Os12g0299700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0299700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.36 | 0.227 | 10.9 | -0.63 | 0.562 | -0.364 | -0.265 | 0.835 | 0.0218 | 1.8 | 20.83 | 2035 | -- | -- |
| 23.68 | 0.227 | 10.9 | -0.568 | 0.595 | -0.517 | -0.295 | -- | 0.041 | 1.62 | 19.78 | 3173 | -- | -- |
| 23.59 | 0.226 | 10.9 | -0.627 | 0.555 | -0.347 | -- | 0.778 | 0.022 | 1.83 | 20.75 | 2189 | -- | -- |
| 23.82 | 0.227 | 10.9 | -0.601 | 0.572 | -0.61 | -- | -- | 0.0283 | 1.73 | 19.6 | 3247 | -- | -- |
| 40.14 | 0.295 | 10.9 | -0.822 | -- | -0.564 | -- | 1.54 | -0.0498 | -- | 37.65 | 1018 | -- | -- |
| 27 | 0.244 | 10.9 | -0.385 | 0.57 | -- | -0.298 | -- | 0.11 | 1.75 | -- | -- | -- | -- |
| 27.35 | 0.245 | 10.9 | -0.375 | 0.57 | -- | -- | -- | 0.112 | 1.78 | -- | -- | -- | -- |
| 41.42 | 0.3 | 10.9 | -0.617 | -- | -0.741 | -- | -- | 0.0234 | -- | 19.8 | 2413 | -- | -- |
| 30.08 | 0.257 | 10.9 | -- | 0.601 | -0.275 | -- | -- | 0.125 | 1.7 | 22.85 | 1479 | -- | -- |
| 47.07 | 0.321 | 10.9 | -0.352 | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
| 31.06 | 0.261 | 10.9 | -- | 0.563 | -- | -- | -- | 0.154 | 1.77 | -- | -- | -- | -- |
| 47.91 | 0.322 | 10.9 | -- | -- | -0.365 | -- | -- | 0.0938 | -- | 26.7 | 962 | -- | -- |
| 50.33 | 0.331 | 10.9 | -- | -- | -- | -- | -- | 0.164 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.58 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 2 | 21.85 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 3 | 21.86 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 5 | 22.02 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 8 | 22.09 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 12 | 22.11 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 5 |
| 16 | 22.14 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 5 |
| 18 | 22.16 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 21 | 22.20 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 26 | 22.23 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 30 | 22.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 59 | 22.40 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 71 | 22.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 72 | 22.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 79 | 22.47 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 85 | 22.48 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 86 | 22.49 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 89 | 22.50 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 93 | 22.51 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 126 | 22.57 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 135 | 22.59 | wind | 5.0 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 145 | 22.62 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 150 | 22.64 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 151 | 22.64 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 163 | 22.68 | wind | 1.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 172 | 22.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 177 | 22.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 188 | 22.73 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 196 | 22.76 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 17 |
| 198 | 22.77 | temperature | 20.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 202 | 22.77 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 20 |
| 205 | 22.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 14 |
| 217 | 22.80 | temperature | 20.0 | 14400 | > th | dose independent | sin | 20 | NA |
| 224 | 22.80 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 22 |
| 227 | 22.80 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 229 | 22.81 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 246 | 22.83 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 22 |
| 314 | 22.90 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 345 | 22.95 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 349 | 22.95 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 356 | 22.96 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 357 | 22.97 | wind | 1.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 364 | 22.97 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 373 | 22.98 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 17 |
| 389 | 23.00 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 434 | 23.03 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 436 | 23.03 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 441 | 23.03 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 5 | 17 |
| 452 | 23.05 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 457 | 23.05 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 466 | 23.05 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 493 | 23.07 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 496 | 23.08 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 508 | 23.08 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 16 |
| 509 | 23.09 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 525 | 23.10 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 529 | 23.10 | wind | 9.0 | 4320 | < th | dose independent | rect. | 24 | 6 |
| 544 | 23.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 548 | 23.11 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 553 | 23.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 555 | 23.11 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 557 | 23.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 14 |
| 562 | 23.12 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 565 | 23.12 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 571 | 23.12 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 586 | 23.13 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 587 | 23.13 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 590 | 23.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 613 | 23.14 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 15 |
| 615 | 23.14 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 639 | 23.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 640 | 23.16 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 641 | 23.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 646 | 23.16 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 648 | 23.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 651 | 23.16 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 653 | 23.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 679 | 23.17 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 723 | 23.19 | wind | 1.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 726 | 23.19 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 751 | 23.20 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 767 | 23.20 | radiation | 40.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 768 | 23.20 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 769 | 23.20 | radiation | 1.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 777 | 23.20 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 794 | 23.21 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 824 | 23.21 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 22 |
| 826 | 23.22 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 833 | 23.22 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 22 | NA |
| 835 | 23.22 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 838 | 23.22 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 855 | 23.23 | humidity | 90.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 917 | 23.25 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 934 | 23.25 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 938 | 23.25 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 14 |
| 947 | 23.26 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 952 | 23.26 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 953 | 23.26 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 13 |
| 987 | 23.26 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 22 |
| 996 | 23.27 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 11 |