Os12g0576300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0576300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 115.74 | 0.505 | 9.06 | -2.6 | 1.88 | 1.77 | -0.485 | -0.972 | -0.858 | 3.26 | 16 | 638 | -- | -- |
| 116.53 | 0.503 | 9.04 | -2.43 | 1.87 | 1.75 | -0.414 | -- | -0.813 | 3.24 | 15.81 | 646 | -- | -- |
| 116.49 | 0.503 | 9.06 | -2.59 | 1.88 | 1.77 | -- | -0.955 | -0.858 | 3.26 | 16.1 | 637 | -- | -- |
| 117.2 | 0.504 | 9.03 | -2.41 | 1.9 | 1.8 | -- | -- | -0.809 | 3.26 | 15.61 | 616 | -- | -- |
| 254.54 | 0.743 | 9.08 | -2.74 | -- | 2.3 | -- | -0.9 | -0.922 | -- | 13 | 1063 | -- | -- |
| 158.18 | 0.59 | 8.98 | -1.98 | 1.76 | -- | -0.574 | -- | -0.527 | 2.31 | -- | -- | -- | -- |
| 159.39 | 0.591 | 8.98 | -1.96 | 1.76 | -- | -- | -- | -0.524 | 2.3 | -- | -- | -- | -- |
| 254.97 | 0.744 | 9.06 | -2.55 | -- | 2.17 | -- | -- | -0.873 | -- | 15.88 | 1063 | -- | -- |
| 249.26 | 0.735 | 8.96 | -- | 1.93 | 0.736 | -- | -- | -0.416 | 2.71 | 21.3 | 363 | -- | -- |
| 342.27 | 0.864 | 8.97 | -1.89 | -- | -- | -- | -- | -0.481 | -- | -- | -- | -- | -- |
| 260.76 | 0.755 | 8.93 | -- | 1.72 | -- | -- | -- | -0.306 | 2.28 | -- | -- | -- | -- |
| 402.97 | 0.935 | 8.96 | -- | -- | 1.01 | -- | -- | -0.446 | -- | 21.36 | 1071 | -- | -- |
| 436.22 | 0.975 | 8.92 | -- | -- | -- | -- | -- | -0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.85 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 3 | 107.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 15 |
| 88 | 110.09 | temperature | 30 | 720 | < th | dose dependent | sin | 6 | NA |
| 104 | 110.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 17 |
| 209 | 112.27 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 277 | 113.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 370 | 114.72 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 463 | 115.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 511 | 116.15 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 610 | 116.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 15 |
| 631 | 117.10 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 640 | 117.16 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 653 | 117.20 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 661 | 117.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 707 | 117.46 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 718 | 117.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 778 | 117.77 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 878 | 118.10 | temperature | 25 | 1440 | > th | dose independent | rect. | 1 | 21 |
| 882 | 118.11 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 17 |
| 915 | 118.22 | temperature | 25 | 1440 | < th | dose independent | rect. | 1 | 21 |