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Os12g0273300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Disease resistance protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.43 (0.0283) R2 : 0.185
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.543 (0.074) R2dC : 0.0967 R2C : 0.0758
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.409 (0.0594) R2dN8 : 0.109 R2N8 : 0.0884
σ : 0.533
deviance : 129.6
__
_____
C
peak time of C : 18.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
102.19 0.475 6.41 0.534 0.545 -0.98 -0.227 -2.21 -0.348 18.8 50 2841 -- --
106.19 0.48 6.42 0.649 0.554 -0.929 -0.163 -- -0.342 18.7 50 2791 -- --
101.72 0.47 6.43 0.548 0.525 -1.23 -- -2.99 -0.397 18.6 52.23 2841 -- --
106.24 0.48 6.41 0.655 0.56 -0.932 -- -- -0.337 18.6 50 2807 -- --
117.15 0.504 6.42 0.493 -- -1.42 -- -3.35 -0.412 -- 52.99 2840 -- --
118 0.509 6.41 0.663 0.552 -- -0.00139 -- -0.335 18.2 -- -- -- --
118 0.509 6.41 0.663 0.552 -- -- -- -0.335 18.2 -- -- -- --
122.06 0.515 6.4 0.637 -- -0.939 -- -- -0.349 -- 50 2840 -- --
116.6 0.503 6.41 -- 0.559 -0.881 -- -- -0.356 18.3 49.31 6392 -- --
133.81 0.541 6.4 0.648 -- -- -- -- -0.347 -- -- -- -- --
129.6 0.533 6.43 -- 0.543 -- -- -- -0.409 18.3 -- -- -- --
132.08 0.535 6.4 -- -- -0.908 -- -- -0.354 -- 50 7140 -- --
144.9 0.562 6.42 -- -- -- -- -- -0.419 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 99.98 radiation 10.0 14400 < th dose dependent rect. 22 5
3 101.55 temperature 15.0 270 > th dose independent rect. 1 18
5 101.75 wind 5.0 14400 > th dose independent rect. 18 1
6 101.79 temperature 15.0 270 > th dose independent rect. 24 20
9 101.92 humidity 90.0 14400 > th dose dependent rect. 2 1
10 101.99 wind 9.0 270 < th dose independent rect. 24 20
11 102.00 humidity 90.0 14400 > th dose dependent rect. 1 3
12 102.01 wind 9.0 270 < th dose independent rect. 1 18
15 102.12 humidity 90.0 14400 > th dose independent rect. 2 2
16 102.26 wind 5.0 14400 < th dose independent rect. 18 1
23 102.39 atmosphere 1000.0 270 > th dose independent rect. 24 6
26 102.44 precipitation 0.1 270 < th dose independent rect. 19 6
27 102.44 precipitation 0.1 270 < th dose dependent rect. 19 6
30 102.51 temperature 10.0 270 > th dose independent rect. 19 6
31 102.51 temperature 30.0 270 < th dose independent rect. 19 6
32 102.51 humidity 50.0 270 > th dose independent rect. 19 6
33 102.51 atmosphere 995.0 270 > th dose independent rect. 19 6
34 102.51 radiation 1.0 270 < th dose independent rect. 19 6
40 102.51 atmosphere 1015.0 270 < th dose independent rect. 1 18
41 102.51 radiation 1.0 270 < th dose dependent rect. 19 6
47 102.54 temperature 10.0 270 > th dose independent rect. 20 4
48 102.54 temperature 30.0 270 < th dose independent rect. 20 4
49 102.54 humidity 50.0 270 > th dose independent rect. 20 4
52 102.54 atmosphere 995.0 270 > th dose independent rect. 20 4
53 102.54 radiation 1.0 270 < th dose independent rect. 20 4
58 102.54 precipitation 0.1 270 < th dose independent rect. 20 4
61 102.54 atmosphere 1015.0 270 < th dose independent rect. 24 20
62 102.54 radiation 1.0 270 < th dose dependent rect. 20 4
67 102.54 precipitation 0.1 270 < th dose dependent rect. 20 4
71 102.57 wind 9.0 270 < th dose independent rect. 19 6
72 102.58 wind 7.0 43200 > th dose dependent rect. 18 1
74 102.60 wind 9.0 270 < th dose independent rect. 20 4
75 102.60 humidity 80.0 43200 > th dose independent rect. 7 5
81 102.66 humidity 50.0 270 > th dose independent rect. 1 18
83 102.68 humidity 80.0 43200 < th dose independent rect. 7 6
85 102.68 humidity 90.0 14400 > th dose dependent rect. 1 15
92 102.76 humidity 90.0 14400 > th dose independent rect. 2 5
104 102.83 humidity 80.0 43200 < th dose independent rect. 8 4
113 102.89 humidity 90.0 14400 < th dose independent rect. 6 1
138 102.91 atmosphere 995.0 270 > th dose dependent rect. 24 6
155 103.05 humidity 80.0 43200 > th dose independent rect. 8 3
206 103.11 precipitation 0.1 43200 > th dose dependent rect. 23 6
221 103.19 precipitation 0.1 270 < th dose independent rect. 7 17
222 103.19 wind 3.0 14400 > th dose dependent rect. 18 1
223 103.19 precipitation 0.1 270 < th dose dependent rect. 7 17
225 103.21 humidity 90.0 14400 < th dose independent rect. 2 6
227 103.21 atmosphere 995.0 270 > th dose independent rect. 1 18
234 103.22 precipitation 0.1 43200 < th dose independent rect. 3 10
235 103.22 radiation 1.0 270 < th dose independent rect. 24 19
236 103.22 atmosphere 995.0 270 > th dose independent rect. 24 20
237 103.22 precipitation 0.1 43200 < th dose dependent rect. 3 10
241 103.24 humidity 90.0 14400 < th dose independent rect. 24 9
242 103.25 precipitation 0.1 43200 > th dose independent rect. 23 6
243 103.25 precipitation 0.1 43200 > th dose independent rect. 3 10
247 103.26 precipitation 0.1 43200 > th dose dependent rect. 3 10
252 103.27 humidity 70.0 43200 > th dose dependent rect. 7 5
258 103.29 precipitation 0.1 43200 > th dose dependent rect. 24 13
271 103.33 precipitation 0.1 43200 < th dose independent rect. 4 1
272 103.33 wind 1.0 270 > th dose independent rect. 1 4
273 103.33 precipitation 0.1 43200 < th dose dependent rect. 4 1
286 103.37 precipitation 0.1 43200 < th dose independent rect. 1 4
288 103.37 precipitation 0.1 43200 < th dose dependent rect. 1 4
293 103.38 humidity 90.0 14400 > th dose dependent sin 4 NA
299 103.40 precipitation 0.1 43200 < th dose independent rect. 23 6
301 103.40 precipitation 0.1 43200 < th dose dependent rect. 23 6
304 103.41 wind 1.0 270 > th dose independent rect. 20 4
306 103.41 precipitation 0.1 43200 > th dose dependent rect. 2 14
307 103.41 radiation 1.0 270 < th dose dependent rect. 1 18
309 103.42 precipitation 0.1 270 < th dose independent rect. 1 18
312 103.42 precipitation 0.1 270 < th dose dependent rect. 1 18
314 103.43 precipitation 0.1 43200 > th dose independent rect. 2 14
316 103.43 precipitation 0.1 43200 < th dose independent rect. 2 14
317 103.43 humidity 90.0 14400 < th dose independent rect. 23 17
319 103.43 precipitation 0.1 43200 < th dose dependent rect. 2 14
333 103.46 wind 9.0 270 < th dose dependent rect. 20 4
348 103.48 precipitation 0.1 43200 > th dose dependent rect. 23 17
355 103.50 precipitation 0.1 43200 > th dose independent rect. 4 1
387 103.55 humidity 90.0 14400 > th dose independent rect. 6 1
393 103.56 humidity 90.0 14400 > th dose independent rect. 24 15
401 103.57 precipitation 0.1 270 < th dose independent rect. 24 20
402 103.57 humidity 90.0 14400 > th dose dependent rect. 5 10
405 103.57 precipitation 0.1 270 < th dose dependent rect. 24 20
408 103.58 precipitation 0.1 43200 > th dose independent rect. 23 16
416 103.59 wind 7.0 270 < th dose independent rect. 24 7
431 103.60 precipitation 0.1 43200 > th dose dependent rect. 4 1
433 103.60 radiation 40.0 270 < th dose dependent rect. 24 7
451 103.62 precipitation 0.1 43200 < th dose independent rect. 4 7
453 103.62 precipitation 0.1 43200 < th dose dependent rect. 4 7
458 103.63 precipitation 0.1 43200 < th dose independent rect. 23 16
462 103.63 precipitation 0.1 43200 < th dose dependent rect. 23 16
465 103.64 wind 9.0 10 < th dose independent rect. 3 18
474 103.65 wind 9.0 270 < th dose dependent rect. 7 17
478 103.66 atmosphere 1015.0 270 < th dose independent rect. 24 7
483 103.67 temperature 10.0 270 > th dose independent rect. 24 7
485 103.67 temperature 30.0 270 < th dose independent rect. 24 7
486 103.67 humidity 50.0 270 > th dose independent rect. 24 7
489 103.67 radiation 20.0 270 < th dose independent rect. 24 7
493 103.67 temperature 10.0 270 > th dose independent rect. 7 17
569 103.73 precipitation 0.1 43200 > th dose independent sin 4 NA
570 103.73 precipitation 0.1 43200 < th dose independent sin 4 NA
571 103.73 wind 9.0 43200 > th dose independent rect. 18 1
572 103.73 precipitation 0.1 43200 > th dose independent rect. 22 8
578 103.73 precipitation 0.1 43200 < th dose dependent sin 4 NA
584 103.74 humidity 70.0 43200 > th dose independent rect. 13 2
605 103.77 precipitation 0.1 14400 > th dose independent rect. 23 2
610 103.77 precipitation 0.1 14400 > th dose dependent rect. 23 2
649 103.82 atmosphere 1000.0 10 > th dose independent rect. 2 6
671 103.85 humidity 80.0 43200 > th dose independent rect. 9 1
672 103.85 humidity 90.0 14400 < th dose independent rect. 4 3
685 103.85 wind 1.0 270 > th dose independent rect. 24 6
689 103.85 wind 9.0 270 < th dose independent rect. 14 15
695 103.86 wind 1.0 270 > th dose independent rect. 19 6
711 103.87 precipitation 0.1 43200 > th dose dependent sin 5 NA
816 103.95 precipitation 0.1 270 < th dose independent rect. 24 7
818 103.95 precipitation 0.1 270 < th dose independent rect. 5 9
820 103.95 humidity 90.0 14400 > th dose dependent rect. 5 3
822 103.95 precipitation 0.1 270 < th dose dependent rect. 24 7
824 103.95 precipitation 0.1 270 < th dose dependent rect. 5 9
836 103.97 temperature 10.0 270 > th dose independent rect. 5 9
838 103.97 atmosphere 995.0 270 > th dose independent rect. 5 9
839 103.97 atmosphere 1015.0 270 < th dose independent rect. 5 9
840 103.97 temperature 10.0 270 > th dose independent rect. 14 15
848 103.98 wind 1.0 43200 < th dose independent rect. 17 2
851 103.98 radiation 40.0 270 < th dose independent rect. 15 14
909 104.06 wind 1.0 43200 > th dose independent rect. 17 3
933 104.07 humidity 50.0 270 > th dose dependent rect. 20 4
962 104.10 wind 5.0 270 < th dose independent rect. 7 17
963 104.10 temperature 25.0 14400 > th dose dependent rect. 1 2