Os12g0562100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0562100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.41 | 0.513 | 10 | 0.373 | 1.22 | -1.52 | 0.722 | 3.78 | -0.357 | 18.6 | 25.9 | 7998 | -- | -- |
| 133.23 | 0.538 | 10.1 | 0.209 | 1.23 | -1.63 | 0.405 | -- | -0.466 | 18.6 | 22.2 | 26354 | -- | -- |
| 120.72 | 0.512 | 10 | 0.369 | 1.23 | -1.52 | -- | 3.8 | -0.354 | 18.6 | 25.88 | 7976 | -- | -- |
| 129.09 | 0.529 | 10.1 | 0.352 | 1.13 | -1.88 | -- | -- | -0.504 | 18.4 | 20.32 | 24882 | -- | -- |
| 192.89 | 0.647 | 9.97 | 0.43 | -- | -1.56 | -- | 3.77 | -0.318 | -- | 25.6 | 10036 | -- | -- |
| 195.96 | 0.656 | 10.3 | -1.55 | 1.18 | -- | 0.85 | -- | -1.2 | 18.3 | -- | -- | -- | -- |
| 197.74 | 0.659 | 10.3 | -1.56 | 1.18 | -- | -- | -- | -1.2 | 18.3 | -- | -- | -- | -- |
| 197.79 | 0.655 | 10.1 | 0.727 | -- | -2.26 | -- | -- | -0.333 | -- | 20.31 | 24480 | -- | -- |
| 130.29 | 0.532 | 10.1 | -- | 1.18 | -1.81 | -- | -- | -0.521 | 18.4 | 20.67 | 20581 | -- | -- |
| 270.36 | 0.768 | 10.3 | -1.59 | -- | -- | -- | -- | -1.23 | -- | -- | -- | -- | -- |
| 261.58 | 0.757 | 10.3 | -- | 1.2 | -- | -- | -- | -1.03 | 18.2 | -- | -- | -- | -- |
| 202.23 | 0.662 | 10.1 | -- | -- | -1.78 | -- | -- | -0.531 | -- | 20.5 | 23044 | -- | -- |
| 336.86 | 0.857 | 10.2 | -- | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.97 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 2 | 115.00 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 115.93 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 7 | 117.01 | wind | 3 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 8 | 117.17 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 17 | 118.27 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 20 | 118.42 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 48 | 119.13 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 66 | 119.52 | wind | 7 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 78 | 119.68 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 89 | 119.69 | wind | 7 | 43200 | < th | dose independent | sin | 2 | NA |
| 98 | 119.81 | wind | 7 | 43200 | > th | dose independent | sin | 2 | NA |
| 104 | 119.85 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 123 | 120.08 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 130 | 120.23 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 156 | 120.58 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 195 | 120.89 | humidity | 90 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 204 | 120.96 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 7 |
| 218 | 121.09 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 221 | 121.10 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 223 | 121.11 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 250 | 121.35 | humidity | 90 | 43200 | > th | dose dependent | sin | 17 | NA |
| 252 | 121.35 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 260 | 121.43 | humidity | 80 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 262 | 121.45 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 272 | 121.53 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 15 |
| 276 | 121.56 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 281 | 121.59 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 290 | 121.61 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 7 |
| 315 | 121.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 316 | 121.76 | humidity | 90 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 319 | 121.77 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 22 |
| 327 | 121.81 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 19 |
| 331 | 121.84 | temperature | 25 | 1440 | > th | dose dependent | sin | 15 | NA |
| 332 | 121.85 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 348 | 121.89 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 22 |
| 377 | 122.02 | wind | 5 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 423 | 122.20 | temperature | 25 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 446 | 122.33 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 451 | 122.34 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 457 | 122.35 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 466 | 122.38 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 467 | 122.40 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 484 | 122.44 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 23 |
| 488 | 122.45 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 492 | 122.47 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 17 |
| 553 | 122.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 22 |
| 556 | 122.65 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 20 |
| 573 | 122.69 | humidity | 90 | 43200 | > th | dose independent | sin | 18 | NA |
| 576 | 122.70 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 590 | 122.74 | wind | 5 | 43200 | > th | dose dependent | sin | 0 | NA |
| 615 | 122.80 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 645 | 122.88 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 659 | 122.91 | wind | 7 | 43200 | > th | dose dependent | sin | 21 | NA |
| 686 | 122.96 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 744 | 123.11 | humidity | 70 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 776 | 123.22 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 792 | 123.26 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 796 | 123.27 | humidity | 90 | 43200 | > th | dose independent | rect. | 7 | 20 |
| 854 | 123.42 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 923 | 123.56 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 944 | 123.61 | temperature | 20 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 956 | 123.63 | humidity | 90 | 43200 | > th | dose dependent | sin | 3 | NA |
| 960 | 123.64 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 21 |
| 971 | 123.66 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 5 |
| 987 | 123.69 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 998 | 123.72 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 21 |