Os12g0595500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0595500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.63 | 0.474 | 7.41 | 2.36 | 0.785 | -2.56 | -1.07 | 0.869 | 0.77 | 23.7 | 27.44 | 108 | -- | -- |
| 102.46 | 0.471 | 7.39 | 2.51 | 0.754 | -2.58 | -0.856 | -- | 0.8 | 23.6 | 27.17 | 120 | -- | -- |
| 105.82 | 0.479 | 7.41 | 2.47 | 0.808 | -2.61 | -- | 0.277 | 0.773 | 23.6 | 27.37 | 104 | -- | -- |
| 105.67 | 0.479 | 7.39 | 2.54 | 0.799 | -2.6 | -- | -- | 0.804 | 23.6 | 27.27 | 104 | -- | -- |
| 113.94 | 0.497 | 7.41 | 2.25 | -- | -2.45 | -- | 1.42 | 0.756 | -- | 27.75 | 524 | -- | -- |
| 198.36 | 0.66 | 7.26 | 3.18 | 0.63 | -- | -0.709 | -- | 1.37 | 20 | -- | -- | -- | -- |
| 199.68 | 0.662 | 7.26 | 3.2 | 0.637 | -- | -- | -- | 1.37 | 19.7 | -- | -- | -- | -- |
| 115.73 | 0.501 | 7.37 | 2.53 | -- | -2.5 | -- | -- | 0.816 | -- | 27.24 | 481 | -- | -- |
| 257.17 | 0.747 | 7.49 | -- | 0.814 | -3.68 | -- | -- | 0.327 | 1.29 | 27.37 | 218 | -- | -- |
| 221.54 | 0.695 | 7.25 | 3.19 | -- | -- | -- | -- | 1.36 | -- | -- | -- | -- | -- |
| 469.04 | 1.01 | 7.34 | -- | 0.614 | -- | -- | -- | 1.01 | 20 | -- | -- | -- | -- |
| 140.56 | 0.552 | 7.48 | -- | -- | -3.2 | -- | -- | 0.343 | -- | 20.75 | 28093 | -- | -- |
| 489.68 | 1.03 | 7.33 | -- | -- | -- | -- | -- | 1.01 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 6 | 103.60 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 27 | 104.97 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 63 | 105.58 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 79 | 105.73 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 80 | 105.74 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 195 | 106.88 | temperature | 25 | 4320 | < th | dose dependent | sin | 13 | NA |
| 214 | 107.01 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 237 | 107.20 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 409 | 108.23 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 415 | 108.25 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 441 | 108.36 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 525 | 108.72 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 21 |
| 586 | 108.99 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 698 | 109.40 | humidity | 70 | 43200 | < th | dose dependent | rect. | 23 | 12 |
| 704 | 109.42 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 739 | 109.53 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 803 | 109.74 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 835 | 109.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 862 | 109.94 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 902 | 110.05 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 982 | 110.26 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 12 |