Os12g0514900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial import inner membrane translocase, subunit Tim17/22 family protein.
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Os12g0514900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial import inner membrane translocase, subunit Tim17/22 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14 | 0.176 | 12.4 | -0.774 | 0.28 | 0.901 | -0.137 | 0.189 | -0.214 | 3.49 | 18.06 | 10 | -- | -- |
| 14.03 | 0.174 | 12.4 | -0.802 | 0.281 | 0.907 | -0.196 | -- | -0.222 | 3.47 | 18.1 | 10 | -- | -- |
| 14.04 | 0.175 | 12.4 | -0.756 | 0.281 | 0.907 | -- | 0.3 | -0.209 | 3.44 | 18 | 10 | -- | -- |
| 14.14 | 0.175 | 12.4 | -0.802 | 0.283 | 0.908 | -- | -- | -0.223 | 3.42 | 18.32 | 10 | -- | -- |
| 17.02 | 0.192 | 12.4 | -0.688 | -- | 0.658 | -- | 0.331 | -0.159 | -- | 17.32 | 4 | -- | -- |
| 25.2 | 0.235 | 12.4 | -0.609 | 0.00907 | -- | -0.453 | -- | -0.0734 | 4.84 | -- | -- | -- | -- |
| 25.25 | 0.235 | 12.4 | -0.605 | 0.0888 | -- | -- | -- | -0.0707 | 10.4 | -- | -- | -- | -- |
| 17.14 | 0.193 | 12.4 | -0.738 | -- | 0.65 | -- | -- | -0.173 | -- | 18 | 4 | -- | -- |
| 29.36 | 0.252 | 12.4 | -- | 0.174 | 0.587 | -- | -- | -0.0887 | 3.94 | 19.75 | 4 | -- | -- |
| 25.73 | 0.237 | 12.4 | -0.607 | -- | -- | -- | -- | -0.071 | -- | -- | -- | -- | -- |
| 34.91 | 0.276 | 12.3 | -- | 0.0929 | -- | -- | -- | -0.00331 | 10.8 | -- | -- | -- | -- |
| 30.57 | 0.258 | 12.4 | -- | -- | 0.452 | -- | -- | -0.0672 | -- | 19.7 | 4 | -- | -- |
| 35.44 | 0.278 | 12.3 | -- | -- | -- | -- | -- | -0.00369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.16 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 2 | 14.20 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 5 | 14.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 7 | 14.27 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 13 | 14.42 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 18 | 14.47 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 19 | 14.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 22 | 14.53 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 23 | 14.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 30 | 14.64 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 33 | 14.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 41 | 14.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 44 | 14.77 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 45 | 14.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 46 | 14.79 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 52 | 14.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 59 | 14.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 72 | 14.95 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 81 | 15.00 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 17 |
| 99 | 15.12 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 102 | 15.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 106 | 15.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 18 |
| 109 | 15.18 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 113 | 15.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 173 | 15.45 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 190 | 15.50 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 17 |
| 234 | 15.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 249 | 15.63 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 282 | 15.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 285 | 15.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 13 |
| 326 | 15.81 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 349 | 15.86 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 387 | 15.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 436 | 16.00 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 18 |
| 499 | 16.09 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 521 | 16.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 4 |
| 627 | 16.22 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 22 |
| 959 | 16.46 | temperature | 20 | 90 | > th | dose dependent | sin | 9 | NA |
| 973 | 16.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |