Os12g0533500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0533500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.28 | 0.236 | 11.3 | 1.17 | 0.712 | -0.595 | 0.403 | 2.09 | 0.374 | 1.47 | 21.42 | 19 | -- | -- |
| 27.69 | 0.247 | 11.3 | 0.799 | 0.722 | -0.473 | -0.145 | -- | 0.258 | 1.44 | 23 | 78 | -- | -- |
| 25.58 | 0.236 | 11.3 | 1.1 | 0.712 | -0.601 | -- | 1.75 | 0.351 | 1.32 | 22.23 | 56 | -- | -- |
| 27.72 | 0.245 | 11.3 | 0.807 | 0.762 | -0.451 | -- | -- | 0.252 | 1.09 | 23 | 188 | -- | -- |
| 45.93 | 0.317 | 11.2 | 1.3 | -- | -1.25 | -- | 2.11 | 0.481 | -- | 22 | 70 | -- | -- |
| 31.21 | 0.262 | 11.3 | 0.714 | 0.9 | -- | -0.0398 | -- | 0.188 | 1.69 | -- | -- | -- | -- |
| 31.21 | 0.262 | 11.3 | 0.716 | 0.9 | -- | -- | -- | 0.189 | 1.69 | -- | -- | -- | -- |
| 49.44 | 0.329 | 11.3 | 0.942 | -- | -1.11 | -- | -- | 0.363 | -- | 23 | 188 | -- | -- |
| 43.32 | 0.307 | 11.3 | -- | 0.882 | -0.275 | -- | -- | 0.0976 | 1.33 | 28.3 | 523 | -- | -- |
| 80.59 | 0.419 | 11.3 | 0.752 | -- | -- | -- | -- | 0.209 | -- | -- | -- | -- | -- |
| 44.72 | 0.313 | 11.3 | -- | 0.913 | -- | -- | -- | 0.109 | 1.71 | -- | -- | -- | -- |
| 71.48 | 0.395 | 11.3 | -- | -- | -0.987 | -- | -- | 0.215 | -- | 24.1 | 8 | -- | -- |
| 95.51 | 0.456 | 11.3 | -- | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.04 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 17 |
| 8 | 24.31 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 5 | 21 |
| 17 | 24.48 | wind | 3.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 24 | 24.60 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 13 |
| 25 | 24.61 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 28 | 24.70 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 42 | 24.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 43 | 24.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 44 | 24.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 48 | 24.86 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 54 | 24.89 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 66 | 24.92 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 67 | 24.92 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 13 |
| 92 | 24.96 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 12 |
| 104 | 24.99 | wind | 3.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 128 | 25.01 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 15 |
| 135 | 25.02 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 147 | 25.03 | wind | 3.0 | 43200 | < th | dose independent | sin | 3 | NA |
| 151 | 25.03 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 160 | 25.04 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 16 |
| 175 | 25.06 | wind | 3.0 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 177 | 25.06 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 204 | 25.08 | wind | 1.0 | 43200 | > th | dose dependent | sin | 2 | NA |
| 206 | 25.08 | wind | 5.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 242 | 25.11 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 245 | 25.11 | wind | 9.0 | 43200 | < th | dose dependent | sin | 2 | NA |
| 314 | 25.17 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 320 | 25.18 | radiation | 10.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 322 | 25.18 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 324 | 25.18 | wind | 3.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 328 | 25.18 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 18 | 13 |
| 332 | 25.18 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 17 | 15 |
| 345 | 25.19 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 363 | 25.20 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 17 | 17 |
| 377 | 25.21 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 380 | 25.21 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 16 | 17 |
| 382 | 25.21 | wind | 3.0 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 406 | 25.23 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 408 | 25.23 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 459 | 25.25 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 495 | 25.26 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 545 | 25.29 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 546 | 25.29 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 561 | 25.29 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 562 | 25.29 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 566 | 25.30 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 579 | 25.31 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 615 | 25.32 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 665 | 25.33 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 16 | 17 |
| 675 | 25.34 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 698 | 25.35 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 701 | 25.35 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 759 | 25.37 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 768 | 25.37 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 15 |
| 790 | 25.38 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 808 | 25.38 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 842 | 25.39 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 866 | 25.41 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 869 | 25.41 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 879 | 25.41 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 891 | 25.42 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 897 | 25.42 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 13 |
| 930 | 25.42 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 952 | 25.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 962 | 25.43 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 975 | 25.43 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 980 | 25.44 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 981 | 25.44 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 998 | 25.44 | wind | 1.0 | 43200 | > th | dose dependent | no | NA | NA |