 0.602 | 8.16 | 0.0852 | -- | 1.18 | -- | -2.23 | -0.624 | -- | 20.8 | 8 | -- | -- |
| 184.48 | 0.637 | 8.07 | 0.708 | 0.378 | -- | -1.16 | -- | -0.326 | 14.3 | -- | -- | -- | -- |
| 189.16 | 0.644 | 8.07 | 0.675 | 0.376 | -- | -- | -- | -0.334 | 13.6 | -- | -- | -- | -- |
| 171.63 | 0.61 | 8.11 | 0.456 | -- | 1.06 | -- | -- | -0.514 | -- | 20.4 | 8 | -- | -- |
| 175.8 | 0.618 | 8.13 | -- | 0.102 | 1.31 | -- | -- | -0.6 | 5.32 | 18 | 8 | -- | -- |
| 197.79 | 0.657 | 8.07 | 0.66 | -- | -- | -- | -- | -0.342 | -- | -- | -- | -- | -- |
| 201.18 | 0.663 | 8.09 | -- | 0.364 | -- | -- | -- | -0.409 | 13.6 | -- | -- | -- | -- |
| 176.34 | 0.618 | 8.13 | -- | -- | 1.28 | -- | -- | -0.583 | -- | 17.4 | 8 | -- | -- |
| 209.29 | 0.675 | 8.09 | -- | -- | -- | -- | -- | -0.415 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 159.12 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 2 | 159.48 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 11 |
| 6 | 160.08 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 19 | 161.19 | temperature | 25 | 30 | > th | dose independent | rect. | 23 | 21 |
| 21 | 161.26 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 17 |
| 28 | 161.61 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 32 | 161.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 37 | 162.01 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 19 |
| 43 | 162.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 51 | 162.33 | temperature | 25 | 30 | < th | dose independent | rect. | 18 | 23 |
| 55 | 162.43 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 66 | 162.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 71 | 162.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 89 | 162.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 21 |
| 97 | 163.03 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 98 | 163.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 99 | 163.06 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 100 | 163.06 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 110 | 163.18 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 19 |
| 118 | 163.22 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 21 |
| 124 | 163.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 14 | 23 |
| 128 | 163.32 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 135 | 163.36 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 148 | 163.44 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 152 | 163.46 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 155 | 163.47 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 21 |
| 168 | 163.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 177 | 163.54 | temperature | 25 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 178 | 163.54 | temperature | 25 | 1440 | < th | dose independent | rect. | 21 | 23 |
| 195 | 163.60 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 197 | 163.60 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 198 | 163.61 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 200 | 163.62 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 19 |
| 210 | 163.64 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 211 | 163.65 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 11 |
| 215 | 163.66 | temperature | 25 | 1440 | < th | dose independent | sin | 14 | NA |
| 219 | 163.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 244 | 163.72 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 11 |
| 252 | 163.73 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 263 | 163.76 | temperature | 25 | 1440 | > th | dose independent | rect. | 4 | 22 |
| 276 | 163.80 | temperature | 25 | 30 | > th | dose independent | rect. | 6 | 14 |
| 285 | 163.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 293 | 163.83 | temperature | 20 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 312 | 163.87 | temperature | 25 | 1440 | > th | dose independent | sin | 15 | NA |
| 328 | 163.89 | temperature | 25 | 90 | < th | dose independent | rect. | 11 | 23 |
| 331 | 163.90 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 350 | 163.93 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 354 | 163.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 381 | 163.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 5 |
| 435 | 164.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 444 | 164.11 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 13 |
| 477 | 164.17 | temperature | 20 | 90 | > th | dose dependent | sin | 7 | NA |
| 534 | 164.27 | temperature | 20 | 10 | > th | dose dependent | sin | 6 | NA |
| 543 | 164.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 595 | 164.37 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 627 | 164.44 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 22 |
| 641 | 164.47 | temperature | 20 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 645 | 164.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 646 | 164.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 664 | 164.50 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 23 |
| 666 | 164.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 701 | 164.55 | temperature | 25 | 30 | < th | dose independent | rect. | 3 | 23 |
| 713 | 164.57 | temperature | 25 | 1440 | < th | dose independent | sin | 6 | NA |
| 744 | 164.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 18 |
| 772 | 164.65 | temperature | 25 | 90 | < th | dose independent | rect. | 7 | 23 |
| 840 | 164.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 875 | 164.80 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 907 | 164.85 | temperature | 20 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 921 | 164.88 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 926 | 164.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 970 | 164.96 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |