Os12g0483500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0483500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.09 | 0.606 | 6.42 | -0.858 | 1.17 | 1.55 | -1.82 | 0.779 | -0.859 | 21.7 | 24.91 | 2110 | -- | -- |
| 166.8 | 0.602 | 6.4 | -0.692 | 1.18 | 1.46 | -1.9 | -- | -0.818 | 21.7 | 25 | 2176 | -- | -- |
| 178.2 | 0.622 | 6.43 | -0.888 | 1.18 | 1.6 | -- | 1.33 | -0.88 | 21.7 | 24.4 | 2166 | -- | -- |
| 180.11 | 0.625 | 6.4 | -0.664 | 1.13 | 1.57 | -- | -- | -0.838 | 21.5 | 24.9 | 1887 | -- | -- |
| 229.14 | 0.709 | 6.36 | -0.675 | -- | 1.79 | -- | -0.612 | -0.847 | -- | 24.4 | 2166 | -- | -- |
| 202.78 | 0.668 | 6.48 | -1.25 | 1.08 | -- | -1.9 | -- | -1.18 | 21.6 | -- | -- | -- | -- |
| 216.18 | 0.689 | 6.47 | -1.18 | 1.09 | -- | -- | -- | -1.18 | 21.5 | -- | -- | -- | -- |
| 229.65 | 0.709 | 6.38 | -0.759 | -- | 1.87 | -- | -- | -0.879 | -- | 24.11 | 3019 | -- | -- |
| 186.65 | 0.636 | 6.37 | -- | 1.13 | 1.8 | -- | -- | -0.713 | 21.6 | 23.39 | 3313 | -- | -- |
| 285.9 | 0.79 | 6.45 | -1.17 | -- | -- | -- | -- | -1.18 | -- | -- | -- | -- | -- |
| 252.91 | 0.744 | 6.45 | -- | 1.09 | -- | -- | -- | -1.05 | 21.4 | -- | -- | -- | -- |
| 243.7 | 0.729 | 6.35 | -- | -- | 2.13 | -- | -- | -0.761 | -- | 24.11 | 3019 | -- | -- |
| 322.19 | 0.838 | 6.42 | -- | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 2 | 164.29 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 3 | 164.59 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 5 | 164.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 6 | 164.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 7 | 164.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 8 | 164.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 9 | 164.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 12 | 165.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 13 | 165.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 15 | 165.50 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 14 |
| 16 | 165.53 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 17 | 165.53 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 20 | 165.60 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 33 | 165.80 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 111 | 166.90 | wind | 5.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 131 | 167.19 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 173 | 167.57 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 5 | NA |
| 182 | 167.63 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 20 | 20 |
| 189 | 167.71 | wind | 5.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 190 | 167.71 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 2 | 14 |
| 221 | 167.86 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 222 | 167.87 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 223 | 167.87 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 294 | 168.18 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 295 | 168.19 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 301 | 168.23 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 302 | 168.24 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 313 | 168.29 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 319 | 168.32 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 323 | 168.33 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 339 | 168.39 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 349 | 168.44 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 4 | 6 |
| 389 | 168.60 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 390 | 168.62 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 22 | 12 |
| 449 | 168.80 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 11 | 4 |
| 462 | 168.82 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 14 | 23 |
| 495 | 168.89 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 505 | 168.93 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 507 | 168.94 | humidity | 60.0 | 43200 | < th | dose dependent | no | NA | NA |
| 512 | 168.94 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 2 | 23 |
| 514 | 168.94 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 24 | 23 |
| 515 | 168.95 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 2 | 20 |
| 529 | 168.97 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 549 | 168.99 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 557 | 169.01 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 569 | 169.02 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 590 | 169.05 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 591 | 169.05 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 592 | 169.05 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 606 | 169.08 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 626 | 169.14 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 6 |
| 629 | 169.15 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 641 | 169.18 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 648 | 169.18 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 657 | 169.20 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 666 | 169.21 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 708 | 169.27 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 757 | 169.35 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 764 | 169.35 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 772 | 169.38 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 789 | 169.41 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 803 | 169.45 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 804 | 169.45 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 868 | 169.58 | wind | 5.0 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 876 | 169.60 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 896 | 169.63 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 905 | 169.63 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 916 | 169.67 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 926 | 169.69 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |