Os12g0583400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0583400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.97 | 0.304 | 14 | -1.01 | 1.11 | 0.501 | -0.2 | -4.82 | -0.116 | 22.7 | 24.99 | 3688 | -- | -- |
| 47.28 | 0.323 | 13.9 | 0.0517 | 1.2 | 0.34 | -0.315 | -- | 0.0859 | 22.9 | 12.14 | 15243 | -- | -- |
| 42.13 | 0.302 | 14 | -1.02 | 1.11 | 0.507 | -- | -4.89 | -0.118 | 22.8 | 24.99 | 3678 | -- | -- |
| 47.69 | 0.324 | 13.9 | 0.061 | 1.2 | 0.357 | -- | -- | 0.0844 | 23 | 11.37 | 22526 | -- | -- |
| 111.92 | 0.493 | 14 | -1.18 | -- | 0.828 | -- | -4.74 | -0.177 | -- | 24.3 | 2272 | -- | -- |
| 48.38 | 0.326 | 13.9 | 0.116 | 1.14 | -- | -0.358 | -- | 0.133 | 22.7 | -- | -- | -- | -- |
| 48.91 | 0.328 | 13.9 | 0.13 | 1.14 | -- | -- | -- | 0.134 | 22.7 | -- | -- | -- | -- |
| 122.56 | 0.518 | 13.9 | 0.225 | -- | -0.51 | -- | -- | 0.192 | -- | 24.3 | 2272 | -- | -- |
| 47.76 | 0.324 | 13.9 | -- | 1.21 | 0.389 | -- | -- | 0.0732 | 23 | 4.159 | 47520 | -- | -- |
| 129.08 | 0.531 | 13.9 | 0.153 | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
| 49.36 | 0.329 | 13.9 | -- | 1.14 | -- | -- | -- | 0.12 | 22.7 | -- | -- | -- | -- |
| 110.85 | 0.49 | 13.9 | -- | -- | 0.822 | -- | -- | 0.0279 | -- | 22.7 | 818 | -- | -- |
| 129.69 | 0.532 | 13.9 | -- | -- | -- | -- | -- | 0.124 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.97 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 2 | 40.02 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 16 | 9 |
| 3 | 40.18 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 5 |
| 5 | 40.30 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 23 | 2 |
| 6 | 40.31 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 9 | 40.43 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 16 | 40.59 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 38 | 40.78 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 39 | 40.80 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 77 | 40.97 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 79 | 40.98 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 4 |
| 82 | 41.00 | radiation | 10.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 83 | 41.00 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 107 | 41.14 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 115 | 41.15 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 131 | 41.16 | radiation | 20.0 | 30 | < th | dose dependent | sin | 10 | NA |
| 143 | 41.22 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 207 | 41.30 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 4 |
| 220 | 41.33 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 336 | 41.41 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 344 | 41.42 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 347 | 41.43 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 359 | 41.43 | radiation | 20.0 | 43200 | < th | dose dependent | sin | 5 | NA |
| 362 | 41.43 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 364 | 41.44 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 370 | 41.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 377 | 41.46 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 381 | 41.46 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 408 | 41.49 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 428 | 41.50 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 492 | 41.53 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 498 | 41.53 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |
| 502 | 41.54 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 505 | 41.54 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 518 | 41.55 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 521 | 41.55 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 552 | 41.57 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 558 | 41.57 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 611 | 41.59 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 682 | 41.62 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 19 |
| 685 | 41.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 746 | 41.65 | radiation | 40.0 | 270 | < th | dose independent | rect. | 8 | 19 |
| 747 | 41.65 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 792 | 41.67 | radiation | 20.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 793 | 41.67 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 801 | 41.67 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 806 | 41.68 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 813 | 41.68 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 835 | 41.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 836 | 41.69 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 846 | 41.69 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 4 |
| 852 | 41.70 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 859 | 41.70 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 990 | 41.75 | radiation | 20.0 | 43200 | > th | dose independent | no | NA | NA |