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Os12g0278800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Zinc finger CCCH type domain containing protein ZFN-like 1. Splice isoform 3.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0158) R2 : 0.58
β1 : 1.2 (0.0579) R2dD : 0.412 R2D : 0.19
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.6 (0.0337) R2dN8 : 0.39 R2N8 : 0.168
σ : 0.297
deviance : 40.28
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.6 0.272 10.9 0.183 0.117 0.559 0.162 -8.02 0.509 1.34 29.22 917 -- --
37.1 0.284 10.8 1.26 0.113 -0.3 0.12 -- 0.571 1.72 31.1 1863 -- --
33.7 0.27 10.9 0.181 0.117 0.565 -- -8.01 0.511 1.62 29.25 917 -- --
36.5 0.281 10.8 1.26 0.123 -0.303 -- -- 0.552 1.71 29.9 962 -- --
34.5 0.274 10.9 0.209 -- 0.577 -- -7.99 0.516 -- 29.23 900 -- --
39.8 0.296 10.8 1.2 0.0907 -- 0.0431 -- 0.598 2.71 -- -- -- --
39.8 0.295 10.8 1.2 0.0907 -- -- -- 0.598 2.64 -- -- -- --
37.32 0.285 10.8 1.26 -- -0.297 -- -- 0.561 -- 30.98 900 -- --
77.17 0.409 10.8 -- 0.0923 -0.185 -- -- 0.452 1.08 30.84 376 -- --
40.28 0.297 10.8 1.2 -- -- -- -- 0.6 -- -- -- -- --
77.67 0.412 10.8 -- 0.114 -- -- -- 0.464 2.77 -- -- -- --
77.67 0.41 10.8 -- -- -0.215 -- -- 0.452 -- 30.87 283 -- --
78.43 0.413 10.8 -- -- -- -- -- 0.467 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.68 precipitation 0.1 43200 > th dose dependent rect. 17 3
4 33.06 wind 7.0 43200 < th dose independent rect. 19 1
5 33.06 wind 7.0 43200 > th dose independent rect. 17 5
6 33.09 wind 7.0 43200 < th dose independent rect. 17 5
21 33.36 wind 7.0 43200 > th dose independent rect. 19 1
23 33.40 wind 7.0 43200 > th dose dependent rect. 16 6
33 33.46 wind 7.0 43200 > th dose independent rect. 15 14
39 33.49 wind 7.0 43200 > th dose independent rect. 15 18
52 33.54 wind 1.0 14400 < th dose independent rect. 24 6
55 33.55 wind 7.0 43200 < th dose independent rect. 15 14
59 33.56 wind 7.0 43200 < th dose independent rect. 15 18
65 33.59 humidity 50.0 14400 > th dose independent rect. 15 2
71 33.59 wind 7.0 43200 < th dose independent rect. 15 16
73 33.59 humidity 50.0 14400 > th dose independent rect. 15 20
79 33.62 wind 1.0 14400 > th dose independent rect. 24 6
94 33.66 temperature 25.0 4320 < th dose independent rect. 5 1
99 33.66 wind 7.0 43200 > th dose dependent rect. 16 15
105 33.68 humidity 50.0 14400 < th dose independent rect. 15 2
110 33.69 humidity 50.0 14400 > th dose independent sin 12 NA
128 33.72 humidity 50.0 14400 < th dose independent sin 12 NA
153 33.76 wind 1.0 1440 > th dose independent rect. 3 2
157 33.77 humidity 70.0 1440 > th dose independent rect. 17 1
173 33.80 wind 7.0 43200 > th dose dependent rect. 17 1
187 33.85 humidity 50.0 14400 > th dose independent rect. 15 8
192 33.87 wind 7.0 43200 > th dose independent sin 13 NA
199 33.87 humidity 50.0 14400 > th dose independent rect. 15 13
201 33.87 humidity 50.0 14400 < th dose independent rect. 15 20
202 33.88 temperature 30.0 1440 > th dose independent rect. 9 6
205 33.88 humidity 50.0 14400 > th dose independent rect. 15 16
210 33.89 wind 7.0 43200 < th dose independent sin 13 NA
212 33.89 temperature 30.0 1440 > th dose independent rect. 18 21
214 33.92 temperature 25.0 4320 > th dose independent rect. 5 2
219 33.92 precipitation 0.1 14400 > th dose dependent rect. 5 13
240 33.95 wind 1.0 14400 < th dose independent rect. 5 1
243 33.96 temperature 30.0 1440 > th dose independent sin 2 NA
245 33.97 wind 1.0 14400 > th dose independent rect. 24 3
299 33.99 wind 1.0 14400 < th dose dependent rect. 24 5
319 34.00 temperature 30.0 720 < th dose independent rect. 20 23
343 34.03 temperature 30.0 1440 > th dose independent rect. 13 23
345 34.04 temperature 30.0 1440 > th dose independent no NA NA
473 34.07 wind 5.0 43200 > th dose dependent rect. 19 1
476 34.09 temperature 30.0 1440 < th dose independent sin 4 NA
499 34.10 wind 7.0 43200 > th dose dependent sin 13 NA
510 34.11 precipitation 0.1 43200 > th dose dependent rect. 19 2
513 34.12 temperature 30.0 1440 < th dose independent rect. 9 6
527 34.13 temperature 30.0 1440 < th dose independent rect. 18 21
534 34.14 temperature 30.0 720 < th dose independent rect. 7 18
542 34.15 temperature 30.0 1440 < th dose independent rect. 2 13
549 34.16 temperature 30.0 1440 < th dose independent rect. 5 10
553 34.16 temperature 30.0 1440 < th dose independent rect. 22 17
555 34.16 temperature 30.0 1440 < th dose independent rect. 18 23
561 34.17 temperature 30.0 1440 < th dose independent rect. 9 10
565 34.17 temperature 30.0 1440 < th dose independent rect. 9 14
571 34.17 temperature 30.0 1440 < th dose independent rect. 9 21
595 34.19 precipitation 0.1 43200 < th dose independent rect. 16 2
636 34.19 precipitation 0.1 43200 < th dose dependent rect. 16 2
690 34.20 temperature 30.0 1440 < th dose independent rect. 13 23
696 34.21 temperature 30.0 1440 < th dose independent no NA NA
741 34.22 precipitation 0.1 43200 > th dose independent rect. 16 2
778 34.24 wind 1.0 14400 < th dose independent rect. 24 3
794 34.25 wind 1.0 43200 > th dose independent rect. 8 1
795 34.25 humidity 60.0 14400 > th dose independent rect. 10 1
913 34.35 wind 1.0 1440 < th dose independent rect. 3 2