Os12g0591100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
FiT-DB / Search/ Help/ Sample detail
|
Os12g0591100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description :
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 155.57 | 0.586 | 4.58 | -0.529 | 0.474 | -1.31 | 0.108 | 0.324 | -0.757 | 8.55 | 21.8 | 807 | -- | -- |
| 155.79 | 0.581 | 4.59 | -0.604 | 0.477 | -1.33 | -0.014 | -- | -0.773 | 8.5 | 21.71 | 832 | -- | -- |
| 155.6 | 0.581 | 4.58 | -0.538 | 0.473 | -1.31 | -- | 0.281 | -0.76 | 8.57 | 21.77 | 807 | -- | -- |
| 155.79 | 0.581 | 4.59 | -0.612 | 0.479 | -1.32 | -- | -- | -0.777 | 8.5 | 21.73 | 831 | -- | -- |
| 167.48 | 0.603 | 4.58 | -0.499 | -- | -1.39 | -- | 0.371 | -0.718 | -- | 21.9 | 778 | -- | -- |
| 221.52 | 0.698 | 4.67 | -1.1 | 0.717 | -- | -0.0483 | -- | -1.18 | 9.1 | -- | -- | -- | -- |
| 221.53 | 0.697 | 4.67 | -1.1 | 0.717 | -- | -- | -- | -1.18 | 9.09 | -- | -- | -- | -- |
| 167.66 | 0.603 | 4.6 | -0.575 | -- | -1.44 | -- | -- | -0.739 | -- | 21.7 | 792 | -- | -- |
| 164.58 | 0.597 | 4.57 | -- | 0.461 | -1.48 | -- | -- | -0.672 | 8.38 | 21.8 | 864 | -- | -- |
| 251.17 | 0.741 | 4.69 | -1.1 | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
| 253.58 | 0.745 | 4.65 | -- | 0.716 | -- | -- | -- | -1.05 | 9.21 | -- | -- | -- | -- |
| 175.64 | 0.617 | 4.57 | -- | -- | -1.57 | -- | -- | -0.64 | -- | 21.79 | 807 | -- | -- |
| 283.34 | 0.786 | 4.67 | -- | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 17 |
| 13 | 161.04 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 31 | 161.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 62 | 162.42 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 72 | 162.77 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 78 | 162.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 111 | 164.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 112 | 164.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 9 |
| 141 | 165.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 170 | 166.38 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 174 | 166.47 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 194 | 167.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 207 | 167.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 216 | 167.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 287 | 168.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 327 | 168.78 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 21 |
| 345 | 168.92 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 22 |
| 363 | 169.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 390 | 169.32 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 12 |
| 392 | 169.33 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 404 | 169.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 421 | 169.56 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 436 | 169.69 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 14 |
| 465 | 169.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 470 | 169.97 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 16 |
| 494 | 170.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 503 | 170.19 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 10 |
| 510 | 170.27 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 579 | 170.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 615 | 170.91 | temperature | 20 | 720 | < th | dose independent | rect. | 10 | 21 |
| 618 | 170.92 | temperature | 20 | 720 | > th | dose independent | sin | 10 | NA |
| 655 | 171.09 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 694 | 171.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 727 | 171.42 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 744 | 171.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 766 | 171.57 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 22 |
| 783 | 171.63 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 23 |
| 787 | 171.65 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 788 | 171.65 | temperature | 20 | 720 | < th | dose independent | rect. | 14 | 17 |
| 831 | 171.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 836 | 171.82 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 860 | 171.93 | temperature | 20 | 720 | < th | dose independent | rect. | 16 | 21 |
| 866 | 171.96 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 960 | 172.27 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 969 | 172.30 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 12 |
| 987 | 172.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |