Os12g0290600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC 3.1.3.16) (Neuronal tyrosine threonine phosphatase 1).
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Os12g0290600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dual specificity protein phosphatase 8 (EC 3.1.3.48) (EC 3.1.3.16) (Neuronal tyrosine threonine phosphatase 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.29 | 0.206 | 11.4 | -0.0686 | 0.588 | 0.375 | -0.151 | 0.191 | -0.1 | 21.3 | 21.91 | 867 | -- | -- |
| 19.33 | 0.205 | 11.4 | -0.108 | 0.586 | 0.355 | -0.0837 | -- | -0.117 | 21.3 | 22.26 | 856 | -- | -- |
| 19.32 | 0.205 | 11.4 | -0.0614 | 0.592 | 0.351 | -- | 0.139 | -0.102 | 21.3 | 22.24 | 847 | -- | -- |
| 19.36 | 0.205 | 11.4 | -0.109 | 0.591 | 0.355 | -- | -- | -0.116 | 21.3 | 22.27 | 853 | -- | -- |
| 38.39 | 0.289 | 11.4 | -0.202 | -- | 0.508 | -- | 0.00692 | -0.143 | -- | 21.9 | 780 | -- | -- |
| 24.83 | 0.234 | 11.4 | 0.00386 | 0.657 | -- | -0.0878 | -- | 0.00337 | 21.4 | -- | -- | -- | -- |
| 24.86 | 0.233 | 11.4 | 0.00717 | 0.658 | -- | -- | -- | 0.00354 | 21.4 | -- | -- | -- | -- |
| 34.94 | 0.275 | 11.4 | -0.148 | -- | 0.543 | -- | -- | -0.151 | -- | 24.89 | 705 | -- | -- |
| 19.65 | 0.206 | 11.4 | -- | 0.595 | 0.336 | -- | -- | -0.099 | 21.3 | 22.2 | 856 | -- | -- |
| 50.23 | 0.331 | 11.4 | 0.011 | -- | -- | -- | -- | 0.0013 | -- | -- | -- | -- | -- |
| 24.86 | 0.233 | 11.4 | -- | 0.658 | -- | -- | -- | 0.00274 | 21.4 | -- | -- | -- | -- |
| 35.36 | 0.277 | 11.4 | -- | -- | 0.544 | -- | -- | -0.185 | -- | 24.9 | 720 | -- | -- |
| 50.23 | 0.331 | 11.4 | -- | -- | -- | -- | -- | 7.54e-05 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 3 | 19.63 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 4 | 19.64 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 5 | 19.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 19.69 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 11 | 19.70 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 16 | 19.72 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 46 | 19.82 | temperature | 25.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 54 | 19.84 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 68 | 19.86 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 76 | 19.88 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 87 | 19.89 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 88 | 19.89 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 98 | 19.90 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 101 | 19.91 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 120 | 19.94 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 22 | 7 |
| 130 | 19.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 131 | 19.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 194 | 20.04 | temperature | 15.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 223 | 20.08 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 234 | 20.09 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 301 | 20.18 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 12 |
| 326 | 20.20 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 335 | 20.21 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 338 | 20.22 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 354 | 20.23 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 401 | 20.27 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 440 | 20.31 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 482 | 20.35 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 488 | 20.35 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 528 | 20.38 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 530 | 20.38 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 15 | NA |
| 572 | 20.41 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 617 | 20.44 | temperature | 20.0 | 720 | < th | dose independent | rect. | 24 | 7 |
| 632 | 20.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 648 | 20.46 | temperature | 25.0 | 720 | < th | dose dependent | sin | 23 | NA |
| 672 | 20.47 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 696 | 20.49 | temperature | 20.0 | 720 | > th | dose independent | sin | 10 | NA |
| 697 | 20.49 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 704 | 20.49 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 705 | 20.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 715 | 20.49 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 17 |
| 812 | 20.54 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 834 | 20.56 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 890 | 20.58 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 21 |
| 914 | 20.59 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 932 | 20.59 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 978 | 20.61 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 21 |
| 995 | 20.61 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |