Os12g0596800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin interacting motif domain containing protein.
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Os12g0596800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin interacting motif domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.17 | 0.29 | 10.2 | -1.12 | 1.06 | -0.673 | -0.263 | 0.136 | -0.011 | 1.49 | 22.98 | 715 | -- | -- |
| 38.19 | 0.288 | 10.2 | -1.11 | 1.05 | -0.701 | -0.278 | -- | -0.00751 | 1.49 | 22.9 | 722 | -- | -- |
| 38.42 | 0.289 | 10.2 | -1.13 | 1.05 | -0.654 | -- | 0.24 | -0.00479 | 1.46 | 22.9 | 740 | -- | -- |
| 38.5 | 0.289 | 10.2 | -1.1 | 1.05 | -0.705 | -- | -- | -0.00632 | 1.49 | 22.89 | 725 | -- | -- |
| 99.23 | 0.464 | 10.3 | -1.3 | -- | -1.07 | -- | 0.559 | -0.155 | -- | 27.24 | 961 | -- | -- |
| 44.2 | 0.312 | 10.2 | -0.928 | 1.1 | -- | -0.319 | -- | 0.101 | 1.31 | -- | -- | -- | -- |
| 44.62 | 0.313 | 10.2 | -0.917 | 1.1 | -- | -- | -- | 0.103 | 1.29 | -- | -- | -- | -- |
| 99.14 | 0.464 | 10.2 | -1.21 | -- | -1.14 | -- | -- | -0.143 | -- | 26.7 | 959 | -- | -- |
| 66.76 | 0.383 | 10.2 | -- | 1.08 | 0.0409 | -- | -- | 0.213 | 1.26 | 26.4 | 56 | -- | -- |
| 119.72 | 0.511 | 10.2 | -0.874 | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
| 66.79 | 0.382 | 10.2 | -- | 1.09 | -- | -- | -- | 0.205 | 1.26 | -- | -- | -- | -- |
| 118.05 | 0.506 | 10.1 | -- | -- | 1.2 | -- | -- | 0.359 | -- | 46.08 | 2 | -- | -- |
| 139.89 | 0.552 | 10.1 | -- | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.46 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 7 | 36.05 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 12 |
| 14 | 36.24 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 32 | 36.47 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 52 | 36.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 13 |
| 66 | 36.67 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 81 | 36.76 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 18 |
| 90 | 36.81 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 14 |
| 93 | 36.81 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 99 | 36.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 8 |
| 100 | 36.85 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 10 |
| 112 | 36.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 8 |
| 128 | 36.91 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 139 | 36.93 | temperature | 20 | 720 | < th | dose independent | sin | 7 | NA |
| 148 | 36.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 221 | 37.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 232 | 37.08 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 321 | 37.16 | temperature | 20 | 1440 | < th | dose dependent | rect. | 2 | 2 |
| 339 | 37.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 4 |
| 393 | 37.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 416 | 37.27 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 430 | 37.29 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 4 |
| 507 | 37.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 575 | 37.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 600 | 37.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 4 |
| 642 | 37.49 | humidity | 50 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 674 | 37.51 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 19 |
| 712 | 37.54 | humidity | 50 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 782 | 37.59 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 926 | 37.69 | humidity | 50 | 14400 | > th | dose dependent | rect. | 22 | 7 |