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Os12g0555000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Probenazole-inducible protein PBZ1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0497) R2 : 0.395
β1 : 1.52 (0.185) R2dD : 0.0984 R2D : -0.0138
β2 : 0.973 (0.121) R2dC : 0.0846 R2C : 0.0828
β3 : 2.17 (0.278) R2dE : 0.0997 R2E : -0.0602
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 8.19 (0.942) R2dD*E : 0.122 R2D*E : 0.0161
γ1 : 1.07 (0.106) R2dN8 : 0.182 R2N8 : 0.1
σ : 0.921
deviance : 390.62
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C
peak time of C : 2.34
E
wheather : radiation
threshold : 50.17
memory length : 4374
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
390.51 0.928 11.1 1.54 0.96 2.11 0.283 8 1.05 2.31 49.8 4373 -- --
424.3 0.959 11.2 1.75 1.14 1.88 0.545 -- 0.625 2.65 42.18 8010 -- --
390.62 0.921 11.1 1.52 0.973 2.17 -- 8.19 1.07 2.34 50.17 4374 -- --
419.68 0.954 11.2 1.54 1.05 1.63 -- -- 0.627 2.5 40.03 9304 -- --
444.23 0.982 11.1 1.55 -- 2.37 -- 9.01 1.07 -- 50.63 4351 -- --
473.93 1.02 11.1 1.17 1.05 -- 0.404 -- 1.03 2.25 -- -- -- --
474.54 1.02 11.1 1.16 1.05 -- -- -- 1.02 2.25 -- -- -- --
473.34 1.01 11.2 1.55 -- 1.68 -- -- 0.628 -- 30 9884 -- --
469.08 1.01 11.2 -- 0.949 1.11 -- -- 0.582 2.33 30 11500 -- --
540.58 1.09 11.1 1.2 -- -- -- -- 1.05 -- -- -- -- --
509.84 1.06 11.1 -- 1.08 -- -- -- 0.894 2.28 -- -- -- --
511.52 1.05 11.2 -- -- 1.17 -- -- 0.621 -- 9.93 12726 -- --
578.68 1.12 11.1 -- -- -- -- -- 0.915 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 370.60 precipitation 0.1 43200 > th dose dependent rect. 24 5
2 370.98 radiation 10.0 14400 > th dose independent rect. 11 2
3 371.87 precipitation 0.1 43200 > th dose dependent rect. 1 16
11 372.91 precipitation 0.1 43200 > th dose independent rect. 24 5
14 373.24 precipitation 0.1 43200 < th dose independent rect. 24 5
15 373.24 precipitation 0.1 43200 < th dose dependent rect. 24 5
21 373.76 precipitation 0.1 43200 < th dose independent rect. 1 16
22 373.76 precipitation 0.1 43200 < th dose dependent rect. 1 16
23 373.77 precipitation 0.1 43200 > th dose independent rect. 1 16
41 374.77 precipitation 0.1 43200 > th dose independent rect. 1 19
43 374.81 precipitation 0.1 43200 < th dose independent rect. 1 19
45 374.81 precipitation 0.1 43200 < th dose dependent rect. 1 19
85 375.84 humidity 70.0 43200 > th dose independent rect. 13 3
116 376.74 wind 3.0 14400 > th dose dependent rect. 18 1
122 376.82 precipitation 0.1 43200 > th dose dependent rect. 22 8
123 376.86 precipitation 0.1 43200 > th dose independent sin 3 NA
124 376.86 precipitation 0.1 43200 < th dose independent sin 3 NA
125 376.86 precipitation 0.1 43200 > th dose dependent sin 4 NA
126 376.86 precipitation 0.1 43200 < th dose dependent sin 3 NA
133 377.24 wind 5.0 14400 < th dose independent rect. 18 1
206 378.42 precipitation 0.1 43200 > th dose independent rect. 22 8
224 378.68 precipitation 0.1 43200 < th dose independent rect. 22 8
226 378.68 precipitation 0.1 43200 < th dose dependent rect. 22 8
259 379.44 wind 7.0 43200 > th dose dependent rect. 18 1
277 379.70 precipitation 0.1 43200 > th dose dependent rect. 18 14
279 379.71 precipitation 0.1 43200 > th dose dependent rect. 24 20
295 379.99 precipitation 0.1 43200 > th dose independent sin 9 NA
296 379.99 precipitation 0.1 43200 < th dose independent sin 9 NA
297 379.99 precipitation 0.1 43200 < th dose dependent sin 9 NA
304 380.06 precipitation 0.1 43200 > th dose independent rect. 18 14
306 380.11 precipitation 0.1 43200 < th dose independent rect. 18 14
307 380.11 precipitation 0.1 43200 < th dose dependent rect. 18 14
318 380.31 precipitation 0.1 43200 > th dose dependent rect. 21 11
343 380.53 precipitation 0.1 43200 > th dose dependent rect. 18 20
347 380.68 wind 1.0 43200 > th dose independent rect. 20 14
360 380.89 wind 1.0 43200 > th dose independent sin 9 NA
389 381.32 precipitation 0.1 43200 < th dose independent rect. 21 10
390 381.32 precipitation 0.1 43200 < th dose dependent rect. 21 10
394 381.36 precipitation 0.1 43200 > th dose independent rect. 21 10
400 381.52 wind 5.0 14400 > th dose independent rect. 18 1
423 381.64 precipitation 0.1 43200 < th dose independent rect. 21 12
424 381.64 precipitation 0.1 43200 < th dose dependent rect. 21 12
428 381.76 precipitation 0.1 43200 > th dose independent rect. 21 12
441 381.85 wind 1.0 43200 < th dose dependent rect. 3 9
443 381.87 precipitation 0.1 43200 < th dose independent rect. 13 19
444 381.87 precipitation 0.1 43200 < th dose dependent rect. 13 19
447 381.90 precipitation 0.1 43200 > th dose independent rect. 13 19
463 382.02 precipitation 0.1 43200 > th dose independent rect. 19 19
481 382.06 humidity 90.0 14400 < th dose independent rect. 6 1
506 382.16 radiation 20.0 14400 < th dose independent rect. 12 1
532 382.39 precipitation 0.1 43200 > th dose independent rect. 15 17
533 382.39 precipitation 0.1 43200 < th dose independent rect. 15 17
534 382.39 precipitation 0.1 43200 < th dose dependent rect. 15 17
556 382.62 wind 1.0 43200 < th dose dependent sin 6 NA
581 382.80 precipitation 0.1 43200 > th dose independent rect. 19 22
582 382.80 precipitation 0.1 43200 < th dose independent rect. 19 22
584 382.80 precipitation 0.1 43200 < th dose dependent rect. 19 22
622 383.04 wind 1.0 43200 < th dose dependent rect. 1 11
633 383.24 wind 1.0 43200 < th dose dependent rect. 1 4
636 383.26 radiation 10.0 14400 > th dose independent sin 2 NA
657 383.41 atmosphere 995.0 43200 > th dose independent rect. 21 15
662 383.43 radiation 10.0 14400 < th dose dependent rect. 10 6
714 383.75 radiation 20.0 14400 < th dose dependent rect. 12 1
735 383.93 atmosphere 995.0 43200 < th dose independent rect. 21 15
745 383.99 atmosphere 995.0 43200 < th dose independent rect. 22 13
751 384.02 atmosphere 995.0 43200 > th dose independent rect. 23 12
760 384.09 wind 9.0 43200 < th dose independent rect. 18 1
783 384.23 radiation 20.0 4320 > th dose independent rect. 16 16
855 384.55 wind 1.0 43200 > th dose independent rect. 24 5
874 384.65 radiation 40.0 4320 > th dose dependent rect. 14 19
875 384.67 radiation 10.0 14400 > th dose independent rect. 10 23
901 384.73 wind 1.0 43200 > th dose independent rect. 21 10
903 384.73 atmosphere 995.0 43200 < th dose dependent sin 10 NA
953 384.90 wind 1.0 43200 < th dose dependent rect. 3 2
975 385.05 precipitation 0.1 43200 > th dose independent no NA NA
976 385.05 precipitation 0.1 43200 < th dose independent no NA NA
977 385.05 precipitation 0.1 43200 < th dose dependent no NA NA