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Os12g0568800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Importin-beta2 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0112) R2 : 0.489
β1 : 0.814 (0.0411) R2dD : 0.455 R2D : 0.477
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0671 (0.024) R2dN8 : 0.0118 R2N8 : 0.0336
σ : 0.211
deviance : 20.36
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.8 0.168 11.4 0.891 0.274 0.296 0.0323 1.24 -0.0957 7.44 70 6257 -- --
14.66 0.178 11.4 0.818 0.278 0.406 -0.045 -- -0.091 7.81 69 5335 -- --
12.8 0.167 11.4 0.891 0.274 0.296 -- 1.24 -0.0959 7.41 70 6257 -- --
14.66 0.178 11.4 0.822 0.276 0.414 -- -- -0.0898 7.87 69 5335 -- --
16.24 0.188 11.4 0.935 -- 0.272 -- 1.17 -0.104 -- 71 7217 -- --
17.03 0.193 11.4 0.811 0.25 -- -0.0683 -- -0.0714 7.35 -- -- -- --
17.04 0.193 11.4 0.81 0.249 -- -- -- -0.0712 7.43 -- -- -- --
18.23 0.199 11.4 0.879 -- 0.308 -- -- -0.123 -- 70 8594 -- --
30.69 0.258 11.4 -- 0.317 0.383 -- -- -0.196 8.01 72 2408 -- --
20.36 0.211 11.4 0.814 -- -- -- -- -0.0671 -- -- -- -- --
34.34 0.274 11.4 -- 0.257 -- -- -- -0.161 7.22 -- -- -- --
34.22 0.272 11.4 -- -- 0.364 -- -- -0.187 -- 71 2873 -- --
37.84 0.287 11.4 -- -- -- -- -- -0.157 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.66 humidity 80.0 1440 > th dose independent rect. 8 2
2 12.67 humidity 80.0 1440 < th dose independent rect. 8 2
6 12.92 humidity 80.0 1440 > th dose dependent rect. 7 2
7 12.95 humidity 70.0 1440 < th dose independent rect. 10 1
14 13.03 humidity 70.0 1440 > th dose independent rect. 10 1
46 13.18 humidity 70.0 14400 < th dose independent rect. 18 15
67 13.27 precipitation 0.1 4320 > th dose dependent rect. 5 5
70 13.28 humidity 90.0 14400 < th dose independent rect. 7 1
78 13.30 precipitation 0.1 4320 < th dose independent rect. 5 5
82 13.30 precipitation 0.1 4320 < th dose dependent rect. 5 5
87 13.31 precipitation 0.1 4320 > th dose independent rect. 5 5
100 13.35 precipitation 0.1 4320 < th dose independent rect. 5 2
102 13.35 precipitation 0.1 4320 < th dose dependent rect. 5 2
117 13.39 precipitation 0.1 4320 < th dose independent rect. 14 3
119 13.39 precipitation 0.1 4320 < th dose dependent rect. 14 3
122 13.40 humidity 70.0 14400 > th dose independent rect. 18 15
123 13.41 humidity 90.0 14400 > th dose independent rect. 7 1
125 13.41 precipitation 0.1 4320 > th dose independent rect. 14 3
129 13.42 precipitation 0.1 4320 > th dose independent rect. 5 2
131 13.42 humidity 70.0 4320 < th dose independent rect. 18 19
132 13.42 humidity 60.0 14400 > th dose dependent rect. 9 1
134 13.42 precipitation 0.1 4320 > th dose dependent rect. 5 2
156 13.45 precipitation 0.1 4320 > th dose dependent rect. 14 3
160 13.46 humidity 90.0 14400 < th dose dependent rect. 9 1
166 13.47 humidity 80.0 14400 > th dose dependent rect. 8 3
174 13.48 humidity 90.0 14400 > th dose dependent rect. 6 16
178 13.49 humidity 90.0 14400 < th dose independent rect. 7 7
180 13.49 humidity 70.0 4320 > th dose independent rect. 18 19
181 13.49 humidity 70.0 4320 < th dose independent rect. 15 22
186 13.50 humidity 90.0 14400 < th dose independent rect. 7 4
187 13.50 humidity 90.0 14400 > th dose independent rect. 7 15
209 13.51 humidity 70.0 14400 < th dose dependent rect. 17 19
217 13.52 humidity 90.0 14400 > th dose independent rect. 7 13
225 13.53 temperature 25.0 14400 > th dose independent rect. 13 1
229 13.53 humidity 90.0 14400 > th dose independent rect. 7 11
230 13.53 humidity 90.0 14400 < th dose independent rect. 7 11
247 13.54 humidity 70.0 14400 < th dose dependent sin 10 NA
255 13.54 humidity 70.0 14400 < th dose dependent rect. 17 17
259 13.55 humidity 70.0 14400 < th dose independent rect. 17 2
264 13.55 humidity 90.0 14400 < th dose independent rect. 7 16
267 13.55 humidity 70.0 4320 > th dose independent rect. 15 21
277 13.55 humidity 90.0 14400 > th dose dependent rect. 9 13
294 13.56 humidity 90.0 14400 > th dose dependent rect. 15 7
299 13.57 humidity 90.0 14400 > th dose independent rect. 7 4
303 13.57 humidity 70.0 4320 < th dose independent rect. 9 11
322 13.57 humidity 60.0 14400 < th dose independent rect. 11 23
340 13.58 humidity 90.0 14400 > th dose independent rect. 7 7
350 13.58 humidity 90.0 14400 > th dose dependent sin 21 NA
365 13.59 humidity 70.0 14400 < th dose independent sin 10 NA
366 13.59 temperature 25.0 14400 < th dose independent rect. 10 1
367 13.59 temperature 25.0 14400 < th dose independent rect. 15 1
374 13.59 precipitation 0.1 4320 < th dose independent rect. 5 12
403 13.59 humidity 90.0 14400 > th dose dependent rect. 19 3
412 13.59 precipitation 0.1 4320 < th dose dependent rect. 5 12
413 13.60 humidity 90.0 14400 > th dose independent sin 22 NA
416 13.60 humidity 90.0 14400 > th dose independent rect. 19 4
417 13.60 temperature 25.0 14400 > th dose independent rect. 10 5
421 13.60 humidity 90.0 14400 > th dose independent rect. 16 7
455 13.61 humidity 70.0 4320 < th dose independent no NA NA
457 13.61 temperature 25.0 14400 > th dose independent rect. 10 1
459 13.61 humidity 90.0 14400 > th dose independent rect. 19 1
482 13.61 precipitation 0.1 4320 > th dose independent rect. 5 12
669 13.62 humidity 60.0 14400 < th dose independent sin 21 NA
680 13.62 humidity 60.0 14400 < th dose independent rect. 11 9
712 13.62 wind 1.0 14400 > th dose dependent rect. 4 1
803 13.63 humidity 70.0 14400 < th dose dependent no NA NA
821 13.63 humidity 70.0 14400 < th dose dependent rect. 8 12
897 13.63 humidity 70.0 14400 < th dose dependent rect. 13 23
907 13.64 humidity 90.0 14400 < th dose independent rect. 19 4
956 13.64 humidity 70.0 14400 < th dose dependent rect. 9 5
992 13.64 humidity 70.0 14400 < th dose dependent rect. 11 23