Os12g0291200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds. (Fragment).
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Os12g0291200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds. (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.66 | 0.573 | 15.6 | -1.47 | 0.582 | 1.1 | 1.4 | 3.52 | -1.32 | 2.05 | 0.2894 | 4686 | -- | -- |
| 153.14 | 0.576 | 15.6 | -1.48 | 0.594 | 1.36 | 1.5 | -- | -1.31 | 2.01 | 0.8805 | 2260 | -- | -- |
| 155.95 | 0.582 | 15.6 | -1.52 | 0.584 | 1.05 | -- | 3.47 | -1.32 | 1.71 | 0.4361 | 4685 | -- | -- |
| 160.91 | 0.591 | 15.6 | -1.53 | 0.595 | 1.28 | -- | -- | -1.31 | 1.61 | 0.9996 | 2260 | -- | -- |
| 162.79 | 0.594 | 15.7 | -1.36 | -- | 0.733 | -- | 3.19 | -1.25 | -- | 1.492 | 19887 | -- | -- |
| 178.64 | 0.627 | 15.6 | -1.86 | 0.567 | -- | 1.2 | -- | -1.22 | 1.95 | -- | -- | -- | -- |
| 184.08 | 0.635 | 15.6 | -1.9 | 0.566 | -- | -- | -- | -1.23 | 1.68 | -- | -- | -- | -- |
| 170.75 | 0.609 | 15.7 | -1.71 | -- | 1.08 | -- | -- | -1.57 | -- | 2.5 | 30073 | -- | -- |
| 212.75 | 0.679 | 15.6 | -- | 0.593 | 2.03 | -- | -- | -1.22 | 1.57 | 0.4488 | 2260 | -- | -- |
| 203.63 | 0.667 | 15.6 | -1.88 | -- | -- | -- | -- | -1.22 | -- | -- | -- | -- | -- |
| 279.23 | 0.782 | 15.5 | -- | 0.532 | -- | -- | -- | -1.02 | 1.57 | -- | -- | -- | -- |
| 234.09 | 0.713 | 15.6 | -- | -- | 1.96 | -- | -- | -1.2 | -- | 0.4839 | 2260 | -- | -- |
| 296.57 | 0.804 | 15.5 | -- | -- | -- | -- | -- | -1.01 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.34 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 2 | 136.34 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 5 | 136.92 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 7 | 137.45 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 12 | 137.78 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 22 | 138.96 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 25 | 139.03 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 37 | 139.37 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 71 | 140.43 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 112 | 141.23 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 113 | 141.25 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 127 | 141.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 139 | 141.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 140 | 141.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 142 | 141.77 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 168 | 142.30 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 18 |
| 176 | 142.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 179 | 142.51 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 186 | 142.58 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 187 | 142.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 2 | 18 |
| 188 | 142.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 2 | 18 |
| 191 | 142.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 2 | 18 |
| 196 | 142.65 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 201 | 142.72 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 22 | 22 |
| 203 | 142.74 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 22 | 22 |
| 205 | 142.74 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 22 | 22 |
| 215 | 142.87 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 234 | 142.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 235 | 142.99 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 17 |
| 238 | 142.99 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 17 |
| 241 | 143.00 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 9 |
| 244 | 143.01 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 252 | 143.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 257 | 143.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 264 | 143.07 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 23 | 18 |
| 275 | 143.13 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 277 | 143.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 293 | 143.19 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 300 | 143.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 2 | 22 |
| 304 | 143.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 2 | 22 |
| 305 | 143.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 2 | 22 |
| 310 | 143.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 23 | 18 |
| 311 | 143.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 23 | 18 |
| 322 | 143.31 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 324 | 143.31 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 326 | 143.32 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 345 | 143.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 20 |
| 347 | 143.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 20 |
| 351 | 143.40 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 356 | 143.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 21 |
| 369 | 143.44 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 10 |
| 373 | 143.45 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 399 | 143.48 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 13 |
| 417 | 143.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 421 | 143.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 477 | 143.69 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 18 |
| 491 | 143.73 | humidity | 70.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 496 | 143.73 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 19 |
| 521 | 143.75 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 13 |
| 535 | 143.77 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 542 | 143.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 557 | 143.84 | humidity | 80.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 571 | 143.88 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 572 | 143.88 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 591 | 143.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 596 | 143.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 603 | 143.93 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 604 | 143.93 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 606 | 143.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 607 | 143.93 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 625 | 143.94 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 626 | 143.94 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 9 |
| 634 | 143.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 636 | 143.97 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 639 | 143.97 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 641 | 143.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 748 | 144.12 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 769 | 144.14 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 832 | 144.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 859 | 144.25 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 870 | 144.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 882 | 144.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 901 | 144.31 | humidity | 70.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 936 | 144.36 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 5 | NA |
| 957 | 144.39 | humidity | 80.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 992 | 144.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |