Os12g0591300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os12g0591300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.72 | 0.398 | 2.95 | -0.0821 | 0.117 | 0.539 | -0.0944 | -1.59 | 0.0193 | 9.59 | 1.159 | 15 | -- | -- |
| 72.61 | 0.397 | 2.94 | -0.0604 | 0.13 | 0.366 | -0.0588 | -- | 0.0263 | 9.1 | 1.2 | 15 | -- | -- |
| 71.75 | 0.395 | 2.95 | -0.085 | 0.118 | 0.535 | -- | -1.54 | 0.019 | 9.72 | 1.176 | 14 | -- | -- |
| 72.61 | 0.397 | 2.95 | -0.0604 | 0.127 | 0.365 | -- | -- | 0.023 | 9.32 | 1.201 | 14 | -- | -- |
| 72.57 | 0.397 | 2.96 | -0.0891 | -- | 0.547 | -- | -1.64 | 0.0191 | -- | 1.18 | 14 | -- | -- |
| 73.66 | 0.402 | 2.95 | -0.035 | 0.148 | -- | -0.131 | -- | 0.0168 | 7.85 | -- | -- | -- | -- |
| 73.71 | 0.402 | 2.95 | -0.0383 | 0.147 | -- | -- | -- | 0.017 | 7.97 | -- | -- | -- | -- |
| 73.55 | 0.399 | 2.95 | -0.0635 | -- | 0.365 | -- | -- | 0.0274 | -- | 1.279 | 15 | -- | -- |
| 72.7 | 0.397 | 2.94 | -- | 0.128 | 0.353 | -- | -- | 0.0296 | 9.32 | 1.2 | 14 | -- | -- |
| 74.9 | 0.404 | 2.95 | -0.0368 | -- | -- | -- | -- | 0.019 | -- | -- | -- | -- | -- |
| 73.75 | 0.402 | 2.95 | -- | 0.147 | -- | -- | -- | 0.0213 | 7.99 | -- | -- | -- | -- |
| 73.66 | 0.4 | 2.95 | -- | -- | 0.358 | -- | -- | 0.0311 | -- | 1.241 | 14 | -- | -- |
| 74.93 | 0.404 | 2.95 | -- | -- | -- | -- | -- | 0.023 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.72 | humidity | 70 | 30 | < th | dose dependent | rect. | 9 | 2 |
| 3 | 65.80 | humidity | 60 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 7 | 65.97 | humidity | 60 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 10 | 66.15 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 13 | 66.20 | radiation | 40 | 30 | > th | dose dependent | rect. | 14 | 21 |
| 14 | 66.21 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 2 |
| 36 | 66.31 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 39 | 66.38 | humidity | 60 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 53 | 66.44 | humidity | 60 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 85 | 66.51 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 3 |
| 100 | 66.53 | humidity | 60 | 90 | < th | dose independent | rect. | 17 | 17 |
| 103 | 66.55 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 126 | 66.58 | humidity | 60 | 10 | < th | dose independent | rect. | 17 | 17 |
| 128 | 66.58 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 11 |
| 142 | 66.61 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 201 | 66.64 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 428 | 66.70 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 440 | 66.79 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 446 | 66.81 | radiation | 40 | 30 | > th | dose independent | rect. | 14 | 21 |
| 450 | 66.84 | radiation | 40 | 30 | > th | dose independent | rect. | 9 | 2 |
| 487 | 66.90 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 547 | 66.99 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 9 |
| 780 | 67.53 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 820 | 67.56 | wind | 1 | 10 | < th | dose dependent | sin | 22 | NA |