Os12g0507400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0507400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 321.96 | 0.843 | 3.84 | -0.662 | 1.11 | 1.4 | 0.824 | -0.916 | 0.223 | 19.6 | 92.87 | 166 | -- | -- |
| 322.11 | 0.836 | 3.84 | -0.641 | 1.14 | 1.67 | 0.839 | -- | 0.214 | 19.6 | 93.62 | 173 | -- | -- |
| 323.59 | 0.838 | 3.85 | -0.681 | 1.1 | 1.55 | -- | -0.886 | 0.219 | 19.7 | 93.46 | 172 | -- | -- |
| 324.47 | 0.839 | 3.84 | -0.665 | 1.09 | 1.6 | -- | -- | 0.186 | 19.8 | 93.71 | 177 | -- | -- |
| 375.35 | 0.907 | 3.85 | -0.618 | -- | 0.813 | -- | -2.85 | 0.125 | -- | 93.65 | 67 | -- | -- |
| 348.38 | 0.875 | 3.87 | -0.565 | 0.847 | -- | 0.275 | -- | 0.0543 | 21 | -- | -- | -- | -- |
| 348.63 | 0.874 | 3.87 | -0.575 | 0.845 | -- | -- | -- | 0.0538 | 21.1 | -- | -- | -- | -- |
| 379.71 | 0.908 | 3.83 | -0.609 | -- | 1.33 | -- | -- | 0.104 | -- | 94.7 | 133 | -- | -- |
| 335.73 | 0.853 | 3.83 | -- | 1.08 | 1.64 | -- | -- | 0.251 | 20 | 93.92 | 183 | -- | -- |
| 389.74 | 0.922 | 3.85 | -0.574 | -- | -- | -- | -- | 0.0489 | -- | -- | -- | -- | -- |
| 357.36 | 0.884 | 3.85 | -- | 0.845 | -- | -- | -- | 0.118 | 21 | -- | -- | -- | -- |
| 389.14 | 0.919 | 3.82 | -- | -- | 1.35 | -- | -- | 0.163 | -- | 94.79 | 133 | -- | -- |
| 398.42 | 0.932 | 3.83 | -- | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 320.11 | humidity | 90 | 270 | > th | dose dependent | rect. | 18 | 11 |
| 4 | 320.67 | humidity | 90 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 5 | 320.71 | humidity | 90 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 10 | 320.98 | humidity | 90 | 90 | > th | dose dependent | rect. | 1 | 4 |
| 11 | 321.05 | humidity | 90 | 90 | > th | dose independent | rect. | 3 | 2 |
| 30 | 322.69 | humidity | 90 | 270 | > th | dose dependent | sin | 12 | NA |
| 38 | 322.85 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 1 | 21 |
| 39 | 322.86 | humidity | 90 | 270 | > th | dose independent | rect. | 18 | 11 |
| 73 | 323.58 | humidity | 80 | 90 | > th | dose dependent | rect. | 3 | 7 |
| 75 | 323.60 | humidity | 90 | 90 | > th | dose dependent | sin | 8 | NA |
| 80 | 323.64 | humidity | 90 | 270 | > th | dose independent | rect. | 23 | 6 |
| 121 | 324.16 | humidity | 90 | 90 | > th | dose dependent | rect. | 1 | 9 |
| 137 | 324.32 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 1 | 17 |
| 168 | 324.62 | humidity | 90 | 270 | > th | dose independent | rect. | 15 | 14 |
| 203 | 324.85 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 1 | 11 |
| 259 | 325.37 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 1 | 15 |
| 285 | 325.55 | wind | 1 | 14400 | > th | dose independent | rect. | 15 | 12 |
| 295 | 325.63 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 313 | 325.84 | humidity | 90 | 90 | > th | dose independent | rect. | 3 | 4 |
| 341 | 326.02 | humidity | 90 | 270 | > th | dose independent | sin | 11 | NA |
| 353 | 326.08 | humidity | 90 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 370 | 326.21 | humidity | 90 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 392 | 326.36 | atmosphere | 1000 | 90 | > th | dose independent | rect. | 3 | 16 |
| 403 | 326.47 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 24 | 13 |
| 436 | 326.70 | humidity | 90 | 270 | > th | dose dependent | no | NA | NA |
| 437 | 326.70 | wind | 1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 441 | 326.72 | humidity | 90 | 270 | > th | dose independent | rect. | 1 | 1 |
| 507 | 327.09 | wind | 1 | 14400 | > th | dose independent | sin | 14 | NA |
| 551 | 327.26 | humidity | 90 | 90 | > th | dose independent | rect. | 3 | 7 |
| 563 | 327.35 | wind | 1 | 14400 | < th | dose independent | rect. | 15 | 12 |
| 574 | 327.43 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 614 | 327.64 | wind | 1 | 14400 | < th | dose independent | rect. | 13 | 16 |
| 616 | 327.64 | atmosphere | 1015 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 674 | 327.95 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 24 | 17 |
| 691 | 328.02 | wind | 3 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 713 | 328.09 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 738 | 328.16 | wind | 1 | 14400 | < th | dose independent | sin | 15 | NA |
| 740 | 328.16 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 4 | 16 |
| 756 | 328.22 | wind | 3 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 767 | 328.28 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 796 | 328.41 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 879 | 328.64 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 2 | 22 |
| 888 | 328.68 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 4 |
| 898 | 328.72 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 4 | 20 |
| 922 | 328.80 | humidity | 90 | 90 | < th | dose independent | rect. | 1 | 14 |
| 943 | 328.87 | temperature | 15 | 90 | > th | dose independent | rect. | 3 | 16 |
| 962 | 328.93 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 14 | 23 |
| 968 | 328.95 | humidity | 90 | 90 | > th | dose independent | rect. | 1 | 9 |
| 971 | 328.96 | radiation | 1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 972 | 328.97 | humidity | 70 | 90 | > th | dose independent | rect. | 19 | 8 |
| 982 | 328.98 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 992 | 329.03 | atmosphere | 1005 | 10 | < th | dose dependent | sin | 4 | NA |