Os12g0555200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Probenazole-inducible protein PBZ1.
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Os12g0555200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Probenazole-inducible protein PBZ1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 741.47 | 1.28 | 6.7 | 5.18 | 0.351 | -2.92 | -0.973 | -15.7 | 0.669 | 18.6 | 0.1004 | 4320 | 18 | 11 |
| 1022.89 | 1.5 | 6.55 | 1.67 | 0.806 | -0.558 | -0.528 | -- | 0.521 | 22.6 | 0.1004 | 4320 | 18 | 11 |
| 734.9 | 1.26 | 6.71 | 5.15 | 0.321 | -2.94 | -- | -15.8 | 0.693 | 17.8 | 0.1073 | 4320 | 18.2 | 10.9 |
| 842 | 1.35 | 6.81 | -0.278 | 0.24 | -2.76 | -- | -- | -0.679 | 19.5 | 1.42 | 47520 | 16.2 | 5.42 |
| 741.27 | 1.27 | 6.73 | 5.19 | -- | -2.93 | -- | -15.9 | 0.649 | -- | 0.1012 | 4321 | 18.2 | 10.9 |
| 1029.21 | 1.5 | 6.53 | 1.68 | 0.244 | -- | -1.1 | -- | 0.542 | 19.3 | -- | -- | -- | -- |
| 1032.39 | 1.5 | 6.54 | 1.7 | 0.242 | -- | -- | -- | 0.539 | 19.9 | -- | -- | -- | -- |
| 839.15 | 1.35 | 6.78 | -0.877 | -- | -3.14 | -- | -- | -0.759 | -- | 0.4799 | 47520 | 15.9 | 2.79 |
| 842.25 | 1.35 | 6.8 | -- | 0.252 | -2.65 | -- | -- | -0.654 | 18.6 | 1.698 | 47520 | 16.2 | 5.94 |
| 1035.59 | 1.5 | 6.53 | 1.7 | -- | -- | -- | -- | 0.536 | -- | -- | -- | -- | -- |
| 1108.41 | 1.56 | 6.58 | -- | 0.233 | -- | -- | -- | 0.35 | 20.4 | -- | -- | -- | -- |
| 845.5 | 1.35 | 6.8 | -- | -- | -2.64 | -- | -- | -0.656 | -- | 1.66 | 47520 | 16.3 | 6.97 |
| 1111.43 | 1.56 | 6.57 | -- | -- | -- | -- | -- | 0.348 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 692.40 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 2 | 706.20 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 17 | 727.18 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 19 | 729.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 12 |
| 26 | 731.24 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 51 | 734.27 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 74 | 735.73 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 87 | 736.29 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 107 | 737.34 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 167 | 739.88 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 185 | 740.36 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 279 | 743.18 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 18 |
| 290 | 743.37 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 293 | 743.40 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 337 | 744.22 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 362 | 744.74 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 12 | 14 |
| 454 | 746.05 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 465 | 746.18 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 536 | 747.20 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 582 | 747.98 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 718 | 749.49 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 759 | 749.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 766 | 750.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 767 | 750.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 787 | 750.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 17 |
| 798 | 750.50 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 854 | 751.20 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 873 | 751.55 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 24 | 17 |
| 975 | 752.91 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 977 | 752.93 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 981 | 752.94 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 984 | 752.95 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 12 |