Os12g0479100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0479100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 293.09 | 0.804 | 3.18 | 0.0145 | 0.0428 | -0.885 | 0.987 | 1.68 | 0.247 | 19.1 | 88 | 4141 | -- | -- |
| 296.54 | 0.802 | 3.14 | -0.128 | 0.0161 | -0.868 | 0.936 | -- | 0.253 | 19.3 | 88.05 | 4264 | -- | -- |
| 295.59 | 0.801 | 3.18 | -0.00145 | 0.056 | -0.908 | -- | 1.81 | 0.255 | 18.3 | 88.95 | 4102 | -- | -- |
| 298.89 | 0.805 | 3.15 | -0.222 | 0.053 | -0.86 | -- | -- | 0.21 | 15.9 | 88.79 | 4274 | -- | -- |
| 295.72 | 0.801 | 3.18 | 0.00135 | -- | -0.905 | -- | 1.79 | 0.25 | -- | 88.88 | 4102 | -- | -- |
| 306.84 | 0.821 | 3.24 | -0.065 | 0.0275 | -- | 1.07 | -- | -0.129 | 19.2 | -- | -- | -- | -- |
| 309.82 | 0.824 | 3.23 | -0.086 | 0.0479 | -- | -- | -- | -0.126 | 16 | -- | -- | -- | -- |
| 299.07 | 0.805 | 3.15 | -0.237 | -- | -0.893 | -- | -- | 0.22 | -- | 88.86 | 4265 | -- | -- |
| 300.24 | 0.807 | 3.16 | -- | 0.0727 | -0.818 | -- | -- | 0.223 | 15.8 | 88.64 | 4311 | -- | -- |
| 309.94 | 0.823 | 3.23 | -0.088 | -- | -- | -- | -- | -0.127 | -- | -- | -- | -- | -- |
| 310.01 | 0.824 | 3.23 | -- | 0.0496 | -- | -- | -- | -0.117 | 16 | -- | -- | -- | -- |
| 300.47 | 0.807 | 3.16 | -- | -- | -0.82 | -- | -- | 0.217 | -- | 88.59 | 4265 | -- | -- |
| 310.15 | 0.822 | 3.23 | -- | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 282.39 | wind | 5 | 10 | > th | dose independent | rect. | 19 | 14 |
| 2 | 282.72 | wind | 5 | 10 | > th | dose dependent | rect. | 19 | 14 |
| 7 | 283.22 | temperature | 20 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 11 | 284.10 | wind | 5 | 10 | > th | dose dependent | rect. | 19 | 11 |
| 26 | 285.49 | wind | 5 | 10 | > th | dose independent | rect. | 19 | 11 |
| 30 | 285.69 | wind | 5 | 90 | > th | dose independent | rect. | 18 | 2 |
| 88 | 288.03 | wind | 5 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 104 | 288.55 | wind | 5 | 10 | > th | dose independent | sin | 10 | NA |
| 121 | 289.13 | temperature | 20 | 720 | < th | dose independent | rect. | 16 | 1 |
| 124 | 289.20 | temperature | 20 | 720 | < th | dose dependent | rect. | 16 | 1 |
| 131 | 289.48 | wind | 5 | 10 | < th | dose independent | sin | 10 | NA |
| 156 | 290.22 | wind | 3 | 10 | > th | dose dependent | sin | 11 | NA |
| 176 | 290.57 | wind | 5 | 10 | > th | dose dependent | rect. | 24 | 8 |
| 193 | 290.93 | wind | 3 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 201 | 291.17 | wind | 5 | 10 | > th | dose independent | rect. | 24 | 8 |
| 205 | 291.24 | temperature | 15 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 210 | 291.38 | wind | 3 | 1440 | < th | dose independent | rect. | 19 | 2 |
| 215 | 291.48 | humidity | 90 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 216 | 291.49 | wind | 3 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 226 | 291.77 | humidity | 90 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 241 | 292.09 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 1 |
| 250 | 292.23 | humidity | 90 | 4320 | < th | dose independent | rect. | 13 | 14 |
| 261 | 292.31 | temperature | 15 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 271 | 292.42 | temperature | 20 | 90 | < th | dose independent | rect. | 6 | 15 |
| 278 | 292.51 | temperature | 20 | 90 | < th | dose independent | rect. | 2 | 1 |
| 286 | 292.61 | humidity | 90 | 4320 | < th | dose independent | sin | 16 | NA |
| 297 | 292.67 | humidity | 90 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 298 | 292.67 | wind | 5 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 302 | 292.70 | wind | 3 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 304 | 292.71 | humidity | 90 | 1440 | > th | dose independent | rect. | 18 | 3 |
| 305 | 292.72 | humidity | 90 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 307 | 292.73 | wind | 3 | 1440 | > th | dose independent | rect. | 17 | 4 |
| 319 | 292.84 | humidity | 90 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 323 | 292.85 | wind | 1 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 330 | 292.93 | temperature | 15 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 337 | 292.97 | humidity | 80 | 4320 | > th | dose independent | rect. | 10 | 13 |
| 354 | 293.03 | temperature | 20 | 90 | < th | dose independent | rect. | 10 | 11 |
| 357 | 293.04 | humidity | 80 | 4320 | > th | dose dependent | rect. | 11 | 15 |
| 358 | 293.05 | humidity | 80 | 4320 | > th | dose independent | rect. | 12 | 10 |
| 363 | 293.05 | humidity | 80 | 4320 | > th | dose dependent | rect. | 13 | 12 |
| 367 | 293.06 | temperature | 20 | 90 | < th | dose independent | rect. | 14 | 7 |
| 388 | 293.15 | temperature | 20 | 90 | < th | dose independent | rect. | 18 | 3 |
| 423 | 293.25 | humidity | 80 | 4320 | < th | dose independent | rect. | 10 | 12 |
| 434 | 293.28 | wind | 5 | 10 | > th | dose independent | rect. | 22 | 11 |
| 436 | 293.28 | humidity | 80 | 4320 | > th | dose dependent | sin | 17 | NA |
| 439 | 293.29 | temperature | 15 | 4320 | < th | dose independent | rect. | 4 | 16 |
| 463 | 293.35 | radiation | 1 | 4320 | < th | dose dependent | rect. | 6 | 8 |
| 470 | 293.36 | temperature | 20 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 472 | 293.37 | temperature | 15 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 493 | 293.42 | temperature | 15 | 4320 | < th | dose independent | rect. | 4 | 11 |
| 507 | 293.46 | humidity | 80 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 511 | 293.48 | temperature | 15 | 4320 | > th | dose independent | rect. | 13 | 7 |
| 524 | 293.50 | wind | 1 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 550 | 293.56 | humidity | 90 | 1440 | > th | dose independent | rect. | 16 | 10 |
| 563 | 293.58 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 3 | 1 |
| 605 | 293.64 | temperature | 15 | 4320 | > th | dose independent | rect. | 4 | 16 |
| 610 | 293.66 | radiation | 1 | 4320 | > th | dose independent | rect. | 10 | 3 |
| 678 | 293.78 | humidity | 80 | 4320 | > th | dose independent | sin | 19 | NA |
| 685 | 293.79 | temperature | 15 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 710 | 293.84 | wind | 3 | 1440 | > th | dose independent | rect. | 17 | 7 |
| 730 | 293.88 | temperature | 15 | 4320 | > th | dose independent | rect. | 4 | 13 |
| 742 | 293.89 | temperature | 20 | 90 | < th | dose dependent | rect. | 12 | 7 |
| 774 | 293.93 | wind | 3 | 270 | > th | dose dependent | rect. | 15 | 17 |
| 801 | 293.96 | temperature | 20 | 90 | < th | dose dependent | rect. | 14 | 5 |
| 865 | 294.06 | temperature | 15 | 4320 | < th | dose independent | sin | 23 | NA |
| 869 | 294.06 | temperature | 20 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 890 | 294.09 | radiation | 1 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 896 | 294.09 | radiation | 1 | 4320 | < th | dose dependent | rect. | 10 | 3 |
| 902 | 294.10 | humidity | 90 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 904 | 294.11 | radiation | 1 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 947 | 294.17 | wind | 3 | 1440 | < th | dose independent | rect. | 17 | 7 |
| 951 | 294.18 | radiation | 1 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 971 | 294.21 | wind | 5 | 270 | < th | dose independent | rect. | 11 | 17 |