Os12g0582900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AP2 domain containing protein RAP2.11 (Fragment).
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Os12g0582900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AP2 domain containing protein RAP2.11 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.76 | 0.577 | 2.91 | 0.0227 | 0.164 | -3.96 | -0.23 | -8.32 | 0.0315 | 14.4 | 8.908 | 26 | -- | -- |
| 153.07 | 0.576 | 2.87 | -0.019 | 0.138 | -1.82 | -0.000858 | -- | 0.0417 | 15.5 | 8.8 | 27 | -- | -- |
| 150.9 | 0.572 | 2.91 | 0.0177 | 0.161 | -3.9 | -- | -7.92 | 0.0317 | 13.8 | 8.901 | 26 | -- | -- |
| 152.75 | 0.576 | 2.89 | -0.0226 | 0.158 | -1.81 | -- | -- | 0.0311 | 14 | 8.8 | 25 | -- | -- |
| 152.47 | 0.575 | 2.91 | 0.0172 | -- | -4.02 | -- | -7.95 | 0.0301 | -- | 8.914 | 26 | -- | -- |
| 160.79 | 0.594 | 2.89 | -0.126 | 0.218 | -- | -0.341 | -- | -0.000704 | 14.8 | -- | -- | -- | -- |
| 161.11 | 0.594 | 2.89 | -0.134 | 0.217 | -- | -- | -- | -0.0031 | 14.1 | -- | -- | -- | -- |
| 152.28 | 0.575 | 2.88 | -0.0363 | -- | -2.2 | -- | -- | 0.0195 | -- | 8.9 | 18 | -- | -- |
| 152.74 | 0.576 | 2.88 | -- | 0.162 | -1.82 | -- | -- | 0.0402 | 13.7 | 8.868 | 28 | -- | -- |
| 163.93 | 0.598 | 2.89 | -0.143 | -- | -- | -- | -- | -0.00828 | -- | -- | -- | -- | -- |
| 161.58 | 0.595 | 2.89 | -- | 0.22 | -- | -- | -- | 0.0118 | 14.2 | -- | -- | -- | -- |
| 152.24 | 0.575 | 2.88 | -- | -- | -2.29 | -- | -- | 0.0417 | -- | 8.882 | 18 | -- | -- |
| 164.47 | 0.599 | 2.89 | -- | -- | -- | -- | -- | 0.0076 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.16 | wind | 9 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 31 | 143.97 | radiation | 1 | 90 | < th | dose dependent | rect. | 13 | 3 |
| 59 | 144.18 | wind | 9 | 30 | > th | dose dependent | sin | 6 | NA |
| 62 | 144.64 | wind | 9 | 30 | > th | dose dependent | rect. | 18 | 18 |
| 83 | 145.59 | wind | 9 | 30 | > th | dose independent | rect. | 11 | 1 |
| 85 | 145.61 | wind | 9 | 30 | < th | dose independent | sin | 5 | NA |
| 93 | 146.00 | radiation | 1 | 90 | < th | dose independent | rect. | 13 | 3 |
| 144 | 146.66 | radiation | 1 | 90 | < th | dose independent | rect. | 14 | 1 |
| 171 | 147.25 | wind | 9 | 30 | > th | dose independent | sin | 5 | NA |
| 182 | 147.85 | humidity | 90 | 270 | > th | dose dependent | rect. | 11 | 2 |
| 183 | 147.86 | humidity | 90 | 270 | > th | dose independent | rect. | 11 | 2 |
| 185 | 147.94 | wind | 9 | 30 | > th | dose independent | rect. | 18 | 20 |
| 192 | 148.09 | wind | 9 | 30 | > th | dose independent | rect. | 18 | 18 |
| 279 | 148.76 | radiation | 10 | 10 | < th | dose independent | rect. | 12 | 1 |
| 332 | 149.60 | radiation | 10 | 270 | < th | dose dependent | rect. | 8 | 21 |
| 361 | 150.05 | radiation | 10 | 270 | < th | dose dependent | rect. | 19 | 21 |
| 393 | 150.41 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 2 |
| 420 | 150.79 | radiation | 20 | 10 | < th | dose dependent | rect. | 11 | 5 |
| 421 | 150.81 | humidity | 80 | 90 | > th | dose dependent | rect. | 14 | 2 |
| 510 | 151.29 | temperature | 25 | 90 | < th | dose independent | rect. | 14 | 1 |
| 558 | 151.79 | radiation | 20 | 10 | < th | dose independent | rect. | 11 | 5 |
| 573 | 151.93 | humidity | 80 | 90 | > th | dose independent | rect. | 15 | 1 |
| 577 | 151.96 | wind | 9 | 30 | < th | dose independent | no | NA | NA |
| 604 | 152.22 | radiation | 10 | 270 | < th | dose independent | rect. | 9 | 20 |
| 625 | 152.44 | radiation | 10 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 631 | 152.52 | radiation | 10 | 270 | < th | dose dependent | no | NA | NA |
| 772 | 153.12 | radiation | 20 | 10 | < th | dose independent | rect. | 11 | 19 |
| 798 | 153.21 | radiation | 20 | 90 | < th | dose independent | rect. | 11 | 19 |
| 869 | 153.36 | humidity | 80 | 10 | > th | dose independent | rect. | 14 | 2 |
| 931 | 153.47 | wind | 9 | 30 | > th | dose independent | no | NA | NA |
| 972 | 153.47 | wind | 9 | 30 | > th | dose independent | rect. | 13 | 23 |