Os12g0472500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutelin family protein.
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Os12g0472500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutelin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 349.36 | 0.878 | 4.45 | -0.737 | 0.94 | -2.49 | 0.727 | 1.32 | -0.974 | 8.8 | 21.4 | 959 | -- | -- |
| 351.97 | 0.874 | 4.48 | -0.975 | 1.08 | -2.66 | 0.402 | -- | -1.03 | 8.72 | 21.2 | 1115 | -- | -- |
| 349.81 | 0.871 | 4.45 | -0.733 | 1.02 | -2.55 | -- | 1.08 | -0.958 | 8.58 | 21.4 | 1063 | -- | -- |
| 352.46 | 0.874 | 4.48 | -0.968 | 1.08 | -2.67 | -- | -- | -1.03 | 8.63 | 21.23 | 1118 | -- | -- |
| 395.13 | 0.926 | 4.46 | -0.662 | -- | -2.67 | -- | 1.31 | -0.909 | -- | 21.3 | 850 | -- | -- |
| 568.68 | 1.12 | 4.64 | -2.05 | 1.28 | -- | 0.379 | -- | -1.76 | 9.4 | -- | -- | -- | -- |
| 569.2 | 1.12 | 4.64 | -2.04 | 1.28 | -- | -- | -- | -1.76 | 9.37 | -- | -- | -- | -- |
| 397.76 | 0.929 | 4.5 | -1.01 | -- | -2.75 | -- | -- | -0.996 | -- | 21.4 | 858 | -- | -- |
| 372.57 | 0.899 | 4.45 | -- | 1.1 | -3.04 | -- | -- | -0.868 | 8.42 | 21.2 | 1198 | -- | -- |
| 664.75 | 1.2 | 4.67 | -2.04 | -- | -- | -- | -- | -1.75 | -- | -- | -- | -- | -- |
| 678.64 | 1.22 | 4.59 | -- | 1.28 | -- | -- | -- | -1.53 | 9.49 | -- | -- | -- | -- |
| 421.04 | 0.956 | 4.47 | -- | -- | -3.07 | -- | -- | -0.829 | -- | 21.21 | 906 | -- | -- |
| 775.02 | 1.3 | 4.62 | -- | -- | -- | -- | -- | -1.53 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 344.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 35 | 350.34 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 60 | 352.72 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 71 | 354.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 77 | 355.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 78 | 355.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 95 | 357.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 113 | 358.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 130 | 359.43 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 17 |
| 133 | 359.59 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 139 | 359.89 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 23 |
| 156 | 360.62 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 17 |
| 167 | 361.18 | temperature | 20 | 720 | < th | dose independent | rect. | 15 | 19 |
| 231 | 362.42 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 20 |
| 252 | 362.84 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 22 |
| 312 | 363.67 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 386 | 364.75 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 18 |
| 415 | 365.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 11 |
| 443 | 365.51 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 446 | 365.53 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 23 |
| 499 | 366.08 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 516 | 366.20 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 517 | 366.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 549 | 366.60 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 569 | 366.88 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 580 | 366.99 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 587 | 367.03 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 647 | 367.70 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 23 |
| 679 | 367.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 706 | 368.26 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 825 | 369.48 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 915 | 370.21 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 23 |