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Os12g0291400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds. (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.8 (0.0269) R2 : 0.304
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.612 (0.0648) R2dC : 0.137 R2C : 0.0864
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.593 (0.0565) R2dN8 : 0.217 R2N8 : 0.167
σ : 0.507
deviance : 117.28
__
_____
C
peak time of C : 22.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
106.18 0.484 14.8 -0.616 0.56 0.981 0.0773 -1.08 -0.587 22.3 49.99 1000 -- --
106.69 0.481 14.8 -0.585 0.555 0.736 0.0289 -- -0.607 22.3 49.76 1000 -- --
106.2 0.48 14.8 -0.619 0.56 0.98 -- -1.05 -0.588 22.3 49.9 1000 -- --
106.66 0.481 14.8 -0.572 0.561 0.705 -- -- -0.6 22.3 49.77 1000 -- --
124.41 0.519 14.8 -0.65 -- 1.28 -- -1.32 -0.562 -- 49 898 -- --
111.93 0.496 14.8 -0.435 0.615 -- 0.211 -- -0.642 22.6 -- -- -- --
112.1 0.496 14.8 -0.443 0.614 -- -- -- -0.643 22.5 -- -- -- --
125.23 0.521 14.7 -0.6 -- 0.985 -- -- -0.574 -- 50.43 921 -- --
114.67 0.499 14.7 -- 0.548 0.558 -- -- -0.539 22.4 50 911 -- --
135.28 0.543 14.8 -0.432 -- -- -- -- -0.64 -- -- -- -- --
117.28 0.507 14.8 -- 0.612 -- -- -- -0.593 22.5 -- -- -- --
133.4 0.538 14.7 -- -- 0.598 -- -- -0.519 -- 53 940 -- --
140.21 0.553 14.7 -- -- -- -- -- -0.592 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 98.88 wind 9.0 14400 < th dose independent rect. 10 1
3 99.18 wind 9.0 14400 > th dose independent rect. 10 1
5 99.43 temperature 30.0 720 < th dose independent rect. 18 13
6 99.66 humidity 70.0 720 > th dose independent rect. 19 10
10 99.99 wind 9.0 14400 < th dose independent rect. 12 1
13 100.45 humidity 70.0 720 > th dose independent rect. 19 12
14 100.53 wind 7.0 14400 > th dose dependent rect. 12 1
15 100.56 wind 1.0 720 > th dose independent rect. 13 6
16 100.56 humidity 50.0 720 > th dose independent rect. 17 14
20 100.79 temperature 30.0 720 < th dose independent rect. 18 5
22 100.82 temperature 20.0 10 > th dose dependent rect. 16 11
25 100.94 wind 7.0 14400 > th dose independent rect. 12 1
26 100.98 wind 7.0 14400 > th dose dependent rect. 10 1
28 101.01 wind 3.0 43200 < th dose independent rect. 6 1
30 101.06 wind 1.0 720 > th dose independent rect. 7 12
31 101.09 wind 7.0 14400 > th dose dependent rect. 10 3
34 101.19 wind 3.0 43200 > th dose independent rect. 6 1
37 101.21 wind 3.0 43200 < th dose dependent rect. 6 1
45 101.36 radiation 30.0 720 < th dose independent rect. 16 9
50 101.48 radiation 10.0 270 > th dose independent rect. 16 2
63 101.51 wind 3.0 14400 < th dose independent rect. 3 1
65 101.55 wind 9.0 720 < th dose independent rect. 16 9
70 101.61 temperature 10.0 720 > th dose independent rect. 16 9
72 101.61 temperature 10.0 720 > th dose independent rect. 1 15
74 101.61 temperature 25.0 90 > th dose dependent rect. 16 17
77 101.63 humidity 70.0 720 > th dose independent rect. 19 4
79 101.64 precipitation 0.1 14400 > th dose dependent rect. 3 14
82 101.66 radiation 20.0 720 < th dose independent rect. 19 12
83 101.71 wind 3.0 14400 < th dose independent rect. 2 3
91 101.75 temperature 10.0 720 > th dose independent rect. 7 12
92 101.75 temperature 10.0 720 > th dose independent rect. 19 12
95 101.75 atmosphere 995.0 720 > th dose independent rect. 19 12
96 101.75 atmosphere 1015.0 720 < th dose independent rect. 7 12
101 101.79 wind 3.0 14400 > th dose independent rect. 3 1
102 101.79 temperature 10.0 720 > th dose independent rect. 4 9
103 101.79 atmosphere 995.0 720 > th dose independent rect. 4 9
104 101.79 atmosphere 1015.0 720 < th dose independent rect. 4 9
105 101.79 temperature 10.0 720 > th dose independent rect. 13 15
107 101.80 radiation 40.0 720 < th dose dependent rect. 19 12
109 101.81 precipitation 0.1 14400 > th dose independent rect. 15 2
112 101.83 wind 3.0 14400 > th dose independent rect. 3 3
115 101.83 precipitation 0.1 14400 > th dose dependent rect. 15 2
117 101.87 atmosphere 1015.0 720 < th dose independent rect. 1 6
121 101.90 precipitation 0.1 14400 < th dose independent rect. 15 2
123 101.90 precipitation 0.1 14400 > th dose independent rect. 3 14
124 101.90 precipitation 0.1 14400 < th dose dependent rect. 15 2
125 101.91 precipitation 0.1 14400 < th dose independent rect. 3 14
126 101.91 precipitation 0.1 14400 < th dose dependent rect. 3 14
128 101.92 wind 9.0 720 < th dose independent rect. 19 12
144 102.03 wind 3.0 43200 < th dose dependent rect. 21 10
145 102.04 precipitation 0.1 4320 > th dose dependent rect. 1 16
147 102.05 humidity 70.0 720 > th dose independent rect. 19 2
151 102.06 wind 9.0 720 < th dose independent rect. 4 9
152 102.06 precipitation 0.1 4320 < th dose independent rect. 1 16
154 102.06 precipitation 0.1 4320 < th dose dependent rect. 1 16
158 102.08 precipitation 0.1 4320 > th dose independent rect. 1 16
160 102.09 wind 3.0 43200 < th dose dependent rect. 1 1
162 102.10 precipitation 0.1 720 < th dose independent rect. 24 9
164 102.10 precipitation 0.1 720 < th dose dependent rect. 24 9
172 102.13 precipitation 0.1 14400 > th dose dependent rect. 9 8
175 102.14 wind 9.0 720 < th dose independent rect. 7 12
183 102.16 precipitation 0.1 14400 > th dose dependent rect. 7 10
195 102.22 precipitation 0.1 14400 < th dose independent rect. 4 1
196 102.22 precipitation 0.1 14400 < th dose dependent rect. 4 1
197 102.22 wind 3.0 43200 < th dose dependent rect. 21 12
208 102.26 humidity 60.0 720 > th dose independent rect. 17 7
215 102.28 radiation 40.0 720 < th dose independent rect. 13 1
218 102.29 precipitation 0.1 14400 > th dose independent rect. 9 8
219 102.29 precipitation 0.1 14400 < th dose independent rect. 2 18
221 102.29 precipitation 0.1 14400 < th dose dependent rect. 2 18
228 102.31 humidity 80.0 43200 > th dose independent rect. 5 1
232 102.31 precipitation 0.1 14400 > th dose dependent rect. 19 1
235 102.32 precipitation 0.1 14400 > th dose independent rect. 3 17
238 102.33 humidity 80.0 43200 < th dose dependent rect. 4 1
241 102.35 temperature 25.0 10 > th dose dependent rect. 16 5
244 102.36 precipitation 0.1 14400 < th dose independent rect. 9 8
245 102.36 precipitation 0.1 14400 < th dose dependent rect. 9 8
255 102.40 humidity 80.0 43200 < th dose independent rect. 5 1
258 102.41 humidity 80.0 43200 < th dose independent rect. 4 3
266 102.43 wind 5.0 14400 < th dose dependent rect. 3 1
273 102.45 precipitation 0.1 4320 < th dose independent rect. 3 4
275 102.45 precipitation 0.1 14400 > th dose dependent rect. 4 1
278 102.45 precipitation 0.1 4320 < th dose dependent rect. 3 4
279 102.46 precipitation 0.1 4320 < th dose independent rect. 3 7
280 102.46 precipitation 0.1 14400 > th dose independent rect. 7 10
281 102.46 precipitation 0.1 4320 < th dose dependent rect. 3 7
296 102.50 temperature 30.0 270 < th dose independent rect. 23 11
300 102.51 precipitation 0.1 10 < th dose independent rect. 12 12
304 102.51 precipitation 0.1 10 < th dose dependent rect. 12 12
307 102.52 humidity 80.0 43200 > th dose independent rect. 3 4
310 102.53 precipitation 0.1 14400 > th dose dependent sin 3 NA
311 102.53 temperature 10.0 270 > th dose dependent rect. 3 11
316 102.55 temperature 25.0 30 > th dose independent rect. 16 3
322 102.55 precipitation 0.1 4320 > th dose dependent rect. 1 9
324 102.56 precipitation 0.1 14400 > th dose independent rect. 4 1
326 102.56 precipitation 0.1 14400 < th dose independent rect. 7 10
328 102.56 humidity 90.0 14400 > th dose dependent rect. 9 1
330 102.56 precipitation 0.1 14400 < th dose dependent rect. 7 10
333 102.57 precipitation 0.1 4320 > th dose independent rect. 3 7
336 102.58 humidity 50.0 1440 < th dose dependent rect. 16 1
345 102.60 wind 3.0 43200 < th dose dependent sin 8 NA
352 102.61 precipitation 0.1 4320 > th dose independent rect. 3 4
362 102.62 precipitation 0.1 4320 > th dose dependent rect. 1 13
379 102.63 precipitation 0.1 14400 > th dose dependent rect. 3 11
382 102.64 precipitation 0.1 14400 < th dose independent rect. 19 1
384 102.64 precipitation 0.1 14400 < th dose dependent rect. 19 1
388 102.65 precipitation 0.1 14400 < th dose independent sin 2 NA
389 102.65 humidity 50.0 1440 < th dose independent rect. 16 1
393 102.65 wind 9.0 14400 < th dose independent rect. 1 12
394 102.65 precipitation 0.1 10 < th dose independent rect. 24 12
397 102.65 precipitation 0.1 14400 < th dose dependent sin 2 NA
405 102.65 precipitation 0.1 10 < th dose dependent rect. 24 12
407 102.66 precipitation 0.1 14400 > th dose independent sin 2 NA
415 102.67 precipitation 0.1 4320 < th dose independent rect. 1 9
417 102.67 wind 3.0 43200 < th dose independent rect. 19 13
418 102.67 precipitation 0.1 4320 > th dose dependent rect. 1 6
420 102.67 precipitation 0.1 4320 < th dose dependent rect. 1 9
440 102.71 precipitation 0.1 270 < th dose independent rect. 23 11
449 102.71 precipitation 0.1 270 < th dose dependent rect. 23 11
455 102.73 precipitation 0.1 14400 > th dose independent rect. 19 1
484 102.76 atmosphere 1015.0 10 < th dose independent rect. 24 12
485 102.76 radiation 10.0 270 > th dose dependent rect. 16 2
504 102.77 precipitation 0.1 4320 < th dose independent rect. 1 13
507 102.77 precipitation 0.1 4320 < th dose dependent rect. 1 13
509 102.78 precipitation 0.1 1440 > th dose independent rect. 5 4
518 102.79 precipitation 0.1 4320 < th dose independent rect. 3 10
520 102.79 atmosphere 1015.0 720 < th dose independent rect. 1 15
525 102.79 precipitation 0.1 4320 < th dose dependent rect. 3 10
536 102.81 precipitation 0.1 4320 > th dose independent rect. 1 9
540 102.81 wind 1.0 43200 > th dose dependent rect. 6 1
541 102.81 temperature 30.0 720 < th dose dependent rect. 24 1
569 102.83 precipitation 0.1 4320 < th dose independent rect. 1 6
570 102.83 temperature 15.0 10 > th dose independent rect. 24 12
571 102.83 precipitation 0.1 720 < th dose independent rect. 7 12
573 102.83 humidity 80.0 1440 > th dose dependent rect. 8 2
575 102.83 precipitation 0.1 4320 < th dose dependent rect. 1 6
579 102.83 precipitation 0.1 720 < th dose dependent rect. 7 12
592 102.85 temperature 10.0 10 > th dose independent rect. 12 12
594 102.85 atmosphere 995.0 10 > th dose independent rect. 24 12
602 102.86 precipitation 0.1 720 < th dose independent rect. 23 20
612 102.86 precipitation 0.1 720 < th dose dependent rect. 23 20
640 102.90 precipitation 0.1 720 < th dose independent rect. 4 9
642 102.90 precipitation 0.1 4320 > th dose independent rect. 1 13
646 102.90 precipitation 0.1 720 < th dose dependent rect. 4 9
656 102.92 wind 9.0 10 < th dose independent rect. 12 12
668 102.93 wind 9.0 10 < th dose independent rect. 24 12
706 102.96 temperature 30.0 43200 > th dose dependent rect. 8 1
707 102.96 temperature 25.0 270 > th dose dependent rect. 16 1
735 102.97 precipitation 0.1 14400 > th dose dependent rect. 2 18
768 103.00 precipitation 0.1 14400 > th dose dependent rect. 23 21
777 103.01 precipitation 0.1 1440 > th dose dependent rect. 5 4
805 103.04 precipitation 0.1 720 < th dose independent rect. 7 10
812 103.04 precipitation 0.1 720 < th dose dependent rect. 7 10
814 103.04 temperature 10.0 10 > th dose dependent rect. 21 19
815 103.05 precipitation 0.1 720 < th dose independent rect. 24 1
823 103.05 precipitation 0.1 720 < th dose dependent rect. 24 1
865 103.08 humidity 90.0 14400 > th dose dependent rect. 7 3
867 103.08 wind 3.0 43200 < th dose dependent rect. 5 4
875 103.09 wind 1.0 30 > th dose independent rect. 4 12
883 103.10 precipitation 0.1 720 < th dose independent rect. 7 4
887 103.10 precipitation 0.1 720 < th dose dependent rect. 7 4
899 103.11 radiation 40.0 270 < th dose independent rect. 23 11
901 103.12 wind 3.0 43200 < th dose independent sin 10 NA
916 103.13 wind 3.0 43200 > th dose independent rect. 18 14
918 103.13 wind 9.0 720 < th dose dependent rect. 12 1
920 103.14 temperature 15.0 720 > th dose independent rect. 1 6
931 103.15 temperature 10.0 720 > th dose independent rect. 7 4
932 103.15 atmosphere 995.0 720 > th dose independent rect. 7 4
933 103.15 atmosphere 1015.0 720 < th dose independent rect. 7 4
937 103.15 precipitation 0.1 14400 > th dose independent rect. 7 13
940 103.15 temperature 10.0 720 > th dose independent rect. 11 20
951 103.16 precipitation 0.1 14400 < th dose independent rect. 7 13
956 103.16 precipitation 0.1 14400 < th dose dependent rect. 7 13
961 103.17 precipitation 0.1 14400 > th dose independent rect. 12 8
962 103.17 precipitation 0.1 14400 < th dose independent rect. 12 8
971 103.17 wind 3.0 43200 < th dose dependent rect. 23 5
973 103.17 precipitation 0.1 14400 < th dose dependent rect. 12 8
980 103.18 precipitation 0.1 14400 < th dose independent rect. 9 11
984 103.18 radiation 1.0 720 < th dose dependent rect. 18 5
986 103.18 precipitation 0.1 14400 < th dose dependent rect. 9 11
992 103.19 wind 1.0 4320 > th dose independent rect. 17 2
993 103.19 temperature 25.0 10 > th dose independent rect. 16 5