Os12g0509600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0509600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.48 | 0.306 | 3.07 | 0.35 | 0.173 | 2.71 | 0.32 | 12.1 | 0.356 | 13.1 | 10.3 | 427 | -- | -- |
| 53.23 | 0.34 | 3.03 | 0.257 | 0.235 | 1.79 | 0.352 | -- | 0.389 | 9.53 | 10.26 | 391 | -- | -- |
| 42.81 | 0.305 | 3.07 | 0.373 | 0.163 | 3 | -- | 13.5 | 0.356 | 13 | 10.38 | 427 | -- | -- |
| 47.37 | 0.321 | 3.04 | 0.276 | 0.139 | 0.448 | -- | -- | 0.359 | 11.7 | 9.999 | 405 | -- | -- |
| 44.54 | 0.311 | 3.07 | 0.371 | -- | 3.04 | -- | 13.7 | 0.356 | -- | 10.4 | 425 | -- | -- |
| 47.45 | 0.323 | 3.04 | 0.245 | 0.144 | -- | 0.281 | -- | 0.354 | 13.4 | -- | -- | -- | -- |
| 47.76 | 0.324 | 3.04 | 0.254 | 0.144 | -- | -- | -- | 0.356 | 13 | -- | -- | -- | -- |
| 48.56 | 0.325 | 3.04 | 0.269 | -- | 0.406 | -- | -- | 0.362 | -- | 10 | 377 | -- | -- |
| 49.23 | 0.327 | 3.05 | -- | 0.138 | 0.295 | -- | -- | 0.33 | 12.6 | 10.11 | 377 | -- | -- |
| 49.05 | 0.327 | 3.04 | 0.249 | -- | -- | -- | -- | 0.353 | -- | -- | -- | -- | -- |
| 49.46 | 0.329 | 3.05 | -- | 0.14 | -- | -- | -- | 0.327 | 12.9 | -- | -- | -- | -- |
| 50.44 | 0.331 | 3.05 | -- | -- | 0.29 | -- | -- | 0.331 | -- | 10.1 | 373 | -- | -- |
| 50.68 | 0.332 | 3.05 | -- | -- | -- | -- | -- | 0.325 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.83 | wind | 1e+00 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 2 | 42.09 | wind | 1e+00 | 270 | < th | dose independent | rect. | 19 | 1 |
| 6 | 42.12 | atmosphere | 1e+03 | 270 | < th | dose independent | rect. | 19 | 1 |
| 7 | 42.12 | atmosphere | 1e+03 | 270 | < th | dose dependent | rect. | 19 | 1 |
| 8 | 42.12 | atmosphere | 1e+03 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 20 | 42.15 | atmosphere | 1e+03 | 90 | < th | dose independent | rect. | 23 | 2 |
| 31 | 42.16 | wind | 9e+00 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 37 | 42.16 | atmosphere | 1e+03 | 10 | < th | dose dependent | rect. | 16 | 9 |
| 50 | 42.18 | atmosphere | 1e+03 | 10 | < th | dose independent | rect. | 23 | 1 |
| 157 | 42.30 | wind | 7e+00 | 720 | > th | dose dependent | rect. | 14 | 1 |
| 176 | 42.34 | atmosphere | 1e+03 | 270 | > th | dose independent | sin | 13 | NA |
| 191 | 42.37 | atmosphere | 1e+03 | 270 | < th | dose independent | sin | 13 | NA |
| 220 | 42.43 | atmosphere | 1e+03 | 10 | < th | dose independent | rect. | 16 | 9 |
| 224 | 42.44 | atmosphere | 1e+03 | 90 | > th | dose independent | sin | 11 | NA |
| 247 | 42.48 | wind | 9e+00 | 720 | > th | dose independent | rect. | 17 | 1 |
| 275 | 42.52 | atmosphere | 1e+03 | 270 | < th | dose independent | rect. | 19 | 11 |
| 279 | 42.53 | atmosphere | 1e+03 | 10 | < th | dose independent | sin | 11 | NA |
| 290 | 42.54 | atmosphere | 1e+03 | 90 | < th | dose independent | rect. | 22 | 11 |
| 409 | 42.70 | wind | 9e+00 | 720 | > th | dose dependent | rect. | 14 | 4 |
| 428 | 42.72 | wind | 9e+00 | 720 | > th | dose dependent | sin | 12 | NA |
| 558 | 42.93 | wind | 7e+00 | 720 | > th | dose independent | rect. | 14 | 1 |
| 591 | 42.97 | atmosphere | 1e+03 | 10 | < th | dose dependent | sin | 11 | NA |
| 715 | 43.19 | atmosphere | 1e+03 | 90 | < th | dose dependent | rect. | 22 | 11 |
| 799 | 43.40 | precipitation | 1e-01 | 720 | > th | dose independent | rect. | 18 | 1 |
| 969 | 43.69 | wind | 1e+00 | 90 | < th | dose independent | rect. | 21 | 3 |