BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0273300 Os12g0273300|AK065346
         (880 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07040.1  | chr3:2226244-2229024 REVERSE LENGTH=927            244   2e-64
AT3G46710.1  | chr3:17206489-17209032 REVERSE LENGTH=848          220   3e-57
AT3G50950.2  | chr3:18936127-18938685 FORWARD LENGTH=853          201   1e-51
AT3G46730.1  | chr3:17213069-17215612 REVERSE LENGTH=848          199   7e-51
AT1G50180.1  | chr1:18584235-18587136 FORWARD LENGTH=858          197   3e-50
AT3G46530.1  | chr3:17130739-17133246 REVERSE LENGTH=836          196   3e-50
AT1G53350.1  | chr1:19903899-19907515 FORWARD LENGTH=928          187   2e-47
AT1G58390.1  | chr1:21690962-21693891 REVERSE LENGTH=908          184   2e-46
AT5G43470.1  | chr5:17463130-17466658 REVERSE LENGTH=909          183   3e-46
AT5G35450.1  | chr5:13667809-13670685 FORWARD LENGTH=902          183   4e-46
AT5G48620.1  | chr5:19717406-19720932 FORWARD LENGTH=909          180   3e-45
AT3G14470.1  | chr3:4857940-4861104 FORWARD LENGTH=1055           180   3e-45
AT1G58410.1  | chr1:21701286-21704255 REVERSE LENGTH=900          179   8e-45
AT1G59780.1  | chr1:21993581-21997691 REVERSE LENGTH=907          177   3e-44
AT1G58400.1  | chr1:21696165-21699118 REVERSE LENGTH=901          174   2e-43
AT1G59124.1  | chr1:21816832-21819653 FORWARD LENGTH=856          173   4e-43
AT1G58807.1  | chr1:21780574-21783793 FORWARD LENGTH=1018         172   5e-43
AT1G59218.1  | chr1:21828398-21831713 FORWARD LENGTH=1050         170   3e-42
AT1G58848.1  | chr1:21792140-21795455 FORWARD LENGTH=1050         170   3e-42
AT1G59620.1  | chr1:21902627-21905527 FORWARD LENGTH=843          161   1e-39
AT1G58602.1  | chr1:21760167-21763765 FORWARD LENGTH=1139         160   2e-39
AT1G10920.1  | chr1:3644587-3647004 REVERSE LENGTH=728            155   1e-37
AT3G14460.1  | chr3:4851990-4856264 REVERSE LENGTH=1425           151   1e-36
AT1G63350.1  | chr1:23494935-23497631 REVERSE LENGTH=899          124   2e-28
AT1G12220.1  | chr1:4145011-4147680 FORWARD LENGTH=890            122   6e-28
AT5G05400.1  | chr5:1597745-1600369 REVERSE LENGTH=875            122   9e-28
AT5G47250.1  | chr5:19186045-19188576 REVERSE LENGTH=844          119   6e-27
AT5G63020.1  | chr5:25283252-25286002 REVERSE LENGTH=889          113   4e-25
AT1G61180.2  | chr1:22551486-22554185 FORWARD LENGTH=900          112   1e-24
AT1G12210.1  | chr1:4140948-4143605 FORWARD LENGTH=886            109   6e-24
AT5G43740.1  | chr5:17566010-17568598 FORWARD LENGTH=863          109   8e-24
AT1G62630.1  | chr1:23185912-23188593 FORWARD LENGTH=894          108   1e-23
AT5G43730.1  | chr5:17560267-17562813 FORWARD LENGTH=849          106   5e-23
AT4G27220.1  | chr4:13633953-13636712 REVERSE LENGTH=920          106   7e-23
AT4G27190.1  | chr4:13620977-13623934 REVERSE LENGTH=986          105   8e-23
AT1G61190.1  | chr1:22557602-22560687 FORWARD LENGTH=968          104   2e-22
AT1G61310.1  | chr1:22613166-22615943 REVERSE LENGTH=926          103   3e-22
AT1G61300.1  | chr1:22607714-22610175 REVERSE LENGTH=763          103   4e-22
AT1G12280.1  | chr1:4174875-4177559 REVERSE LENGTH=895            103   6e-22
AT4G26090.1  | chr4:13224596-13227325 FORWARD LENGTH=910          100   3e-21
AT1G12290.1  | chr1:4178593-4181247 REVERSE LENGTH=885            100   3e-21
AT1G63360.1  | chr1:23499515-23502169 REVERSE LENGTH=885           98   2e-20
AT4G10780.1  | chr4:6634779-6637457 REVERSE LENGTH=893             96   9e-20
AT5G47260.1  | chr5:19189411-19192516 FORWARD LENGTH=949           96   1e-19
AT1G51480.1  | chr1:19090847-19094306 REVERSE LENGTH=942           91   3e-18
AT1G15890.1  | chr1:5461406-5463961 FORWARD LENGTH=852             89   7e-18
AT5G66910.1  | chr5:26718338-26721133 REVERSE LENGTH=816           83   5e-16
AT5G66900.1  | chr5:26714931-26717757 REVERSE LENGTH=810           74   3e-13
AT1G17600.1  | chr1:6053026-6056572 REVERSE LENGTH=1050            74   4e-13
AT4G12010.1  | chr4:7197325-7201393 REVERSE LENGTH=1220            71   2e-12
AT1G63880.1  | chr1:23712514-23716047 REVERSE LENGTH=1018          67   4e-11
AT5G45050.1  | chr5:18177016-18181805 REVERSE LENGTH=1373          63   6e-10
AT5G45260.1  | chr5:18326277-18332229 FORWARD LENGTH=1289          63   8e-10
AT5G41740.2  | chr5:16688687-16692801 FORWARD LENGTH=1115          62   1e-09
AT5G17680.1  | chr5:5822999-5827153 FORWARD LENGTH=1295            59   9e-09
AT5G48770.1  | chr5:19773277-19777242 REVERSE LENGTH=1191          59   1e-08
AT5G04720.1  | chr5:1360748-1363665 FORWARD LENGTH=812             58   3e-08
AT1G63740.1  | chr1:23645525-23648807 FORWARD LENGTH=993           57   4e-08
AT1G27170.1  | chr1:9434718-9439219 FORWARD LENGTH=1385            56   1e-07
AT1G63750.3  | chr1:23650940-23655333 FORWARD LENGTH=1132          55   1e-07
AT5G48780.1  | chr5:19777511-19779604 FORWARD LENGTH=670           55   2e-07
AT5G17890.1  | chr5:5917015-5923160 FORWARD LENGTH=1614            54   4e-07
AT5G41550.1  | chr5:16617232-16620785 REVERSE LENGTH=1086          54   4e-07
AT5G45210.1  | chr5:18295521-18298434 FORWARD LENGTH=698           54   5e-07
AT5G45500.1  | chr5:18432636-18434951 REVERSE LENGTH=772           53   8e-07
AT1G27180.1  | chr1:9439859-9445818 FORWARD LENGTH=1557            52   1e-06
AT4G09430.1  | chr4:5970932-5975375 FORWARD LENGTH=1040            50   4e-06
AT3G04220.1  | chr3:1109118-1112188 REVERSE LENGTH=868             50   8e-06
AT3G51560.1  | chr3:19121808-19125913 REVERSE LENGTH=1254          50   8e-06
AT5G36930.2  | chr5:14567771-14571916 REVERSE LENGTH=1192          49   9e-06
>AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927
          Length = 926

 Score =  244 bits (622), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 220/864 (25%), Positives = 408/864 (47%), Gaps = 98/864 (11%)

Query: 12  VRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLWSRHQIANQIQELKARVKEES 71
            R+L+Y IED +D F + ++ G      + +     R +W+RH IA ++  +   ++  S
Sbjct: 71  TRDLAYQIEDILDEFGYHIH-GYRSCAKIWRAFHFPRYMWARHSIAQKLGMVNVMIQSIS 129

Query: 72  DRRLRYYFSECNAHVDGTKIDP---------RLPALYVEEEKLVGIHGPMEEIIELLMKE 122
           D   RYY SE         ID             +L+  E  LVGI  P  ++I  L+  
Sbjct: 130 DSMKRYYHSENYQAALLPPIDDGDAKWVNNISESSLFFSENSLVGIDAPKGKLIGRLLSP 189

Query: 123 DGSGQKLKVVSIVGFGGLGKTTLANQVY--NKIKDQFDCSAFISVSQSPNIKKILFDMLK 180
           +   Q++ VV++VG GG GKTTL+  ++    ++  F+  A++++S+S  I+ +   M+K
Sbjct: 190 EP--QRI-VVAVVGMGGSGKTTLSANIFKSQSVRRHFESYAWVTISKSYVIEDVFRTMIK 246

Query: 181 DVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVR 240
           +     ++    ++  +G         R+L+ KL  +L++KRY +++DD+W+   W  + 
Sbjct: 247 EFYKEADTQIPAELYSLGY--------RELVEKLVEYLQSKRYIVVLDDVWTTGLWREIS 298

Query: 241 LALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHS--DSN 298
           +ALP+    SR++ TTR++NVA S   G   + + I+ L E ++  LF  + F +  +  
Sbjct: 299 IALPDGIYGSRVMMTTRDMNVA-SFPYGIGSTKHEIELLKEDEAWVLFSNKAFPASLEQC 357

Query: 299 FPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAFSSQG----M 354
              +LE ++  ++++C G P            K   + +W++V+++L+   ++      +
Sbjct: 358 RTQNLEPIARKLVERCQGLPLAIASLGSMMSTKK-FESEWKKVYSTLNWELNNNHELKIV 416

Query: 355 SDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQVGGS 414
             I+ LS+ DLPY LK C LY S+FP +Y++ R  LI  W+A+ F+  ++G   ++V  S
Sbjct: 417 RSIMFLSFNDLPYPLKRCFLYCSLFPVNYRMKRKRLIRMWMAQRFVEPIRGVKAEEVADS 476

Query: 415 YFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVV------DEQGYK 468
           Y NEL+ RNM+Q I     G   A ++HD++  + +S+S  E F  V       D+    
Sbjct: 477 YLNELVYRNMLQVILWNPFGRPKAFKMHDVIWEIALSVSKLERFCDVYNDDSDGDDAAET 536

Query: 469 YLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLV 528
                 R L  Q     + +        NL  +   S  +   ++ P     SL++L  +
Sbjct: 537 MENYGSRHLCIQKEMTPDSIRAT-----NLHSLLVCSSAKHKMELLP-----SLNLLRAL 586

Query: 529 DYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTV 588
           D +    +     L + F LKYL ++   + +LP  F  L  L+TL+ + S IE+ P  +
Sbjct: 587 DLEDSSISKLPDCLVTMFNLKYLNLSKTQVKELPKNFHKLVNLETLNTKHSKIEELPLGM 646

Query: 589 VRLHNLARLLVGNKVQLPDG-------------IGDLQSLQVLSSARLYKPLKLVEDLRR 635
            +L  L  L+   + +  D              I  L+ LQV+         +L+++L  
Sbjct: 647 WKLKKLRYLITFRRNEGHDSNWNYVLGTRVVPKIWQLKDLQVMDCFNAED--ELIKNLGC 704

Query: 636 LTKLRTLEIVL----HGSDTLGAHEMGRYEEALESSLTVLGKHKIQSLEISCCDYLRDKL 691
           +T+L  + +V+    HG D             L  SL  +   +I+ L ++  D      
Sbjct: 705 MTQLTRISLVMVRREHGRD-------------LCDSLNKI--KRIRFLSLTSIDEEEPLE 749

Query: 692 LDLLCCTVPNIQKLVISGNCINRPSQQMLSLVNLAHLDIYFQRIKQEDLSVLGSISTLLY 751
           +D L  T  +I+KL ++G     PS    +L NL +L +   ++++  +  + ++  L++
Sbjct: 750 IDDLIATA-SIEKLFLAGKLERVPS-WFNTLQNLTYLGLRGSQLQENAILSIQTLPRLVW 807

Query: 752 LRL-KLHFVPDERLCISSQQFQSLMEFRFIYYEGGGLRMLFQQEAMAKLRRLQIRFRAEE 810
           L     +  P  R    +Q FQ+L     +  +     ++ +  AM +L++L +R     
Sbjct: 808 LSFYNAYMGPRLRF---AQGFQNLKILEIVQMKHLT-EVVIEDGAMFELQKLYVR----- 858

Query: 811 MESNAGFEF---SFHHLSSLEDLH 831
             +  G E+      +L +L++LH
Sbjct: 859 --ACRGLEYVPRGIENLINLQELH 880
>AT3G46710.1 | chr3:17206489-17209032 REVERSE LENGTH=848
          Length = 847

 Score =  220 bits (560), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 220/827 (26%), Positives = 377/827 (45%), Gaps = 85/827 (10%)

Query: 6   KDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLWSRHQIANQIQELKA 65
           K+W   V +++YD+ED +D +  KL +   ++ + +++   I      + I + I+ LK 
Sbjct: 59  KEWTKLVLDIAYDVEDVLDTYFLKLEKRLHRLGL-MRLTNIISDKKDAYNILDDIKTLKR 117

Query: 66  RVKEESDRRLRYY----FSECNAHVDGTKI-DPRLPALYVEEEKLVGIHGPMEEIIELLM 120
           R  + + R+L  Y    F+E       +++ + R      +EE++VG+    + ++  L+
Sbjct: 118 RTLDVT-RKLEMYGIGNFNEHRVVASTSRVREVRRARSDDQEERVVGLTDDAKVLLTKLL 176

Query: 121 KEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPNIKKILFDM 178
            +DG   K+ ++SI G  GLGKT+LA +++N   +K+ F+   + +VS   N + IL  +
Sbjct: 177 DDDGDN-KIYMISIFGMEGLGKTSLARKLFNSSDVKESFEYRVWTNVSGECNTRDILMRI 235

Query: 179 LKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEH 238
           +  +      + +K              +++L   L   L+ KRY ++VDDIW + A E 
Sbjct: 236 ISSLEETSEGELEKMA------------QQELEVYLHDILQEKRYLVVVDDIWESEALES 283

Query: 239 VRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVY--NIQPLNEQDSKKLFLKRLFHSD 296
           ++ ALP +   SR+I TT    VA+    G    VY  NI+ L  ++S  LF K+ F   
Sbjct: 284 LKRALPCSYQGSRVIITTSIRVVAE----GRDKRVYTHNIRFLTFKESWNLFEKKAFRYI 339

Query: 297 SNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAFSSQGMSD 356
                 L+++   +++KC G P            K    ++W  V +SL     +  +S 
Sbjct: 340 LKVDQELQKIGKEMVQKCGGLPRTTVVLAGLMSRKK--PNEWNDVWSSLRVKDDNIHVSS 397

Query: 357 ILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQVGGSYF 416
           +  LS+ D+ + LK C LYLSVFPEDY++D ++LI   +AEGFI E +  T++ V   Y 
Sbjct: 398 LFDLSFKDMGHELKLCFLYLSVFPEDYEVDVEKLIQLLVAEGFIQEDEEMTMEDVARYYI 457

Query: 417 NELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVVDEQGYKYLGNKIRR 476
            +L+  ++++ +  K  G   + R+HD+V    I  S E NF+ V DE            
Sbjct: 458 EDLVYISLVEVVKRK-KGKLMSFRIHDLVREFTIKKSKELNFVNVYDE------------ 504

Query: 477 LSFQSNSVENDVNVVQKIMDN--------LSQVRSLSFF-----EVPEKIPPFLKFHSLS 523
              Q +S  +   VV  +MD+         +Q+RS  FF     ++       LK   L 
Sbjct: 505 ---QHSSTTSRREVVHHLMDDNYLCDRRVNTQMRSFLFFGKRRNDITYVETITLKLKLLR 561

Query: 524 VLVLVDYDF-CLGNGHIK---YLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGS 579
           VL L    F C G         +G    L+YL +    +  LPD   NL +LQTLD  G+
Sbjct: 562 VLNLGGLHFICQGYSPWSLPDVIGGLVHLRYLGIADTVVNNLPDFISNLRFLQTLDASGN 621

Query: 580 GIEKFP--PTVVRLHNLARLLVGNKVQLPDGIGDLQSLQVLSSARLYKPLKLVEDLRRLT 637
             E+      +  L +L    +G  +     IGD  +LQ L S   Y   KL  +L  L 
Sbjct: 622 SFERMTDLSNLTSLRHLTGRFIGELL-----IGDAVNLQTLRSISSYSWSKLKHEL--LI 674

Query: 638 KLRTLEIVLHGSDTLGAHEMGRYEEALESSLTVLGKHKIQSLEISCCDYLRDKLLDLLCC 697
            LR LEI          +E     + ++  L ++   K+++L +   + +   L      
Sbjct: 675 NLRDLEI----------YEFHILNDQIKVPLDLVSLSKLKNLRVLKIEVVSFSLFSEETV 724

Query: 698 TVPNIQKLVISGNCINRPSQQMLSLVNLAHLDIYFQRIKQEDLSVLGSISTLLYLRLKLH 757
               + KL +  +    P    L   +L  L +    ++++ +  L  +  L  L L   
Sbjct: 725 RFELLVKLTLHCDVRRLPRDMDLIFPSLESLTL-VTNLQEDPMPTLQKLQRLENLVLYSC 783

Query: 758 FVPDERLCISSQQFQSLMEFRFIYYEGGGLRMLFQQEAMAKLRRLQI 804
             P  ++ I++Q F  L + + I      L +  ++EAM  L +L +
Sbjct: 784 VYPGAKMFINAQGFGRLRKLKVIIKRLDELEI--EEEAMPCLMKLNL 828
>AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853
          Length = 852

 Score =  201 bits (512), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 196/721 (27%), Positives = 329/721 (45%), Gaps = 74/721 (10%)

Query: 12  VRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLWSR----HQIANQIQELKARV 67
           +REL Y+ ED   L   +L  GDD        A   R+  +R    ++ + ++QE+  R+
Sbjct: 65  LRELVYEAEDI--LVDCQLADGDDGNEQRSSNAWLSRLHPARVPLQYKKSKRLQEINERI 122

Query: 68  KEESDRRLRYYFSECNAHVDGTKIDPRLPALYVEEEKLVGIHGPMEEIIELLMKEDGSGQ 127
            +   +   Y+     ++V       R  +   +  ++VG+ G   +I E L + + S  
Sbjct: 123 TKIKSQVEPYFEFITPSNVGRDNGTDRWSSPVYDHTQVVGLEGDKRKIKEWLFRSNDS-- 180

Query: 128 KLKVVSIVGFGGLGKTTLANQVYN--KIKDQFDCSAFISVSQSPNIKKILFDMLKDVTSR 185
           +L +++ VG GGLGKTT+A +V+N  +I+ +F+   ++SVSQ+   ++I+  +L+++   
Sbjct: 181 QLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRNL--- 237

Query: 186 DNSDDDKQIKVVGVKGDKS--DDERQLIGKLRVFLENKRYFIIVDDIW--SASAWEHVRL 241
                          GD S  DD   L+ K++ +L  KRY I++DD+W  + S W+ +  
Sbjct: 238 ---------------GDASVGDDIGTLLRKIQQYLLGKRYLIVMDDVWDKNLSWWDKIYQ 282

Query: 242 ALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNF-- 299
            LP     S +I TTR+ +VAK          +  + L+  +S  LF    F ++     
Sbjct: 283 GLPRGQGGS-VIVTTRSESVAKRV-QARDDKTHRPELLSPDNSWLLFCNVAFAANDGTCE 340

Query: 300 PTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAF-----SSQGM 354
              LE+V   I+ KC G P            K     +W ++              +  +
Sbjct: 341 RPELEDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEHFQDELRGNTSETDNV 400

Query: 355 SDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQVGGS 414
              L LSY +LP HLK+C+L LS++PED  I + +L+  WI EGF+    G++  + G  
Sbjct: 401 MSSLQLSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATESGED 460

Query: 415 YFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVVDEQGYKYLGNKI 474
            F+ L NR +I+ +D  Y GT   C++HDMV +L+I I+ +++F            G   
Sbjct: 461 CFSGLTNRCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKKDSF--------SNPEGLNC 512

Query: 475 RRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFCL 534
           R L    N  E  + V  K+   +S  ++    ++   +    KF     L ++D    +
Sbjct: 513 RHLGISGNFDEKQIKVNHKLRGVVSTTKTGEVNKLNSDLAK--KFTDCKYLRVLDISKSI 570

Query: 535 GNGHI-KYLGSFFQLKYLRVTS----YGITQLPDQFGNLHYLQTLDIR-GSGIEKFPPTV 588
            +  + + L     L++L   S    + + Q P    +LH LQ LD      +++  P +
Sbjct: 571 FDAPLSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQNLKQLQPCI 630

Query: 589 VRLHNLARLLVGNKVQL---PDGIGDLQSLQVL---SSARLYKPLKLVEDLRRLTKLRTL 642
           V    L  L + N   L   P GIG L  L+VL     AR     KL E ++ LT LR L
Sbjct: 631 VLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGCKLSE-VKNLTNLRKL 689

Query: 643 EIVLHGSDTLGAHEMGRYEEALESSLTVLGKHKIQSLEISCCDYLRDKLLDLLCCTVPNI 702
            + L   D +        EE L+S + +    K+ S+ I+C D   D L+  +    P  
Sbjct: 690 GLSLTRGDQI-------EEEELDSLINL---SKLMSISINCYDSYGDDLITKIDALTPPH 739

Query: 703 Q 703
           Q
Sbjct: 740 Q 740
>AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848
          Length = 847

 Score =  199 bits (505), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 187/659 (28%), Positives = 321/659 (48%), Gaps = 43/659 (6%)

Query: 6   KDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLWSRHQIANQIQELKA 65
           K+W   V +++YDIED +D +  KL         +L++  KI      + I   I+ LK 
Sbjct: 59  KEWTKLVLDIAYDIEDVLDTYFLKLEE-RSLRRGLLRLTNKIGKKRDAYNIVEDIRTLKR 117

Query: 66  RVKEESDRRLRYYFSECNA----HVDGTKIDPRLPALYVEEEKLVGIHGPMEEIIELLMK 121
           R+ + + +R  +     N     ++   ++     A  V++E+LV   G  +++  LL+K
Sbjct: 118 RILDITRKRETFGIGSFNEPRGENITNVRVRQLRRAPPVDQEELV--VGLEDDVKILLVK 175

Query: 122 --EDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPNIKKILFD 177
              D    K  ++SI G GGLGKT LA ++YN   +K +FDC A+  VSQ    + IL  
Sbjct: 176 LLSDNEKDKSYIISIFGMGGLGKTALARKLYNSGDVKRRFDCRAWTYVSQEYKTRDILIR 235

Query: 178 MLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWE 237
           +++ +      + +K      +K  + D+E ++   L   LE K Y ++VDD+W   AWE
Sbjct: 236 IIRSLGIVSAEEMEK------IKMFEEDEELEVY--LYGLLEGKNYMVVVDDVWDPDAWE 287

Query: 238 HVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVY--NIQPLNEQDSKKLFLKRLFHS 295
            ++ ALP +   S++I TTR     ++   G +G+VY   ++ L  ++S  LF ++ F +
Sbjct: 288 SLKRALPCDHRGSKVIITTR----IRAIAEGVEGTVYAHKLRFLTFEESWTLFERKAFSN 343

Query: 296 DSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAF--SSQG 353
                  L+     ++KKC G P            K    ++W +V  SL      +S  
Sbjct: 344 IEKVDEDLQRTGKEMVKKCGGLPLAIVVLSGLLSRKR--TNEWHEVCASLWRRLKDNSIH 401

Query: 354 MSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQVGG 413
           +S +  LS+ ++ + LK C LY SVFPEDY+I  ++LI   +AEGFI E +   ++ V  
Sbjct: 402 ISTVFDLSFKEMRHELKLCFLYFSVFPEDYEIKVEKLIHLLVAEGFIQEDEEMMMEDVAR 461

Query: 414 SYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVVDEQGYKYLGNK 473
            Y +EL++R++++   I+  G   +CR+HD++ +L I  + E NF+ V +E+  ++  + 
Sbjct: 462 CYIDELVDRSLVKAERIER-GKVMSCRIHDLLRDLAIKKAKELNFVNVYNEK--QHSSDI 518

Query: 474 IRR-----LSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLV 528
            RR     L       +  VN   +    + + R   +          L+  ++  L+ V
Sbjct: 519 CRREVVHHLMNDYYLCDRRVNKRMRSFLFIGERRGFGYVNTTNLKLKLLRVLNMEGLLFV 578

Query: 529 DYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTV 588
             +  + N     +G    L+YL +    ++ LP    NL +LQTLD  G+   ++   +
Sbjct: 579 SKN--ISNTLPDVIGELIHLRYLGIADTYVSILPASISNLRFLQTLDASGNDPFQYTTDL 636

Query: 589 VRLHNLARLLVGNKVQLPDGIGDLQSLQVLSSARLYKPLKLVEDLRRLTKLRTLEIVLH 647
            +L +L R ++G  V     IG+  +LQ L S   Y   KL  +L  L  L+ LEI  H
Sbjct: 637 SKLTSL-RHVIGKFVG-ECLIGEGVNLQTLRSISSYSWSKLNHEL--LRNLQDLEIYDH 691
>AT1G50180.1 | chr1:18584235-18587136 FORWARD LENGTH=858
          Length = 857

 Score =  197 bits (500), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 169/608 (27%), Positives = 289/608 (47%), Gaps = 74/608 (12%)

Query: 4   QVKDWRNKVRELSYDIEDCIDLFMHKLNRGDDK--VNIVLKMAKKIRMLWSRHQIANQIQ 61
           +V++W   +RE SYD ED ++ F  K      K    ++ ++A  +    S H + ++I+
Sbjct: 57  RVRNWVAGIREASYDAEDILEAFFLKAESRKQKGMKRVLRRLACILNEAVSLHSVGSEIR 116

Query: 62  ELKARVKEESDRRLRYYFSECNAHVDGTKI-----DPRLPALYVEEEKLVGIHGPMEEII 116
           E+ +R+ + +   L +   E     +G  +     + R    YV E  LVG+   +E+++
Sbjct: 117 EITSRLSKIAASMLDFGIKESMGR-EGLSLSDSLREQRQSFPYVVEHNLVGLEQSLEKLV 175

Query: 117 ELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYN--KIKDQFDCSAFISVSQSPNIKKI 174
             L+     G+KL+V SI G GGLGKTTLA Q+++  K++  FD  A++ VSQ    + +
Sbjct: 176 NDLV---SGGEKLRVTSICGMGGLGKTTLAKQIFHHHKVRRHFDRFAWVYVSQDCRRRHV 232

Query: 175 LFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSAS 234
             D+  +++ +D +      +++ ++      + QL  +L  FL+  +  I++DDIW   
Sbjct: 233 WQDIFLNLSYKDENQ-----RILSLR------DEQLGEELHRFLKRNKCLIVLDDIWGKD 281

Query: 235 AWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFH 294
           AW+ ++   P  +  S II TTRN  VA    +  +G ++  Q L  ++S +L  K    
Sbjct: 282 AWDCLKHVFPHET-GSEIILTTRNKEVALY--ADPRGVLHEPQLLTCEESWELLEKISLS 338

Query: 295 SDSNFPTHL----EEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAFS 350
              N    L    EE+   I+ +C G P            KS T ++W++V  ++ S  S
Sbjct: 339 GRENIEPMLVKKMEEIGKQIVVRCGGLPLAITVLGGLLATKS-TWNEWQRVCENIKSYVS 397

Query: 351 SQG---------MSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFIT 401
           + G         ++D+L LSY  LP H+K C LY + +PEDY++    L+   IAEG + 
Sbjct: 398 NGGSSNGSKNMLVADVLCLSYEYLPPHVKQCFLYFAHYPEDYEVHVGTLVSYCIAEGMVM 457

Query: 402 EVK----GQTLDQVGGSYFNELINRNMIQ--PIDIKYDGTANACRVHDMVLNLIISISSE 455
            VK    G T++ VG  Y  EL+ R+M+     DI        CR+HD++  + +  + +
Sbjct: 458 PVKHTEAGTTVEDVGQDYLEELVKRSMVMVGRRDI-VTSEVMTCRMHDLMREVCLQKAKQ 516

Query: 456 ENFLTVVD----EQGYKYLG---NKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFE 508
           E+F+ V+D    ++   ++    N  RR+S Q +    + ++      +LSQV       
Sbjct: 517 ESFVQVIDSRDQDEAEAFISLSTNTSRRISVQLHGGAEEHHI-----KSLSQV------- 564

Query: 509 VPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQFGNL 568
                  F K   L VL L       G      +G    L+ L V    + +L    GNL
Sbjct: 565 ------SFRKMKLLRVLDLEGAQI-EGGKLPDDVGDLIHLRNLSVRLTNVKELTSSIGNL 617

Query: 569 HYLQTLDI 576
             + TLD+
Sbjct: 618 KLMITLDL 625
>AT3G46530.1 | chr3:17130739-17133246 REVERSE LENGTH=836
          Length = 835

 Score =  196 bits (499), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 174/633 (27%), Positives = 289/633 (45%), Gaps = 76/633 (12%)

Query: 6   KDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLWSRHQIANQIQELKA 65
           K+W   V + +YD+ED +D +  KL     +  +  ++  KI      + I + I+ LK 
Sbjct: 59  KEWSKLVLDFAYDVEDVLDTYHLKLEERSQRRGL-RRLTNKIGRKMDAYSIVDDIRILKR 117

Query: 66  RVKEESDRRLRYYFS-----ECNAHVDGTKIDPRLPALYV-EEEKLVGIHGPMEEIIELL 119
           R+ + + +R  Y        +   +    ++     A  V +EE +VG+    + ++E L
Sbjct: 118 RILDITRKRETYGIGGLKEPQGGGNTSSLRVRQLRRARSVDQEEVVVGLEDDAKILLEKL 177

Query: 120 MKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPNIKKILFD 177
           +  D   +   ++SI G GGLGKT LA ++YN   +K++F+  A+  VSQ      IL  
Sbjct: 178 L--DYEEKNRFIISIFGMGGLGKTALARKLYNSRDVKERFEYRAWTYVSQEYKTGDILMR 235

Query: 178 MLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWE 237
           +++ +      + +K  K           E +L   L   LE K+Y ++VDDIW   AW+
Sbjct: 236 IIRSLGMTSGEELEKIRKFA---------EEELEVYLYGLLEGKKYLVVVDDIWEREAWD 286

Query: 238 HVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVY--NIQPLNEQDSKKLFLKRLFHS 295
            ++ ALP N   SR+I TTR     K+   G  G  Y   ++ L  ++S +LF +R F +
Sbjct: 287 SLKRALPCNHEGSRVIITTR----IKAVAEGVDGRFYAHKLRFLTFEESWELFEQRAFRN 342

Query: 296 DSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAFSSQGM- 354
                  L +    +++KC G P            K  T  +W  V NSL        + 
Sbjct: 343 IQRKDEDLLKTGKEMVQKCRGLPLCIVVLAGLLSRK--TPSEWNDVCNSLWRRLKDDSIH 400

Query: 355 --SDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQVG 412
               +  LS+ +L +  K C LYLS+FPEDY+ID ++LI   +AEGFI   +   ++ V 
Sbjct: 401 VAPIVFDLSFKELRHESKLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDEEMMMEDVA 460

Query: 413 GSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVVDEQGYKYLGN 472
             Y  ELI+R++++ +  +  G   +CR+HD++ ++ I  S E NF+ V ++   ++   
Sbjct: 461 RYYIEELIDRSLLEAVR-RERGKVMSCRIHDLLRDVAIKKSKELNFVNVYNDHVAQHSST 519

Query: 473 KIRRL----SFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLV 528
             RR      F+  S E   N                     +++  FL F     LV +
Sbjct: 520 TCRREVVHHQFKRYSSEKRKN---------------------KRMRSFLYFGEFDHLVGL 558

Query: 529 DYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQF-GNLHYLQTLDIRGSGIEKF--P 585
           D++                LK LRV  +G   LP +  G+L +L+ L I G+ I  F   
Sbjct: 559 DFE---------------TLKLLRVLDFGSLWLPFKINGDLIHLRYLGIDGNSINDFDIA 603

Query: 586 PTVVRLHNLARLLVGNKVQLPDGIGDLQSLQVL 618
             + +L  L  L V +   + + I DL+ L  L
Sbjct: 604 AIISKLRFLQTLFVSDNYFIEETI-DLRKLTSL 635
>AT1G53350.1 | chr1:19903899-19907515 FORWARD LENGTH=928
          Length = 927

 Score =  187 bits (476), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 212/836 (25%), Positives = 355/836 (42%), Gaps = 124/836 (14%)

Query: 4   QVKDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLW----SRHQIANQ 59
           +V+++   V+++ YD +D I+ F+    RG +K      + K++R L      R + A+ 
Sbjct: 57  RVRNFLEDVKDIVYDADDIIESFLLNELRGKEK-----GIKKQVRTLACFLVDRRKFASD 111

Query: 60  IQELKARVKE------------------------ESDRRLRYYFSECNAHVDGTKIDPRL 95
           I+ +  R+ E                        E  R +R  FS  +            
Sbjct: 112 IEGITKRISEVIVGMQSLGIQHIADGGGRSLSLQERQREIRQTFSRNS------------ 159

Query: 96  PALYVEEEKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--I 153
                 E  LVG+   +EE+++ L++ D     ++VVS+ G GG+GKTTLA QV++   +
Sbjct: 160 ------ESDLVGLDQSVEELVDHLVENDS----VQVVSVSGMGGIGKTTLARQVFHHDIV 209

Query: 154 KDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGK 213
           +  FD  +++ VSQ    K +   +L+D+   D             +G    DE  L G+
Sbjct: 210 RRHFDGFSWVCVSQQFTRKDVWQRILQDLRPYD-------------EGIIQMDEYTLQGE 256

Query: 214 LRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNV---AKSCCSGFQ 270
           L   LE+ RY +++DD+W    W+ ++   P      +++ T+RN  +   A   C  F+
Sbjct: 257 LFELLESGRYLLVLDDVWKEEDWDRIKAVFPHKR-GWKMLLTSRNEGLGLHADPTCFAFR 315

Query: 271 GSVYNIQPLNEQDSKKLFLKRLFHS---DSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXX 327
             +     L  + S KLF +R+  S    + F    E +   ++  C G P         
Sbjct: 316 PRI-----LTPEQSWKLF-ERIVSSRRDKTEFKVD-EAMGKEMVTYCGGLPLAVKVLGGL 368

Query: 328 XXXKSDTKDQWEQVH-NSLSSAFSSQGMSD--------ILLLSYYDLPYHLKTCLLYLSV 378
              K  T  +W++VH N ++      G+SD        +L LSY DLP  LK C  YL+ 
Sbjct: 369 LA-KKHTVLEWKRVHSNIVTHIVGKSGLSDDNSNSVYRVLSLSYEDLPMQLKHCFFYLAH 427

Query: 379 FPEDYKIDRDELIWRWIAEGFITEVK-GQTLDQVGGSYFNELINRNMIQPIDIKYDGTAN 437
           FPEDYKID   L   W+AEG IT    G T+   G SY  EL+ RNM+   +        
Sbjct: 428 FPEDYKIDVKILFNYWVAEGIITPFHDGSTIQDTGESYLEELVRRNMVVVEESYLTSRIE 487

Query: 438 ACRVHDMVLNLIISISSEENFLTVVDEQGYKYLG------NKIRRLSFQSNSVENDVNVV 491
            C++HDM+  + +S + EENF+ VV                + RRL   S    N ++++
Sbjct: 488 YCQMHDMMREVCLSKAKEENFIRVVKVPTTTSTTINAQSPCRSRRLVLHSG---NALHML 544

Query: 492 QKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFCL--GNGHIKYLGSFFQLK 549
               DN  + RS+  F V EK      F  L +L ++D  +    G      +G    L+
Sbjct: 545 GH-KDN-KKARSVLIFGVEEKFWKPRGFQCLPLLRVLDLSYVQFEGGKLPSSIGDLIHLR 602

Query: 550 YLRVTSYGITQLPDQ--FGNLHYLQTLDIRGSGIEKFPPTVVRLHNLA--RLLVGNKVQL 605
           +L +   G++ LP       L     L +    +   P  +  +  L   RL      + 
Sbjct: 603 FLSLYEAGVSHLPSSLGNLKLLLCLNLGVADRLLVHVPNVLKEMQELRYLRLPRSMPAKT 662

Query: 606 PDGIGDLQSLQVLSSARLYKPLKLVEDLRRLTKLRTLEIVLHGSDTLGAHEMGRYEEALE 665
              +GDL +L+ L++         V DL R+TKL  L ++  G  T     +   E    
Sbjct: 663 KLELGDLVNLESLTN--FSTKHGSVTDLLRMTKLSVLNVIFSGECTFETLLLSLRE---L 717

Query: 666 SSLTVLGKHKIQSLEISCCDYLRDKLLDLLCCTVPNIQKLVISGNCINRPSQQMLSLVNL 725
            +L  L  H  Q + ++      +   +LL     +++ L +S +    P Q      +L
Sbjct: 718 RNLETLSFHDFQKVSVA------NHGGELLVLDFIHLKDLTLSMHLPRFPDQYRFP-PHL 770

Query: 726 AHLDIYFQRIKQEDLSVLGSISTLLYLRLKLHFVPDERLCISSQQFQSLMEFRFIY 781
           AH+ +   R++++ + +L  +  L  + L        R+  S   F  L+  +  Y
Sbjct: 771 AHIWLIGCRMEEDPMPILEKLLHLKSVYLSSGAFLGRRMVCSKGGFPQLLALKMSY 826
>AT1G58390.1 | chr1:21690962-21693891 REVERSE LENGTH=908
          Length = 907

 Score =  184 bits (466), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 210/788 (26%), Positives = 355/788 (45%), Gaps = 138/788 (17%)

Query: 5   VKDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLWSRHQIANQIQELK 64
           V++   +++E+ YD ED I+ ++ K  +      I +++ +   ++  R + A  +  ++
Sbjct: 58  VRNVVEEIKEIVYDAEDIIETYLLK-EKLWKTSGIKMRIRRHACIISDRRRNALDVGGIR 116

Query: 65  ARVKEESDRRLRYYFSECNAHVDGTKIDPR------LPALYVE--EEKLVGIHGPMEEII 116
            R+ +    R    F    A VDG  + P+      +   + +  E   VG+   +++++
Sbjct: 117 TRISDVI--RDMQSFGVQQAIVDGGYMQPQGDRQREMRQTFSKDYESDFVGLEVNVKKLV 174

Query: 117 ELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPNIKKI 174
             L+ E    + ++VVSI G GGLGKTTLA QV+N   +K QFD  A++ VSQ    K +
Sbjct: 175 GYLVDE----ENVQVVSITGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCVSQEFTRKNV 230

Query: 175 LFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSAS 234
              +L+++TSR+  D+  Q+           +E +L  KL   LE  +  I+ DDIW   
Sbjct: 231 WQMILQNLTSREKKDEILQM-----------EEAELHDKLFQLLETSKSLIVFDDIWKDE 279

Query: 235 AWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSV--YNIQP--LNEQDSKKLFLK 290
            W+ ++   P N    +++ T++N +VA       +G +   N +P  L  +DS  LF +
Sbjct: 280 DWDLIKPIFPPNK-GWKVLLTSQNESVA------VRGDIKYLNFKPECLAIEDSWTLFQR 332

Query: 291 RLF----HSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLS 346
             F     S+S     +E++   ++K C G P            K    D WE++  ++ 
Sbjct: 333 IAFPKKDASESKVDEEMEDMGKQMLKHCGGLPLAIKVLGGLLAAKYTMHD-WERLSVNIG 391

Query: 347 SAFSSQGMSD------ILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFI 400
           S    +  S+      +L +S+ +LP +LK C LYL+ FPED+KI+ ++L + W AEG  
Sbjct: 392 SDIVGRTSSNNSSIYHVLSMSFEELPSYLKHCFLYLAHFPEDHKINVEKLSYCWAAEGIS 451

Query: 401 TEV---KGQTLDQVGGSYFNELINRNMIQPIDIKYDGTAN---ACRVHDMVLNLIISISS 454
           T      G+T+  VG SY  EL+ RNMI     + D TA+    C +HDM+  + +  + 
Sbjct: 452 TAEDYHNGETIQDVGQSYLEELVRRNMII---WERDATASRFGTCHLHDMMREVCLFKAK 508

Query: 455 EENFLTVV--------DEQGYKYLGNKIRRLSFQSNS---VENDVNVVQKIMDNLSQVRS 503
           EENFL +            G      + RRL +Q  +   VE D+N          ++RS
Sbjct: 509 EENFLQIAVKSVGVTSSSTGNSQSPCRSRRLVYQCPTTLHVERDINN--------PKLRS 560

Query: 504 LSFFEVPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLG-SFFQLKYLRV-----TSYG 557
                                LV++ +D  + N   K LG SF +LK LRV       + 
Sbjct: 561 ---------------------LVVLWHDLWVENW--KLLGTSFTRLKLLRVLDLFYVDFE 597

Query: 558 ITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLVGNK------VQLPDGIGD 611
             +LP   GNL +L+ L ++ + +   P +   L NL  L+  N       + +PD    
Sbjct: 598 GMKLPFGIGNLIHLRYLSLQDAKVSHLPSS---LGNLMLLIYLNLDVDTEFIFVPDVFMR 654

Query: 612 LQSLQVLS-SARLYKPLKLVEDLRRLTKLRTLEIVLHGSDTLGAHEMGRYEEALESSLTV 670
           +  L+ L     ++K  +L   LR L KL TL                 +     SS  +
Sbjct: 655 MHELRYLKLPLHMHKKTRL--SLRNLVKLETLVY---------------FSTWHSSSKDL 697

Query: 671 LGKHKIQSLEISCCDYLRDKLLDLLCCTVPNIQKLVISGNCINRPSQQ--MLSLVNLAH- 727
            G  ++ +L I        + L      + N++ L I G    +  ++  +L  ++L H 
Sbjct: 698 CGMTRLMTLAIRLTRVTSTETLSASISGLRNLEYLYIVGTHSKKMREEGIVLDFIHLKHL 757

Query: 728 -LDIYFQR 734
            LD+Y  R
Sbjct: 758 LLDLYMPR 765
>AT5G43470.1 | chr5:17463130-17466658 REVERSE LENGTH=909
          Length = 908

 Score =  183 bits (465), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 216/820 (26%), Positives = 362/820 (44%), Gaps = 104/820 (12%)

Query: 4   QVKDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIR-MLWSRHQIANQIQE 62
           +V+++   V++L +D ED I+ ++  LN+   K   V K  +++   L  RH++A+ I+ 
Sbjct: 57  RVRNFLEDVKDLVFDAEDIIESYV--LNKLSGKGKGVKKHVRRLACFLTDRHKVASDIEG 114

Query: 63  LKARVKEESDRRLRYYFSECNAHVDG---------TKIDPRLPALYVE--EEKLVGIHGP 111
           +  R+ E       +   +    +DG          ++   +   Y +  E  LVG+   
Sbjct: 115 ITKRISEVIGEMQSFGIQQI---IDGGRSLSLQERQRVQREIRQTYPDSSESDLVGVEQS 171

Query: 112 MEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSP 169
           ++E++  L++ D      +VVSI G GG+GKTTLA QV++   ++  FD  A++ VSQ  
Sbjct: 172 VKELVGHLVENDVH----QVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQQF 227

Query: 170 NIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDD 229
             K +   +L+++   D   D  Q+           DE  L  KL   LE  RY +++DD
Sbjct: 228 TQKHVWQRILQELQPHDG--DILQM-----------DEYALQRKLFQLLEAGRYLVVLDD 274

Query: 230 IWSASAWEHVRLALPENSLCSRIITTTRNVNV---AKSCCSGFQGSVYNIQPLNEQDSKK 286
           +W    W+ ++   P      +++ T+RN  V   A   C  F+ S+     LN ++S K
Sbjct: 275 VWKKEDWDVIKAVFPRKR-GWKMLLTSRNEGVGIHADPTCLTFRASI-----LNPEESWK 328

Query: 287 LFLKRLF----HSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVH 342
           L  + +F     ++      +E +   ++  C G P            K  T  +W++V 
Sbjct: 329 LCERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKH-TVPEWKRVF 387

Query: 343 NSLSSAFSSQGMSD---------ILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWR 393
           +++ S        D         IL LSY DLP HLK C L L+ FPED +I    L + 
Sbjct: 388 DNIGSQIVGGSWLDDNSLNSVYRILSLSYEDLPTHLKHCFLNLAHFPEDSEISTYSLFYY 447

Query: 394 WIAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISIS 453
           W AEG      G T++  G  Y  EL+ RN++   D      +  C++HDM+  + +S +
Sbjct: 448 WAAEGI---YDGSTIEDSGEYYLEELVRRNLVIADDNYLSWQSKYCQMHDMMREVCLSKA 504

Query: 454 SEENFLTVVDEQGYKYLGN-----KIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSF-- 506
            EENFL ++ +       N     + RRLS  S    + +        N ++VRSL    
Sbjct: 505 KEENFLQIIIDPTCTSTINAQSPSRSRRLSIHSGKAFHILG-----HKNKTKVRSLIVPR 559

Query: 507 FEVPEKIPPFLKFHSLSVLVLVDYDFCL--GNGHIKYLGSFFQLKYLRVTSYGITQLPDQ 564
           FE    I     FH+L++L ++D  +    G      +G    L+YL +    ++ LP  
Sbjct: 560 FEEDYWIRSASVFHNLTLLRVLDLSWVKFEGGKLPCSIGGLIHLRYLSLYEAKVSHLPST 619

Query: 565 FGNLHYLQTLDIRGSGIEKFP-PTVVRLHNLARLL-----VGNKVQLPDGIGDLQSLQVL 618
             NL  L  L++R    E    P V++     R L     + +K +L   +GDL +L+ L
Sbjct: 620 MRNLKLLLYLNLRVDTEEPIHVPNVLKEMIQLRYLSLPLKMDDKTKLE--LGDLVNLEYL 677

Query: 619 SSARLYKPLKLVEDLRRLTKLRTLEIVLHGSDTLGAHEMGRYEEALESSLTVLGKHK--- 675
                      V DL R+TKLR L + L               E L SSL  L   +   
Sbjct: 678 YG--FSTQHSSVTDLLRMTKLRYLAVSLSERCNF---------ETLSSSLRELRNLETLN 726

Query: 676 -IQSLEISCCDYLRDKLLDLLCCTVPNIQKLVISGNCINRPSQQMLSLVNLAHLDIYFQR 734
            + SLE    DY+ + +LD       ++++L ++      P Q      +L HL + +  
Sbjct: 727 FLFSLETYMVDYMGEFVLDHFI----HLKQLGLAVRMSKIPDQHQFP-PHLVHLFLIYCG 781

Query: 735 IKQEDLSVLGSISTLLYLRLKLHFVPDERLCISSQQFQSL 774
           ++++ + +L  +  L  +RL        R+  S   F  L
Sbjct: 782 MEEDPMPILEKLLHLKSVRLARKAFLGSRMVCSKGGFPQL 821
>AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902
          Length = 901

 Score =  183 bits (464), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 204/812 (25%), Positives = 355/812 (43%), Gaps = 97/812 (11%)

Query: 4   QVKDWRNKVRELSYDIEDCIDLFMHKLNRGDDK--VNIVLKMAKKIRMLWSRHQIANQIQ 61
           +V+++   V++L +D ED I+ ++    RG+ K   N V ++A     L  RH++A+ I+
Sbjct: 57  RVRNFLEDVKDLVFDAEDIIESYVLNKLRGEGKGVKNHVRRLAC---FLTDRHKVASDIE 113

Query: 62  ELKARVK----EESDRRLRYYFSECNAHVDGTKIDPRLPALY--VEEEKLVGIHGPMEEI 115
            +  R+     E     ++    +    +    I   +   +    E  LVG+   +EE+
Sbjct: 114 GITKRISKVIGEMQSLGIQQQIIDGGRSLSLQDIQREIRQTFPNSSESDLVGVEQSVEEL 173

Query: 116 IELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPNIKK 173
           +  +++ D     ++VVSI G GG+GKTTLA Q+++   ++  FD  A++ VSQ    K 
Sbjct: 174 VGPMVEIDN----IQVVSISGMGGIGKTTLARQIFHHDLVRRHFDGFAWVCVSQQFTQKH 229

Query: 174 ILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSA 233
           +   +L+++   D        +++ +      DE  + GKL   LE  RY +++DD+W  
Sbjct: 230 VWQRILQELRPHDG-------EILQM------DEYTIQGKLFQLLETGRYLVVLDDVWKE 276

Query: 234 SAWEHVRLALPENSLCSRIITTTRNVNV---AKSCCSGFQGSVYNIQPLNEQDSKKLFLK 290
             W+ ++   P      +++ T+RN  V   A   C  F+  +     LN ++S KLF +
Sbjct: 277 EDWDRIKEVFPRKR-GWKMLLTSRNEGVGLHADPTCLSFRARI-----LNPKESWKLFER 330

Query: 291 RLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAFS 350
            +   +      +E +   ++  C G P            K  T  +W++V  ++ +   
Sbjct: 331 IVPRRNETEYEEMEAIGKEMVTYCGGLPLAVKVLGGLLANKH-TASEWKRVSENIGAQIV 389

Query: 351 SQGMSD---------ILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFIT 401
            +   D         IL LSY DLP  LK C LYL+ FPEDYKI    L   W AEG   
Sbjct: 390 GKSCLDDNSLNSVYRILSLSYEDLPTDLKHCFLYLAHFPEDYKIKTRTLYSYWAAEGI-- 447

Query: 402 EVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTV 461
              G T+   G  Y  EL+ RN++             C++HDM+  + IS +  ENFL +
Sbjct: 448 -YDGLTILDSGEDYLEELVRRNLVIAEKSNLSWRLKLCQMHDMMREVCISKAKVENFLQI 506

Query: 462 VDEQGYKYL-----GNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEK--IP 514
           +              ++ RRL+  S    +       I+ +  +VRSL    + E   I 
Sbjct: 507 IKVPTSTSTIIAQSPSRSRRLTVHSGKAFH-------ILGHKKKVRSLLVLGLKEDLWIQ 559

Query: 515 PFLKFHSLSVLVLVDYDFCL--GNGHIKYLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQ 572
              +F SL +L ++D       G      +G    L++L +    ++ LP    NL  + 
Sbjct: 560 SASRFQSLPLLRVLDLSSVKFEGGKLPSSIGGLIHLRFLSLHQAVVSHLPSTIRNLKLML 619

Query: 573 TLDIRGS-GIEKFPPTVVRLHNLARLL-----VGNKVQLPDGIGDLQSLQVLSSARLYKP 626
            L++  + G+    P V++     R L     + +K +L   +GDL +L+ L        
Sbjct: 620 YLNLHVAIGVPVHVPNVLKEMLELRYLSLPLDMHDKTKLE--LGDLVNLEYLWC--FSTQ 675

Query: 627 LKLVEDLRRLTKLRTLEIVLHGSDTLGAHEMGRYEEALESSLTVLGKHK----IQSLEIS 682
              V DL R+TKLR   +      T          E L SSL    K +    I S +  
Sbjct: 676 HSSVTDLLRMTKLRFFGVSFSERCTF---------ENLSSSLRQFRKLETLSFIYSRKTY 726

Query: 683 CCDYLRDKLLDLLCCTVPNIQKLVISGNCINRPSQQMLSLVNLAHLDIYFQRIKQEDLSV 742
             DY+ + +LD +     +++KL +  +    P Q  L   ++AH+ + F  ++++ + +
Sbjct: 727 MVDYVGEFVLDFI-----HLKKLSLGVHLSKIPDQHQLP-PHIAHIYLLFCHMEEDPMPI 780

Query: 743 LGSISTLLYLRLKLHFVPDERLCISSQQFQSL 774
           L  +  L  + L+       R+  S   F  L
Sbjct: 781 LEKLLHLKSVELRRKAFIGRRMVCSKGGFPQL 812
>AT5G48620.1 | chr5:19717406-19720932 FORWARD LENGTH=909
          Length = 908

 Score =  180 bits (456), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 213/819 (26%), Positives = 361/819 (44%), Gaps = 102/819 (12%)

Query: 4   QVKDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLWSRHQIANQIQEL 63
           +V+++   V++L +D ED I+ ++    RG+ K  +   + +  R L  RH++A+ I+ +
Sbjct: 57  RVRNFLEDVKDLVFDAEDIIESYVLNKLRGEGK-GVKKHVRRLARFLTDRHKVASDIEGI 115

Query: 64  KARVKEESDRRLRYYFSECNAHVDGTK---------IDPRLPALYVE--EEKLVGIHGPM 112
             R+ +       +   +    +DG +         +   +   Y +  E  LVG+   +
Sbjct: 116 TKRISDVIGEMQSFGIQQI---IDGVRSLSLQERQRVQREIRQTYPDSSESDLVGVEQSV 172

Query: 113 EEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPN 170
           EE++  L++ D      +VVSI G GG+GKTTLA QV++   ++  FD  A++ VSQ   
Sbjct: 173 EELVGHLVEND----IYQVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQQFT 228

Query: 171 IKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDI 230
           +K +   +L+++   D +       ++ +      DE  L  KL   LE  RY +++DD+
Sbjct: 229 LKHVWQRILQELQPHDGN-------ILQM------DESALQPKLFQLLETGRYLLVLDDV 275

Query: 231 WSASAWEHVRLALPENSLCSRIITTTRNVNV---AKSCCSGFQGSVYNIQPLNEQDSKKL 287
           W    W+ ++   P      +++ T+RN  V   A   C  F+ S+     LN ++S KL
Sbjct: 276 WKKEDWDRIKAVFPRKR-GWKMLLTSRNEGVGIHADPTCLTFRASI-----LNPEESWKL 329

Query: 288 FLKRLF----HSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHN 343
             + +F     ++      +E +   ++  C G P            K  T  +W++V +
Sbjct: 330 CERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLLANKH-TVPEWKRVSD 388

Query: 344 SLSSAF---------SSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRW 394
           ++ S           S   ++ IL LSY DLP HLK   LYL+ FPED KI   +L   W
Sbjct: 389 NIGSQIVGGSCLDDNSLNSVNRILSLSYEDLPTHLKHRFLYLAHFPEDSKIYTQDLFNYW 448

Query: 395 IAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISS 454
            AEG      G T+   G  Y  EL+ RN++   +       N C++HDM+  + +S + 
Sbjct: 449 AAEGI---YDGSTIQDSGEYYLEELVRRNLVIADNRYLSLEFNFCQMHDMMREVCLSKAK 505

Query: 455 EENFLTVVDEQGYKYLGN-----KIRRLSFQSNSVENDVNVVQKIMDNLSQVRSL--SFF 507
           EENFL ++ +       N     + RR S  S    + +        N  +VRSL  S F
Sbjct: 506 EENFLQIIKDPTSTSTINAQSPSRSRRFSIHSGKAFHILG-----HRNNPKVRSLIVSRF 560

Query: 508 EVPEKIPPFLKFHSLSVLVLVDYDFCL--GNGHIKYLGSFFQLKYLRVTSYGITQLPDQF 565
           E    I     FH+L++L ++D       G      +G    L+YL +    ++ LP   
Sbjct: 561 EEDFWIRSASVFHNLTLLRVLDLSRVKFEGGKLPSSIGGLIHLRYLSLYGAVVSHLPSTM 620

Query: 566 GNLHYLQTLDIRGSGIEKFP-PTVVRLHNLARLL-----VGNKVQLPDGIGDLQSLQVLS 619
            NL  L  L++R    E    P V++     R L     + +K +L   +GDL +L+ L 
Sbjct: 621 RNLKLLLFLNLRVDNKEPIHVPNVLKEMLELRYLSLPQEMDDKTKLE--LGDLVNLEYL- 677

Query: 620 SARLYKPLKLVEDLRRLTKLRTLEIVLHGSDTLGAHEMGRYEEALESSLTVLGKHKIQ-- 677
                     V DL R+TKLR L + L               E L SSL  L   ++   
Sbjct: 678 -WYFSTQHSSVTDLLRMTKLRNLGVSLSERCNF---------ETLSSSLRELRNLEMLNV 727

Query: 678 --SLEISCCDYLRDKLLDLLCCTVPNIQKLVISGNCINRPSQQMLSLVNLAHLDIYFQRI 735
             S EI   D++ + +LD       ++++L ++      P Q      +LAH+ +    +
Sbjct: 728 LFSPEIVMVDHMGEFVLDHFI----HLKQLGLAVRMSKIPDQHQFP-PHLAHIHLVHCVM 782

Query: 736 KQEDLSVLGSISTLLYLRLKLHFVPDERLCISSQQFQSL 774
           K++ + +L  +  L  + L        R+  S   F  L
Sbjct: 783 KEDPMPILEKLLHLKSVALSYGAFIGRRVVCSKGGFPQL 821
>AT3G14470.1 | chr3:4857940-4861104 FORWARD LENGTH=1055
          Length = 1054

 Score =  180 bits (456), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 180/683 (26%), Positives = 325/683 (47%), Gaps = 83/683 (12%)

Query: 5   VKDWRNKVRELSYDIEDCIDLFMH---KLNRGDDKVNIVLKMAKKIRMLWSRHQIANQI- 60
           V+ W N++R++ Y  ED +D       +LN G +  +     + ++R L  R  + + + 
Sbjct: 66  VEKWVNELRDVVYHAEDALDDIATEALRLNIGAESSS-----SNRLRQLRGRMSLGDFLD 120

Query: 61  ---QELKARVKEESDRRLRYYFSECN--AHVDGTKIDP--RLPAL-YVEEEKLVGIHGPM 112
              + L+ R+ E+   RL    S+ N     + T + P  RLP    V+E ++ G     
Sbjct: 121 GNSEHLETRL-EKVTIRLERLASQRNILGLKELTAMIPKQRLPTTSLVDESEVFGRDDDK 179

Query: 113 EEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYN--KIKDQFDCSAFISVSQSPN 170
           +EI+  L+ E+G    + VV+IVG GG+GKTTL+  +YN   ++  F    +  VS+  +
Sbjct: 180 DEIMRFLIPENGKDNGITVVAIVGIGGVGKTTLSQLLYNDQHVRSYFGTKVWAHVSEEFD 239

Query: 171 IKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDI 230
           + KI   + + VTSR     D  +  V +K        +L G    FL      +++DD+
Sbjct: 240 VFKITKKVYESVTSRPCEFTDLDVLQVKLK-------ERLTGTGLPFL------LVLDDL 286

Query: 231 WSA--SAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLF 288
           W+   + W+ +R      +  S+I+ TTR+  VA   C+     V+N+QPL++ D   LF
Sbjct: 287 WNENFADWDLLRQPFIHAAQGSQILVTTRSQRVASIMCAV---HVHNLQPLSDGDCWSLF 343

Query: 289 LKRLF-HSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNS--L 345
           +K +F + +      + +++  I+ KC G P            +     +WE+V +S   
Sbjct: 344 MKTVFGNQEPCLNREIGDLAERIVHKCRGLPLAVKTLGGVLRFEGKVI-EWERVLSSRIW 402

Query: 346 SSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVK- 404
                   +  +L +SYY LP HLK C  Y S+FP+ +  ++D+++  W+AEGF+ + + 
Sbjct: 403 DLPADKSNLLPVLRVSYYYLPAHLKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRS 462

Query: 405 GQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVVDE 464
            + L+++G  YF+EL +R+++Q    +Y        +HD +  L    S E  F +  ++
Sbjct: 463 SKNLEELGNEYFSELESRSLLQKTKTRYI-------MHDFINELAQFASGE--FSSKFED 513

Query: 465 QGYKYLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSV 524
                +  + R LS+  ++    +       + L +V+ L  F     +P  L   S S 
Sbjct: 514 GCKLQVSERTRYLSYLRDNYAEPME-----FEALREVKFLRTF-----LPLSLTNSSRSC 563

Query: 525 LVLVDYDFCLGNG-HIKYLGSFFQLKYLRVTSYGITQL-PDQFGNLHYLQTLDIRGSGIE 582
                   CL      K L +  +L+ L ++ Y I +L PD F N+ + + LD+  + +E
Sbjct: 564 --------CLDQMVSEKLLPTLTRLRVLSLSHYKIARLPPDFFKNISHARFLDLSRTELE 615

Query: 583 KFPPTVVRLHNLARLLV---GNKVQLPDGIGDLQSLQVLSSARLYKPLKLVEDLRRLTKL 639
           K P ++  ++NL  LL+    +  +LP  I +L +L+ L         KL +  RR  +L
Sbjct: 616 KLPKSLCYMYNLQTLLLSYCSSLKELPTDISNLINLRYLD----LIGTKLRQMPRRFGRL 671

Query: 640 RTLEIV----LHGSDTLGAHEMG 658
           ++L+ +    +  SD     E+G
Sbjct: 672 KSLQTLTTFFVSASDGSRISELG 694
>AT1G58410.1 | chr1:21701286-21704255 REVERSE LENGTH=900
          Length = 899

 Score =  179 bits (453), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 183/706 (25%), Positives = 315/706 (44%), Gaps = 122/706 (17%)

Query: 11  KVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLWS----RHQIANQIQELKAR 66
           +++++ YD ED I+ F+ K     +KV +   + K+I+   S    R ++A+ I  +  R
Sbjct: 62  EIKDIVYDTEDIIETFILK-----EKVEMKRGIMKRIKRFASTIMDRRELASDIGGISKR 116

Query: 67  VK-------------------------EESDRRLRYYFSECNAHVDGTKIDPRLPALYVE 101
           +                          +E  R +R+ FS  +                  
Sbjct: 117 ISKVIQDMQSFGVQQIITDGSRSSHPLQERQREMRHTFSRDS------------------ 158

Query: 102 EEKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDC 159
           E   VG+   +++++  L+++D      ++VS+ G GGLGKTTLA QV+N   +KD+FD 
Sbjct: 159 ENDFVGMEANVKKLVGYLVEKDD----YQIVSLTGMGGLGKTTLARQVFNHDVVKDRFDG 214

Query: 160 SAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLE 219
            A++SVSQ      +   +L+++TS++  D+ + +K    + D  DD       L   LE
Sbjct: 215 FAWVSVSQEFTRISVWQTILQNLTSKERKDEIQNMK----EADLHDD-------LFRLLE 263

Query: 220 NKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPL 279
           + +  I++DDIW    W+ ++   P      +++ T+R  ++A    + +    +  + L
Sbjct: 264 SSKTLIVLDDIWKEEDWDLIKPIFPPKK-GWKVLLTSRTESIAMRGDTTYIS--FKPKCL 320

Query: 280 NEQDSKKLF----LKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTK 335
           +  DS  LF    + R   S+      +E +   +IK C G              K    
Sbjct: 321 SIPDSWTLFQSIAMPRKDTSEFKVDEEMENMGKKMIKHCGGLSLAVKVLGGLLAAKYTLH 380

Query: 336 DQWEQVHNSLSS------AFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDE 389
           D W+++  ++ S      + ++  +  +L +S+ +LP +LK C LYL+ FPED++ID ++
Sbjct: 381 D-WKRLSENIGSHIVERTSGNNSSIDHVLSVSFEELPNYLKHCFLYLAHFPEDHEIDVEK 439

Query: 390 LIWRWIAEGFITEVK---GQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVL 446
           L + W AEG I+E +   G+T+   G SY  EL+ RNM+             CR+HDM+ 
Sbjct: 440 LHYYWAAEG-ISERRRYDGETIRDTGDSYIEELVRRNMVISERDVMTSRFETCRLHDMMR 498

Query: 447 NLIISISSEENFLTVVDEQG----YKYLGNKIRRL----------SFQSNSVENDVNVVQ 492
            + +  + EENFL +V         + LG   R +           +++N     + VV 
Sbjct: 499 EICLFKAKEENFLQIVSNHSPTSNPQTLGASRRFVLHNPTTLHVERYKNNPKLRSLVVVY 558

Query: 493 KIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLR 552
             + N   + S S F          +   L VL LV   F  G      +G    L+YL 
Sbjct: 559 DDIGNRRWMLSGSIFT---------RVKLLRVLDLVQAKFK-GGKLPSDIGKLIHLRYLS 608

Query: 553 VTSYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTV------VRLHNLARLLVGNKVQLP 606
           +    ++ LP    NL  L  LDIR    + F P V      +R   L R +   K +L 
Sbjct: 609 LKDAKVSHLPSSLRNLVLLIYLDIRTDFTDIFVPNVFMGMRELRYLELPRFM-HEKTKLE 667

Query: 607 DGIGDLQSLQVLSSARLYKPLKLVEDLRRLTKLRTLEIVLHGSDTL 652
             + +L+ L+ L +         +EDLR + +LRTL I+L    +L
Sbjct: 668 --LSNLEKLEALEN--FSTKSSSLEDLRGMVRLRTLVIILSEGTSL 709
>AT1G59780.1 | chr1:21993581-21997691 REVERSE LENGTH=907
          Length = 906

 Score =  177 bits (448), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 191/727 (26%), Positives = 308/727 (42%), Gaps = 142/727 (19%)

Query: 11  KVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLW----SRHQIANQIQELKAR 66
           +++E++YD ED I++F+             LK +  +R L      R +IA QI  +  R
Sbjct: 69  EIKEITYDAEDIIEIFL-------------LKGSVNMRSLACFPGGRREIALQITSISKR 115

Query: 67  VKE------------------------ESDRRLRYYFSECNAHVDGTKIDPRLPALYVEE 102
           + +                        E  R LR+ FS  +                  E
Sbjct: 116 ISKVIQVMQNLGIKSDIMDGVDSHAQLERKRELRHTFSSES------------------E 157

Query: 103 EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYN--KIKDQFDCS 160
             LVG+   +E+++E L+  D S      VSI G GGLGKTTLA Q+++  K+K  FD  
Sbjct: 158 SNLVGLEKNVEKLVEELVGNDSSHG----VSITGLGGLGKTTLARQIFDHDKVKSHFDGL 213

Query: 161 AFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLEN 220
           A++ VSQ    K +   +L +++ +    D  +           DD ++   KL   LE 
Sbjct: 214 AWVCVSQEFTRKDVWKTILGNLSPKYKDSDLPE-----------DDIQK---KLFQLLET 259

Query: 221 KRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLN 280
           K+  I+ DD+W    W  +    PE     +++ T+RN  +   C +      +  + L 
Sbjct: 260 KKALIVFDDLWKREDWYRIAPMFPERKAGWKVLLTSRNDAIHPHCVT------FKPELLT 313

Query: 281 EQDSKKLFLKRLFHSDSNFPTH-----LEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTK 335
             +  KL  +  F        +     + +++  + K C   P            K  T 
Sbjct: 314 HDECWKLLQRIAFSKQKTITGYIIDKEMVKMAKEMTKHCKRLPLAVKLLGGLLDAKH-TL 372

Query: 336 DQWEQVHNSLSSAFSSQGMSD----------ILLLSYYDLPYHLKTCLLYLSVFPEDYKI 385
            QW+ +  ++ S     G S           +L LS+  LP +LK CLLYL+ +PED++I
Sbjct: 373 RQWKLISENIISHIVVGGTSSNENDSSSVNHVLSLSFEGLPGYLKHCLLYLASYPEDHEI 432

Query: 386 DRDELIWRWIAEG--FITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHD 443
           + + L + W AEG  +    +G T+  V   Y  EL+ RNM+             C++HD
Sbjct: 433 EIERLSYVWAAEGITYPGNYEGATIRDVADLYIEELVKRNMVISERDALTSRFEKCQLHD 492

Query: 444 MVLNLIISISSEENFLTVVDEQG-----YKYLGNKIRRLSFQSNSV---ENDVNVVQKIM 495
           ++  + +  + EENFL +V +       +    ++ RRL   + S+   END       M
Sbjct: 493 LMREICLLKAKEENFLQIVTDPTSSSSVHSLASSRSRRLVVYNTSIFSGEND-------M 545

Query: 496 DNLSQVRSLSFFEVP-EKIPPFLKFHSLSVLVLVDYDFC--LGNGHIKYLGSFFQLKYLR 552
            N S++RSL F  V   +      F  L +L ++D D     G      +G    LKYL 
Sbjct: 546 KN-SKLRSLLFIPVGYSRFSMGSNFIELPLLRVLDLDGAKFKGGKLPSSIGKLIHLKYLS 604

Query: 553 VTSYGITQLPDQFGNLHYLQTLDIR-GSGIEKFPPTVVRLHNLARLLVGNKVQLPDGIGD 611
           +    +T LP    NL  L  L++R  SG     P V +      +L    + LP     
Sbjct: 605 LYQASVTYLPSSLRNLKSLLYLNLRINSGQLINVPNVFK-----EMLELRYLSLPWERSS 659

Query: 612 LQSLQVLSSARLYKPLKL------VEDLRRLTKLRTLEIVLHGSDTLGAHEMGRYEEALE 665
           L  L++ +  +L   +        V DL R+TKLRTL+I++ G         G + E L 
Sbjct: 660 LTKLELGNLLKLETLINFSTKDSSVTDLHRMTKLRTLQILISGE--------GLHMETLS 711

Query: 666 SSLTVLG 672
           S+L++LG
Sbjct: 712 SALSMLG 718
>AT1G58400.1 | chr1:21696165-21699118 REVERSE LENGTH=901
          Length = 900

 Score =  174 bits (440), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 179/685 (26%), Positives = 298/685 (43%), Gaps = 73/685 (10%)

Query: 11  KVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLWSRHQIANQIQELKARVKEE 70
           +++E+ YD E+ I+ F+ K      +  I+ ++ K   +   R + A+ I  +  R+ + 
Sbjct: 64  EIKEIVYDTENMIETFILK-EAARKRSGIIRRITKLTCIKVHRWEFASDIGGISKRISKV 122

Query: 71  SDRRLRYYFSECNAHVDGTKIDPRLPALYVE---------EEKLVGIHGPMEEIIELLMK 121
                 + F       DG++    L     E         E   VG+   +++++  L++
Sbjct: 123 IQDM--HSFGVQQMISDGSQSSHLLQEREREMRQTFSRGYESDFVGLEVNVKKLVGYLVE 180

Query: 122 EDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPNIKKILFDML 179
           ED     +++VS+ G GGLGKTTLA QV+N   +K QFD  A++ VSQ    K +   +L
Sbjct: 181 ED----DIQIVSVTGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCVSQEFTRKNVWQMIL 236

Query: 180 KDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHV 239
           +++TSR+  D+  Q+           +E +L  +L   LE  +  I+ DDIW    W  +
Sbjct: 237 QNLTSRETKDEILQM-----------EEAELHDELFQLLETSKSLIVFDDIWKEEDWGLI 285

Query: 240 RLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNF 299
               P       +    R VN    C +  +  +           +++ + R+  S+   
Sbjct: 286 NPIFPPKKETIAMHGNRRYVNFKPECLTILESWIL---------FQRIAMPRVDESEFKV 336

Query: 300 PTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLS------SAFSSQG 353
              +E +   +IK C G P            K    D W+++  ++       + FS   
Sbjct: 337 DKEMEMMGKQMIKYCGGLPLAVKVLGGLLAAKYTFHD-WKRLSENIGCHIVGRTDFSDGN 395

Query: 354 MSDI---LLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFIT--EVKGQTL 408
            S +   L LS+ +LP +LK C LYL+ FPED+ I  ++L + W AEG +      GQT+
Sbjct: 396 NSSVYHVLSLSFEELPSYLKHCFLYLAHFPEDHNIKVEKLSYCWAAEGILEPRHYHGQTI 455

Query: 409 DQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVVD----E 464
             VG SY  EL+ RNM+            AC +HDM+  + +  + EENF+ +       
Sbjct: 456 RDVGESYIEELVRRNMVIAERDVTTLRFEACHLHDMMREVCLLKAKEENFVQIASILPPT 515

Query: 465 QGYKYLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKI-----PPFLKF 519
              +Y G   R +S    ++      V + ++N      L  +E   K        F++ 
Sbjct: 516 ANSQYPGTSRRFVSQNPTTLH-----VSRDINNPKLQSLLIVWENRRKSWKLLGSSFIRL 570

Query: 520 HSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGS 579
             L VL L    F  G      +G    L+YL +    +++LP   GNL  L  LDI   
Sbjct: 571 ELLRVLDLYKAKF-EGRNLPSGIGKLIHLRYLNLDLARVSRLPSSLGNLRLLIYLDINVC 629

Query: 580 GIEKFPPT-VVRLHNLA--RLLVGNKVQLPDGIGDLQSLQVLSSARLYKPLKLVEDLRRL 636
               F P  ++ +H L   RL      ++  G+ +L +L+ L +         +EDLR +
Sbjct: 630 TKSLFVPNCLMGMHELRYLRLPFNTSKEIKLGLCNLVNLETLENFSTEN--SSLEDLRGM 687

Query: 637 TKLRTLEIVLH---GSDTLGAHEMG 658
             LRTL I L      +TL A  +G
Sbjct: 688 VSLRTLTIGLFKHISKETLFASILG 712
>AT1G59124.1 | chr1:21816832-21819653 FORWARD LENGTH=856
          Length = 855

 Score =  173 bits (438), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 193/710 (27%), Positives = 318/710 (44%), Gaps = 89/710 (12%)

Query: 5   VKDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIR-MLWSRHQIANQIQEL 63
           VK+   +++E+ YD ED I+ F+ + N G  K + + K  +++  ++  R + A  I  L
Sbjct: 58  VKNCVEEIKEIIYDGEDTIETFVLEQNLG--KTSGIKKSIRRLACIIPDRRRYALGIGGL 115

Query: 64  KARVKEESDRRLRYYFSECNAHVDGTKIDP--------RLPALYVEEEKLVGIHGPMEEI 115
             R+ +    R    F    A VDG    P        R      ++   VG+   ++++
Sbjct: 116 SNRISKVI--RDMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKDDDSDFVGLEANVKKL 173

Query: 116 IELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYN--KIKDQFDCSAFISVSQSPNIKK 173
           +  L+ E      ++VVSI G GGLGKTTLA QV+N   +K QFD  +++ VSQ      
Sbjct: 174 VGYLVDE----ANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMN 229

Query: 174 ILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSA 233
           +   +L+D+  ++     ++ K++ +  D       L G+L   LE  +  I++DDIW  
Sbjct: 230 VWQKILRDLKPKE-----EEKKIMEMTQD------TLQGELIRLLETSKSLIVLDDIWEK 278

Query: 234 SAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQP--LNEQDSKKLFLKR 291
             WE ++   P      +++ T+RN +VA    + +     N +P  L  +DS  LF + 
Sbjct: 279 EDWELIKPIFPPTK-GWKVLLTSRNESVAMRRNTSY----INFKPECLTTEDSWTLFQRI 333

Query: 292 LF----HSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSS 347
                  ++       EE+   +IK C G P            K  + D W ++  ++ S
Sbjct: 334 ALPMKDAAEFKIDEEKEELGKLMIKHCGGLPLAIRVLGGMLAEKYTSHD-WRRLSENIGS 392

Query: 348 AF----------SSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAE 397
                       ++   +++L LS+ +LP +LK C LYL+ FPEDY+I  + L + W AE
Sbjct: 393 HLVGGRTNFNDDNNNTCNNVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAE 452

Query: 398 GFIT--EVKGQTLDQVGGSYFNELINRNM-IQPIDIKYDGTANACRVHDMVLNLIISISS 454
           G        G+T+  VG  Y  EL+ RNM I   D+K       C +HDM+  + +  + 
Sbjct: 453 GIFQPRHYDGETIRDVGDVYIEELVRRNMVISERDVK-TSRFETCHLHDMMREVCLLKAK 511

Query: 455 EENFLTVVDEQ-GYKYLGNKI--RRLSFQSNS---VENDVNVVQKIMDNLSQVRSLSFFE 508
           EENFL +   +     L + +  RR  +Q  +   VE D+N          ++R+L    
Sbjct: 512 EENFLQITSSRPSTANLQSTVTSRRFVYQYPTTLHVEKDINN--------PKLRALVVVT 563

Query: 509 VPE---KIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQF 565
           +         F +   L VL L++     G      +G    L+YL +    +T +P   
Sbjct: 564 LGSWNLAGSSFTRLELLRVLDLIEVKIK-GGKLASCIGKLIHLRYLSLEYAEVTHIPYSL 622

Query: 566 GNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLL-----VGNKVQLP-DGIGDLQSLQVLS 619
           GNL  L  L++   G   F P V+      R L     +G K +L    +  L++L+  S
Sbjct: 623 GNLKLLIYLNLASFGRSTFVPNVLMGMQELRYLALPSDMGRKTKLELSNLVKLETLENFS 682

Query: 620 SARLYKPLKLVEDLRRLTKLRTLEIVL---HGSDTLGAHEMG-RYEEALE 665
           +         +EDL  + +L TL I L      +TL A   G +Y E LE
Sbjct: 683 TEN-----SSLEDLCGMVRLSTLNIKLIEETSLETLAASIGGLKYLEKLE 727
>AT1G58807.1 | chr1:21780574-21783793 FORWARD LENGTH=1018
          Length = 1017

 Score =  172 bits (437), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 193/707 (27%), Positives = 317/707 (44%), Gaps = 83/707 (11%)

Query: 5   VKDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIR-MLWSRHQIANQIQEL 63
           VK+   +++E+ YD ED I+ F+ + N G  K + + K  +++  ++  R + A  I  L
Sbjct: 58  VKNCVEEIKEIIYDGEDTIETFVLEQNLG--KTSGIKKSIRRLACIIPDRRRYALGIGGL 115

Query: 64  KARVKEESDRRLRYYFSECNAHVDGTKIDP--------RLPALYVEEEKLVGIHGPMEEI 115
             R+ +    R    F    A VDG    P        R      ++   VG+   ++++
Sbjct: 116 SNRISKVI--RDMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKDDDSDFVGLEANVKKL 173

Query: 116 IELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPNIKK 173
           +  L+ E      ++VVSI G GGLGKTTLA QV+N   +K QFD  +++ VSQ      
Sbjct: 174 VGYLVDE----ANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMN 229

Query: 174 ILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSA 233
           +   +L+D+  ++   ++K+I       + + D  Q  G+L   LE  +  I++DDIW  
Sbjct: 230 VWQKILRDLKPKE---EEKKIM------EMTQDTLQ--GELIRLLETSKSLIVLDDIWEK 278

Query: 234 SAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQP--LNEQDSKKLFLKR 291
             WE ++   P      +++ T+RN +VA    + +     N +P  L  +DS  LF + 
Sbjct: 279 EDWELIKPIFPPTK-GWKVLLTSRNESVAMRRNTSY----INFKPECLTTEDSWTLFQRI 333

Query: 292 LF----HSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSS 347
                  ++       EE+   +IK C G P            K  + D W ++  ++ S
Sbjct: 334 ALPMKDAAEFKIDEEKEELGKLMIKHCGGLPLAIRVLGGMLAEKYTSHD-WRRLSENIGS 392

Query: 348 AF----------SSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAE 397
                       ++   +++L LS+ +LP +LK C LYL+ FPEDY+I  + L + W AE
Sbjct: 393 HLVGGRTNFNDDNNNTCNNVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAE 452

Query: 398 GFIT--EVKGQTLDQVGGSYFNELINRNM-IQPIDIKYDGTANACRVHDMVLNLIISISS 454
           G        G+T+  VG  Y  EL+ RNM I   D+K       C +HDM+  + +  + 
Sbjct: 453 GIFQPRHYDGETIRDVGDVYIEELVRRNMVISERDVK-TSRFETCHLHDMMREVCLLKAK 511

Query: 455 EENFLTVVDEQ-GYKYLGNKI--RRLSFQSNS---VENDVNVVQKIMDNLSQVRSLSFFE 508
           EENFL +   +     L + +  RR  +Q  +   VE D+N        L  +  ++   
Sbjct: 512 EENFLQITSSRPSTANLQSTVTSRRFVYQYPTTLHVEKDIN-----NPKLRALVVVTLGS 566

Query: 509 VPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQFGNL 568
                  F +   L VL L++     G      +G    L+YL +    +T +P   GNL
Sbjct: 567 WNLAGSSFTRLELLRVLDLIEVKIK-GGKLASCIGKLIHLRYLSLEYAEVTHIPYSLGNL 625

Query: 569 HYLQTLDIRGSGIEKFPPTVVRLHNLARLL-----VGNKVQLP-DGIGDLQSLQVLSSAR 622
             L  L++   G   F P V+      R L     +G K +L    +  L++L+  S+  
Sbjct: 626 KLLIYLNLASFGRSTFVPNVLMGMQELRYLALPSDMGRKTKLELSNLVKLETLENFSTEN 685

Query: 623 LYKPLKLVEDLRRLTKLRTLEIVL---HGSDTLGAHEMG-RYEEALE 665
                  +EDL  + +L TL I L      +TL A   G +Y E LE
Sbjct: 686 -----SSLEDLCGMVRLSTLNIKLIEETSLETLAASIGGLKYLEKLE 727
>AT1G59218.1 | chr1:21828398-21831713 FORWARD LENGTH=1050
          Length = 1049

 Score =  170 bits (430), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 197/719 (27%), Positives = 329/719 (45%), Gaps = 87/719 (12%)

Query: 5   VKDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIR-MLWSRHQIANQIQEL 63
           VK+   +++E+ YD ED I+ F+ + N G  K + + K  +++  ++  R + A  I  L
Sbjct: 58  VKNCVEEIKEIIYDGEDTIETFVLEQNLG--KTSGIKKSIRRLACIIPDRRRYALGIGGL 115

Query: 64  KARVKEESDRRLRYYFSECNAHVDGTKIDPR-------LPALYVEEEK-LVGIHGPMEEI 115
             R+ +    R    F    A VDG    P+        P    +++   VG+   ++++
Sbjct: 116 SNRISKVI--RDMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSKDDDSDFVGLEANVKKL 173

Query: 116 IELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPNIKK 173
           +  L+ E      ++VVSI G GGLGKTTLA QV+N   +K QFD  +++ VSQ      
Sbjct: 174 VGYLVDE----ANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMN 229

Query: 174 ILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSA 233
           +   +L+D+  ++     ++ K++ +  D       L G+L   LE  +  I++DDIW  
Sbjct: 230 VWQKILRDLKPKE-----EEKKIMEMTQD------TLQGELIRLLETSKSLIVLDDIWEK 278

Query: 234 SAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQP--LNEQDSKKLFLKR 291
             WE ++   P      +++ T+RN +VA    + +     N +P  L  +DS  LF + 
Sbjct: 279 EDWELIKPIFPPTK-GWKVLLTSRNESVAMRRNTSY----INFKPECLTTEDSWTLFQRI 333

Query: 292 LF----HSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSS 347
                  ++       EE+   +IK C G P            K  + D W ++  ++ S
Sbjct: 334 ALPMKDAAEFKIDEEKEELGKLMIKHCGGLPLAIRVLGGMLAEKYTSHD-WRRLSENIGS 392

Query: 348 AF----------SSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAE 397
                       ++   + +L LS+ +LP +LK C LYL+ FP+DY+I+   L + W AE
Sbjct: 393 HLVGGRTNFNDDNNNTCNYVLSLSFEELPSYLKHCFLYLAHFPDDYEINVKNLSYYWAAE 452

Query: 398 GFIT--EVKGQTLDQVGGSYFNELINRNM-IQPIDIKYDGTANACRVHDMVLNLIISISS 454
           G        G+ +  VG  Y  EL+ RNM I   D+K       C +HDM+  + +  + 
Sbjct: 453 GIFQPRHYDGEIIRDVGDVYIEELVRRNMVISERDVK-TSRFETCHLHDMMREVCLLKAK 511

Query: 455 EENFLTVVDEQGYKYLGNKI-----RRLSFQ---SNSVENDVNVVQKIMDNLSQVRSLSF 506
           EENFL +   +     GN +     RRL +Q   +  VE D+N   K+   +    +  F
Sbjct: 512 EENFLQITSSRTST--GNSLSIVTSRRLVYQYPITLDVEKDIN-DPKLRSLVVVANTYMF 568

Query: 507 FEVPEKIPPFLKFHSLSVLVLVD-YDFCLGNGHI-KYLGSFFQLKYLRVTSYGITQLPDQ 564
           +     +     F  L +L ++D +   L  G +   +G    L+YL +    +T +P  
Sbjct: 569 WGGWSWMLLGSSFIRLELLRVLDIHRAKLKGGKLASSIGQLIHLRYLNLKHAEVTHIPYS 628

Query: 565 FGNLHYLQTLD--IRGSGIEKFPPTVVRLHNLARLL----VGNKVQLP-DGIGDLQSLQV 617
            GNL  L  L+  I  SG    P  +  +  L  L     +G K +L    +  L++L+ 
Sbjct: 629 LGNLKLLIYLNLVILVSGSTLVPNVLKEMQQLRYLALPKDMGRKTKLELSNLVKLETLKN 688

Query: 618 LSSARLYKPLKLVEDLRRLTKLRTLEIVLHGS---DTLGAHEMG-RYEEALESSLTVLG 672
            S+         +EDLR + +LRTL I L      +TL A   G +Y E+L  ++T LG
Sbjct: 689 FSTKNCS-----LEDLRGMVRLRTLTIELRKETSLETLAASIGGLKYLESL--TITDLG 740
>AT1G58848.1 | chr1:21792140-21795455 FORWARD LENGTH=1050
          Length = 1049

 Score =  170 bits (430), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 197/719 (27%), Positives = 329/719 (45%), Gaps = 87/719 (12%)

Query: 5   VKDWRNKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIR-MLWSRHQIANQIQEL 63
           VK+   +++E+ YD ED I+ F+ + N G  K + + K  +++  ++  R + A  I  L
Sbjct: 58  VKNCVEEIKEIIYDGEDTIETFVLEQNLG--KTSGIKKSIRRLACIIPDRRRYALGIGGL 115

Query: 64  KARVKEESDRRLRYYFSECNAHVDGTKIDPR-------LPALYVEEEK-LVGIHGPMEEI 115
             R+ +    R    F    A VDG    P+        P    +++   VG+   ++++
Sbjct: 116 SNRISKVI--RDMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSKDDDSDFVGLEANVKKL 173

Query: 116 IELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPNIKK 173
           +  L+ E      ++VVSI G GGLGKTTLA QV+N   +K QFD  +++ VSQ      
Sbjct: 174 VGYLVDE----ANVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMN 229

Query: 174 ILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSA 233
           +   +L+D+  ++     ++ K++ +  D       L G+L   LE  +  I++DDIW  
Sbjct: 230 VWQKILRDLKPKE-----EEKKIMEMTQD------TLQGELIRLLETSKSLIVLDDIWEK 278

Query: 234 SAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQP--LNEQDSKKLFLKR 291
             WE ++   P      +++ T+RN +VA    + +     N +P  L  +DS  LF + 
Sbjct: 279 EDWELIKPIFPPTK-GWKVLLTSRNESVAMRRNTSY----INFKPECLTTEDSWTLFQRI 333

Query: 292 LF----HSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSS 347
                  ++       EE+   +IK C G P            K  + D W ++  ++ S
Sbjct: 334 ALPMKDAAEFKIDEEKEELGKLMIKHCGGLPLAIRVLGGMLAEKYTSHD-WRRLSENIGS 392

Query: 348 AF----------SSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAE 397
                       ++   + +L LS+ +LP +LK C LYL+ FP+DY+I+   L + W AE
Sbjct: 393 HLVGGRTNFNDDNNNTCNYVLSLSFEELPSYLKHCFLYLAHFPDDYEINVKNLSYYWAAE 452

Query: 398 GFIT--EVKGQTLDQVGGSYFNELINRNM-IQPIDIKYDGTANACRVHDMVLNLIISISS 454
           G        G+ +  VG  Y  EL+ RNM I   D+K       C +HDM+  + +  + 
Sbjct: 453 GIFQPRHYDGEIIRDVGDVYIEELVRRNMVISERDVK-TSRFETCHLHDMMREVCLLKAK 511

Query: 455 EENFLTVVDEQGYKYLGNKI-----RRLSFQ---SNSVENDVNVVQKIMDNLSQVRSLSF 506
           EENFL +   +     GN +     RRL +Q   +  VE D+N   K+   +    +  F
Sbjct: 512 EENFLQITSSRTST--GNSLSIVTSRRLVYQYPITLDVEKDIN-DPKLRSLVVVANTYMF 568

Query: 507 FEVPEKIPPFLKFHSLSVLVLVD-YDFCLGNGHI-KYLGSFFQLKYLRVTSYGITQLPDQ 564
           +     +     F  L +L ++D +   L  G +   +G    L+YL +    +T +P  
Sbjct: 569 WGGWSWMLLGSSFIRLELLRVLDIHRAKLKGGKLASSIGQLIHLRYLNLKHAEVTHIPYS 628

Query: 565 FGNLHYLQTLD--IRGSGIEKFPPTVVRLHNLARLL----VGNKVQLP-DGIGDLQSLQV 617
            GNL  L  L+  I  SG    P  +  +  L  L     +G K +L    +  L++L+ 
Sbjct: 629 LGNLKLLIYLNLVILVSGSTLVPNVLKEMQQLRYLALPKDMGRKTKLELSNLVKLETLKN 688

Query: 618 LSSARLYKPLKLVEDLRRLTKLRTLEIVLHGS---DTLGAHEMG-RYEEALESSLTVLG 672
            S+         +EDLR + +LRTL I L      +TL A   G +Y E+L  ++T LG
Sbjct: 689 FSTKNCS-----LEDLRGMVRLRTLTIELRKETSLETLAASIGGLKYLESL--TITDLG 740
>AT1G59620.1 | chr1:21902627-21905527 FORWARD LENGTH=843
          Length = 842

 Score =  161 bits (408), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 158/591 (26%), Positives = 267/591 (45%), Gaps = 88/591 (14%)

Query: 10  NKVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIR----MLWSRHQIANQIQELKA 65
            +V+E+ YD ED I+ F+ K   G  +      M K+I+    +L  R +IA  ++ L  
Sbjct: 63  KEVKEIVYDTEDIIETFLRKKQLGRTR-----GMKKRIKEFACVLPDRRKIAIDMEGLSK 117

Query: 66  RVKEESDRRLRYYFSECNAHVDGTKIDPRLPALYVEEEKLVGIHGPMEEIIELLMKEDGS 125
           R+                      K+   + +L V++E +  + G + E+      ED S
Sbjct: 118 RI---------------------AKVICDMQSLGVQQENVKKLVGHLVEV------EDSS 150

Query: 126 GQKLKVVSIVGFGGLGKTTLANQVYN--KIKDQFDCSAFISVSQSPNIKKILFDMLKDVT 183
               +VVSI G GG+GKTTLA QV+N   +K  F   A++ VSQ    K +   +L+ V 
Sbjct: 151 ----QVVSITGMGGIGKTTLARQVFNHETVKSHFAQLAWVCVSQQFTRKYVWQTILRKVG 206

Query: 184 SRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLAL 243
                          +K + ++DE Q   KL   L  ++  I++DDIW    W+ +    
Sbjct: 207 PE------------YIKLEMTEDELQ--EKLFRLLGTRKALIVLDDIWREEDWDMIEPIF 252

Query: 244 PENSLCSRIITTTRNVNVA-KSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSN---- 298
           P      +++ T+RN  VA ++  +GF   ++    L  ++S  +F + +F  ++     
Sbjct: 253 PLGK-GWKVLLTSRNEGVALRANPNGF---IFKPDCLTPEESWTIFRRIVFPGENTTEYK 308

Query: 299 FPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSS------AFSSQ 352
               +EE+   +IK C G P               T D+W++++ ++ S      +F+ +
Sbjct: 309 VDEKMEELGKQMIKHCGGLPLALKVLGGLLVVHF-TLDEWKRIYGNIKSHIVGGTSFNDK 367

Query: 353 GMSD---ILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITE--VKGQT 407
            MS    IL LS+ +LP +LK C LYL+ FPED+ ID ++L + W AEG        G T
Sbjct: 368 NMSSVYHILHLSFEELPIYLKHCFLYLAQFPEDFTIDLEKLSYYWAAEGMPRPRYYDGAT 427

Query: 408 LDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVVDEQGY 467
           + +VG  Y  EL+ RNM+             C +HD+V  + +  + EEN +   + +  
Sbjct: 428 IRKVGDGYIEELVKRNMVISERDARTRRFETCHLHDIVREVCLLKAEEENLIETENSKS- 486

Query: 468 KYLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPF-LKFHSLSVLV 526
               +K RRL  +      D   ++  + N  ++RSL F E       F + F  L ++ 
Sbjct: 487 ---PSKPRRLVVKG----GDKTDMEGKLKN-PKLRSLLFIEELGGYRGFEVWFTRLQLMR 538

Query: 527 LVDYDFCLGNGHI-KYLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQTLDI 576
           ++D       G +   +G    L+YL +     + LP    NL  L  L++
Sbjct: 539 VLDLHGVEFGGELPSSIGLLIHLRYLSLYRAKASHLPSSMQNLKMLLYLNL 589
>AT1G58602.1 | chr1:21760167-21763765 FORWARD LENGTH=1139
          Length = 1138

 Score =  160 bits (406), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 188/709 (26%), Positives = 313/709 (44%), Gaps = 93/709 (13%)

Query: 11  KVRELSYDIEDCIDLFMHKLNRGDDKVNIVLKMAKKIRMLWSRHQIANQIQELKARVKEE 70
           +++++ YD ED ++ F+ K     +K+     + K I+ L     I    +E+   +   
Sbjct: 64  EIKDIVYDAEDVLETFVQK-----EKLGTTSGIRKHIKRLTC---IVPDRREIALYIGHV 115

Query: 71  SDRRLRYYFSECNAHVDGTKIDPRLPALYVEEEKL------------VGIHGPMEEIIEL 118
           S R  R      +  V    +D  +  L   E ++            V +   +++++  
Sbjct: 116 SKRITRVIRDMQSFGVQQMIVDDYMHPLRNREREIRRTFPKDNESGFVALEENVKKLVGY 175

Query: 119 LMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDCSAFISVSQSPNIKKILF 176
            ++ED      +VVSI G GGLGKTTLA QV+N   +  +FD  A++SVSQ   +K +  
Sbjct: 176 FVEEDN----YQVVSITGMGGLGKTTLARQVFNHDMVTKKFDKLAWVSVSQDFTLKNVWQ 231

Query: 177 DMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAW 236
           ++L D+  ++    +++ K++ +       E  L  +L   LE  +  I++DDIW    W
Sbjct: 232 NILGDLKPKEEETKEEEKKILEMT------EYTLQRELYQLLEMSKSLIVLDDIWKKEDW 285

Query: 237 EHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQP--LNEQDSKKLFLKRLF- 293
           E ++   P      +++ T+RN ++     + +    +N +P  L   DS KLF +  F 
Sbjct: 286 EVIKPIFPPTK-GWKLLLTSRNESIVAPTNTKY----FNFKPECLKTDDSWKLFQRIAFP 340

Query: 294 ---HSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAF- 349
               S+      +E++   +I+ C G P            K  + D W ++  ++ S   
Sbjct: 341 INDASEFEIDEEMEKLGEKMIEHCGGLPLAIKVLGGMLAEKYTSHD-WRRLSENIGSHLV 399

Query: 350 ---------SSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFI 400
                    ++   + +L LS+ +LP +LK C LYL+ FPEDY+I  + L + W AE   
Sbjct: 400 GGRTNFNDDNNNSCNYVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAEEIF 459

Query: 401 T--EVKGQTLDQVGGSYFNELINRNM-IQPIDIKYDGTANACRVHDMVLNLIISISSEEN 457
                 G+ +  VG  Y  EL+ RNM I   D+K       C +HDM+  + +  + EEN
Sbjct: 460 QPRHYDGEIIRDVGDVYIEELVRRNMVISERDVK-TSRFETCHLHDMMREVCLLKAKEEN 518

Query: 458 FLTVV-DEQGYKYLGNKI--RRLSFQSNS---VENDVNVVQKIMDNLSQVRSLSFFEVPE 511
           FL +  +        + +  RRL +Q  +   VE D+N          ++RSL    +  
Sbjct: 519 FLQITSNPPSTANFQSTVTSRRLVYQYPTTLHVEKDINN--------PKLRSLVVVTLGS 570

Query: 512 ---KIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQFGNL 568
                  F +   L VL LV      G      +G    L+YL +    +T +P   GNL
Sbjct: 571 WNMAGSSFTRLELLRVLDLVQAKLK-GGKLASCIGKLIHLRYLSLEYAEVTHIPYSLGNL 629

Query: 569 HYLQTLD--IRGSGIEKFPPTVV----RLHNLA-RLLVGNKVQLP-DGIGDLQSLQVLSS 620
             L  L+  I  S    F P V+     L  LA   L+  K +L    +  L++L+  S+
Sbjct: 630 KLLIYLNLHISLSSRSNFVPNVLMGMQELRYLALPSLIERKTKLELSNLVKLETLENFST 689

Query: 621 ARLYKPLKLVEDLRRLTKLRTLEIVL---HGSDTLGAHEMG-RYEEALE 665
                    +EDLR + +LRTL I L      +TL A   G +Y E LE
Sbjct: 690 KN-----SSLEDLRGMVRLRTLTIELIEETSLETLAASIGGLKYLEKLE 733
>AT1G10920.1 | chr1:3644587-3647004 REVERSE LENGTH=728
          Length = 727

 Score =  155 bits (391), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 170/598 (28%), Positives = 260/598 (43%), Gaps = 84/598 (14%)

Query: 102 EEKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK--IKDQFDC 159
           E  LVG+   +E +   L++ D     ++VVSI G GG+GKTTLA QV++   ++  FD 
Sbjct: 37  ESDLVGVEQSVEALAGHLVEND----NIQVVSISGMGGIGKTTLARQVFHHDMVQRHFDG 92

Query: 160 SAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSD-DERQLIGKLRVFL 218
            A++ VSQ    K +   + +++  ++              GD S  DE  L GKL   L
Sbjct: 93  FAWVFVSQQFTQKHVWQRIWQELQPQN--------------GDISHMDEHILQGKLFKLL 138

Query: 219 ENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNV---AKSCCSGFQGSVYN 275
           E  RY +++DD+W    W+ ++   P      +++ T+RN  V   A     GF+  +  
Sbjct: 139 ETGRYLVVLDDVWKEEDWDRIKAVFPRKR-GWKMLLTSRNEGVGIHADPKSFGFKTRI-- 195

Query: 276 IQPLNEQDSKKLFLKRLFH--------SDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXX 327
              L  ++S KL  K +FH        S+      +E +   ++  C G P         
Sbjct: 196 ---LTPEESWKLCEKIVFHRRDETGTLSEVRVDEDMEAMGKEMVTCCGGLPLAVKVLGGL 252

Query: 328 XXXKSDTKDQWEQVHNSLSSAFSSQGMSD--------ILLLSYYDLPYHLKTCLLYLSVF 379
              K  T  +W++V++++    + +   D        +L LSY +LP  LK C LYL+ F
Sbjct: 253 LATKH-TVPEWKRVYDNIGPHLAGRSSLDDNLNSIYRVLSLSYENLPMCLKHCFLYLAHF 311

Query: 380 PEDYKIDRDELIWRWIAEGFITEV-KGQTLDQVGGSYFNELINRNMIQPIDIKYDG-TAN 437
           PE Y+I    L     AEG IT    G T+   G  Y  EL  RNMI  ID  Y      
Sbjct: 312 PEYYEIHVKRLFNYLAAEGIITSSDDGTTIQDKGEDYLEELARRNMIT-IDKNYMFLRKK 370

Query: 438 ACRVHDMVLNLIISISSEENFLTVVDEQGYKYLGN-----KIRRLSFQ-SNSVENDVNVV 491
            C++HDM+  + +S + EENFL +          N     K RRLS    N++ +    +
Sbjct: 371 HCQMHDMMREVCLSKAKEENFLEIFKVSTATSAINARSLSKSRRLSVHGGNALPSLGQTI 430

Query: 492 QKIMDNLSQVRSLSFFEVPEKI-------PPFLKFHSLSVLVLVDYDFCLGNGHIKYLGS 544
            K      +VRSL +F   ++        P F     L VL L    F  G      +G 
Sbjct: 431 NK------KVRSLLYFAFEDEFCILESTTPCFRSLPLLRVLDLSRVKF-EGGKLPSSIGD 483

Query: 545 FFQLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLVGNKVQ 604
              L++L +    I+ LP    NL  L  L++  +G+   P  +  +  L  L      Q
Sbjct: 484 LIHLRFLSLHRAWISHLPSSLRNLKLLLYLNLGFNGMVHVPNVLKEMQELRYL------Q 537

Query: 605 LPDGIGDLQSLQVLSSARLYKPLKL------VEDLRRLTKLRTLEIVLH--GSDTLGA 654
           LP  + D   L++     L   +        V DL  +TKLR L + +    SDTL +
Sbjct: 538 LPMSMHDKTKLELSDLVNLESLMNFSTKYASVMDLLHMTKLRELSLFITDGSSDTLSS 595
>AT3G14460.1 | chr3:4851990-4856264 REVERSE LENGTH=1425
          Length = 1424

 Score =  151 bits (382), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 148/561 (26%), Positives = 256/561 (45%), Gaps = 69/561 (12%)

Query: 115 IIELLMKEDG-SGQKLKVVSIVGFGGLGKTTLANQVYN--KIKDQFDCSAFISVSQSPNI 171
           ++ LL+ +D  S  K  V+S+VG  G+GKTTL   V+N  ++ + F+   +IS   + N+
Sbjct: 178 LVNLLLSDDEISIGKPAVISVVGMPGVGKTTLTEIVFNDYRVTEHFEVKMWISAGINFNV 237

Query: 172 KKILFDMLKDVTSRD-NSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDI 230
             +   +L+D+TS   N++D   +++                +L+  L  KR+ +++DD 
Sbjct: 238 FTVTKAVLQDITSSAVNTEDLPSLQI----------------QLKKTLSGKRFLLVLDDF 281

Query: 231 WSAS--AWEHVRLALPENSLCSRIITTTRN---VNVAKSCCSGFQGSVYNIQPLNEQDSK 285
           WS S   WE  ++A  +    S+I+ TTR+     VAK+        +Y ++ +  ++  
Sbjct: 282 WSESDSEWESFQVAFTDAEEGSKIVLTTRSEIVSTVAKA------EKIYQMKLMTNEECW 335

Query: 286 KLFLKRLFHSDS--NFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHN 343
           +L  +  F + S  +    LE +   I ++C G P            K +  D W  V  
Sbjct: 336 ELISRFAFGNISVGSINQELEGIGKRIAEQCKGLPLAARAIASHLRSKPN-PDDWYAVSK 394

Query: 344 SLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEV 403
           + SS  +S  +  +L LSY  LP  LK C    S+FP+ +  DR+EL+  W+A   + + 
Sbjct: 395 NFSSYTNS--ILPVLKLSYDSLPPQLKRCFALCSIFPKGHVFDREELVLLWMAIDLLYQP 452

Query: 404 K-GQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVV 462
           +  + L+ +G  Y  +L+ ++  Q +DI    T  +  +HD++ +L  ++S   +F   +
Sbjct: 453 RSSRRLEDIGNDYLGDLVAQSFFQRLDI----TMTSFVMHDLMNDLAKAVSG--DFCFRL 506

Query: 463 DEQGYKYLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSL 522
           ++     + +  R  SF  +  +  V             RS+   E    I PF    SL
Sbjct: 507 EDDNIPEIPSTTRHFSFSRSQCDASV-----------AFRSICGAEFLRTILPFNSPTSL 555

Query: 523 SVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGSGIE 582
             L L +            L +   L+ L ++ Y IT LP     L  L+ LD+  + I+
Sbjct: 556 ESLQLTEKVLN------PLLNALSGLRILSLSHYQITNLPKSLKGLKLLRYLDLSSTKIK 609

Query: 583 KFPPTVVRLHNLARLLVGN---KVQLPDGIGDLQSLQVLS--SARLYKPLKLVEDLRRLT 637
           + P  V  L NL  LL+ N      LP  I +L +L++L      L +    ++ LR L 
Sbjct: 610 ELPEFVCTLCNLQTLLLSNCRDLTSLPKSIAELINLRLLDLVGTPLVEMPPGIKKLRSLQ 669

Query: 638 KLRTLEI-VLHGSDTLGAHEM 657
           KL    I  L G+   G HE+
Sbjct: 670 KLSNFVIGRLSGA---GLHEL 687
>AT1G63350.1 | chr1:23494935-23497631 REVERSE LENGTH=899
          Length = 898

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 157/589 (26%), Positives = 253/589 (42%), Gaps = 89/589 (15%)

Query: 100 VEEEKL----VGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKD 155
           VEE++L    VG    ++     LM EDG G    ++ + G GG+GKTTL  Q+ NK   
Sbjct: 144 VEEQQLQPTIVGQETMLDNAWNHLM-EDGVG----IMGLYGMGGVGKTTLLTQINNKFSK 198

Query: 156 ---QFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIG 212
               FD   ++ VS+  N++ IL               D+  + V + G+K D + +   
Sbjct: 199 YMCGFDSVIWVVVSKEVNVENIL---------------DEIAQKVHISGEKWDTKYKYQK 243

Query: 213 KLRV--FLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQ 270
            + +  FL   R+ + +DDIW       + +  P      +++ TTR+++V   C S   
Sbjct: 244 GVYLYNFLRKMRFVLFLDDIWEKVNLVEIGVPFPTIKNKCKVVFTTRSLDV---CTSMGV 300

Query: 271 GSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXX 330
                +Q L + D+  LF K++          + E+S  + KKC G P            
Sbjct: 301 EKPMEVQCLADNDAYDLFQKKVGQITLGSDPEIRELSRVVAKKCCGLPLALNVVSETMSC 360

Query: 331 KSDTKDQWEQ---VHNSLSSAFSSQGMSD----ILLLSYYDLPYH-LKTCLLYLSVFPED 382
           K  T  +W     V NS ++ FS  GM D    +L  SY  L    +K CLLY ++FPED
Sbjct: 361 KR-TVQEWRHAIYVLNSYAAKFS--GMDDKILPLLKYSYDSLKGEDVKMCLLYCALFPED 417

Query: 383 YKIDRDELIWRWIAEGFITEVKG-QTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRV 441
            KI ++ LI  WI E  I   +G    +  G      L+  +++   +++ DG AN   +
Sbjct: 418 AKIRKENLIEYWICEEIIDGSEGIDKAENQGYEIIGSLVRASLLME-EVELDG-ANIVCL 475

Query: 442 HDMVLNLIISISSE-----ENFLTVVDEQGYKYL-----GNKIRRLSFQSNSVENDVNVV 491
           HD+V  + + I+S+     E F+ V    G + +      N +RR+S   N++ +    +
Sbjct: 476 HDVVREMALWIASDLGKQNEAFI-VRASVGLREILKVENWNVVRRMSLMKNNIAH----L 530

Query: 492 QKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYL 551
              +D +     L      EKI     F+S+  L ++D     GN               
Sbjct: 531 DGRLDCMELTTLLLQSTHLEKISSEF-FNSMPKLAVLDLS---GN--------------- 571

Query: 552 RVTSYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLVGNKVQLPD--GI 609
               Y +++LP+    L  LQ L++  +GI   P  +  L  L  L +    QL    GI
Sbjct: 572 ----YYLSELPNGISELVSLQYLNLSSTGIRHLPKGLQELKKLIHLYLERTSQLGSMVGI 627

Query: 610 GDLQSLQV--LSSARLYKPLKLVEDLRRLTKLRTLEIVLHGSDTLGAHE 656
             L +L+V  LS +     L  V++L  L  L  L   +    TLG  +
Sbjct: 628 SCLHNLKVLKLSGSSYAWDLDTVKELEALEHLEVLTTTIDDC-TLGTDQ 675
>AT1G12220.1 | chr1:4145011-4147680 FORWARD LENGTH=890
          Length = 889

 Score =  122 bits (307), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 251/562 (44%), Gaps = 64/562 (11%)

Query: 105 LVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK---IKDQFDCSA 161
           +VG    +E+    LM EDGSG    ++ + G GG+GKTTL  ++ NK   I D+FD   
Sbjct: 157 IVGQEIMLEKAWNRLM-EDGSG----ILGLYGMGGVGKTTLLTKINNKFSKIDDRFDVVI 211

Query: 162 FISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENK 221
           ++ VS+S  ++KI              D  +++ + G++  + +D  Q+   +   L  +
Sbjct: 212 WVVVSRSSTVRKI------------QRDIAEKVGLGGMEWSEKNDN-QIAVDIHNVLRRR 258

Query: 222 RYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNE 281
           ++ +++DDIW     + V +  P      ++  TTR+ +V           V  +QP   
Sbjct: 259 KFVLLLDDIWEKVNLKAVGVPYPSKDNGCKVAFTTRSRDVCGRMGVDDPMEVSCLQP--- 315

Query: 282 QDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQV 341
           ++S  LF  ++  +       +  ++  + +KC G P            K    +    +
Sbjct: 316 EESWDLFQMKVGKNTLGSHPDIPGLARKVARKCRGLPLALNVIGEAMACKRTVHEWCHAI 375

Query: 342 HNSLSSAFSSQGMSD----ILLLSYYDLPYHL-KTCLLYLSVFPEDYKIDRDELIWRWIA 396
               SSA    GM D    +L  SY +L   L K+C LY S+FPEDY ID++ L+  WI+
Sbjct: 376 DVLTSSAIDFSGMEDEILHVLKYSYDNLNGELMKSCFLYCSLFPEDYLIDKEGLVDYWIS 435

Query: 397 EGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEE 456
           EGFI E +G+  + +   Y  E+I   +   + ++ +   +  ++HD+V  + + ISS+ 
Sbjct: 436 EGFINEKEGRERN-INQGY--EIIGTLVRACLLLEEERNKSNVKMHDVVREMALWISSD- 491

Query: 457 NFLTVVDEQGYKYLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPF 516
                        LG +  +   ++     +V  V+    + + VR +S      +I   
Sbjct: 492 -------------LGKQKEKCIVRAGVGLREVPKVK----DWNTVRKISLMN--NEIEEI 532

Query: 517 LKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQ-LKYLRV----TSYGITQLPDQFGNLHYL 571
              H  + L  +   F   N  +K    FF+ + +L V     +  + +LP++   L  L
Sbjct: 533 FDSHECAALTTL---FLQKNDVVKISAEFFRCMPHLVVLDLSENQSLNELPEEISELASL 589

Query: 572 QTLDIRGSGIEKFPPTVVRLHNLARLLVGNKVQLPD--GIGDLQSLQVLS--SARLYKPL 627
           +  ++  + I + P  +  L  L  L + +   L    GI +L +L+ L    +RL   +
Sbjct: 590 RYFNLSYTCIHQLPVGLWTLKKLIHLNLEHMSSLGSILGISNLWNLRTLGLRDSRLLLDM 649

Query: 628 KLVEDLRRLTKLRTLEIVLHGS 649
            LV++L+ L  L  + + +  S
Sbjct: 650 SLVKELQLLEHLEVITLDISSS 671
>AT5G05400.1 | chr5:1597745-1600369 REVERSE LENGTH=875
          Length = 874

 Score =  122 bits (306), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 156/646 (24%), Positives = 281/646 (43%), Gaps = 119/646 (18%)

Query: 106 VGIHGPMEEIIELLMKEDGSGQKLKVVS--------------IVGFGGLGKTTLANQVYN 151
           V   GP+ ++ E L  ++  GQ+  V S              I G GG+GKTTL +Q+ N
Sbjct: 138 VAQKGPIPKVEERLFHQEIVGQEAIVESTWNSMMEVGVGLLGIYGMGGVGKTTLLSQINN 197

Query: 152 K---IKDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDER 208
           K   + + FD + ++ VS++P +K+I  D+ K +   +             +G +   E 
Sbjct: 198 KFRTVSNDFDIAIWVVVSKNPTVKRIQEDIGKRLDLYN-------------EGWEQKTEN 244

Query: 209 QLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSG 268
           ++   ++  LENK+Y +++DD+W+     ++ + +P+ +  S+I  T+R+  V   C   
Sbjct: 245 EIASTIKRSLENKKYMLLLDDMWTKVDLANIGIPVPKRN-GSKIAFTSRSNEV---CGKM 300

Query: 269 FQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXX 328
                  +  L   D+  LF + +  +  + P  + EV+ +I +KC+G P          
Sbjct: 301 GVDKEIEVTCLMWDDAWDLFTRNMKETLESHP-KIPEVAKSIARKCNGLPLALNVIGETM 359

Query: 329 XXKSDTKDQWEQVHNSLS--SAFSSQGMSDILLLSYYDLPYH-LKTCLLYLSVFPEDYKI 385
             K       E+ H+++   S   +  +S IL  SY DL     K+C L+ ++FPEDY+I
Sbjct: 360 ARKKSI----EEWHDAVGVFSGIEADILS-ILKFSYDDLKCEKTKSCFLFSALFPEDYEI 414

Query: 386 DRDELIWRWIAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMV 445
            +D+LI  W+ +G I       L   G +Y    I   + +   +K   T    ++HD+V
Sbjct: 415 GKDDLIEYWVGQGII-------LGSKGINYKGYTIIGTLTRAYLLKESETKEKVKMHDVV 467

Query: 446 LNLIISISS------EENFLTVVDEQGYKYLG-----NKIRRLSFQSNSVENDVNV---- 490
             + + ISS      ++N L V      + +        +RR+S   N +E         
Sbjct: 468 REMALWISSGCGDQKQKNVLVVEANAQLRDIPKIEDQKAVRRMSLIYNQIEEACESLHCP 527

Query: 491 -VQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSF---F 546
            ++ ++   +++R +S  E    +P         +L+++D      N ++  L SF   +
Sbjct: 528 KLETLLLRDNRLRKIS-REFLSHVP---------ILMVLDLSL---NPNLIELPSFSPLY 574

Query: 547 QLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLVGNKVQLP 606
            L++L ++  GIT LPD    L  L  L++  + + K      R++              
Sbjct: 575 SLRFLNLSCTGITSLPDGLYALRNLLYLNLEHTYMLK------RIYE------------- 615

Query: 607 DGIGDLQSLQVLSSARLYKPL-----KLVEDLRRLTKLRTLEIVLHGSDT----LGAHEM 657
             I DL +L+VL   +LY        KLV  ++ +  L  L I L  S      LG    
Sbjct: 616 --IHDLPNLEVL---KLYASGIDITDKLVRQIQAMKHLYLLTITLRNSSGLEIFLGDTRF 670

Query: 658 GRYEEALESSLTVLGKHKIQSLEISCCDYLRDKLLDLLCCTVPNIQ 703
             Y E     LT+  +   QSL++        + L++    +P I+
Sbjct: 671 SSYTEG----LTLDEQSYYQSLKVPLATISSSRFLEIQDSHIPKIE 712
>AT5G47250.1 | chr5:19186045-19188576 REVERSE LENGTH=844
          Length = 843

 Score =  119 bits (299), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 155/614 (25%), Positives = 268/614 (43%), Gaps = 87/614 (14%)

Query: 103 EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK---IKDQFDC 159
           ++ VG+   +E+  E L K++      +++ I G GG+GKTTL   + NK   + D +D 
Sbjct: 155 QQTVGLDTTLEKTWESLRKDEN-----RMLGIFGMGGVGKTTLLTLINNKFVEVSDDYDV 209

Query: 160 SAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLE 219
             ++  S+  ++ KI   + + +   DN+           +G K+ +  +++  ++    
Sbjct: 210 VIWVESSKDADVGKIQDAIGERLHICDNNWSTYS------RGKKASEISRVLRDMK---- 259

Query: 220 NKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSV-YNIQP 278
             R+ +++DD+W   +   +   +P      +++ TTR    +K  CS  + +    +Q 
Sbjct: 260 -PRFVLLLDDLWEDVSLTAI--GIPVLGKKYKVVFTTR----SKDVCSVMRANEDIEVQC 312

Query: 279 LNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQW 338
           L+E D+  LF  ++ H D      + +++  I+ KC G P            KS T  QW
Sbjct: 313 LSENDAWDLFDMKV-HCDG--LNEISDIAKKIVAKCCGLPLALEVIRKTMASKS-TVIQW 368

Query: 339 EQVHNSLSSAFSS-----QGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWR 393
            +  ++L S  S      +G+  +L LSY  L      C LY ++FP+ Y I +DEL+  
Sbjct: 369 RRALDTLESYRSEMKGTEKGIFQVLKLSYDYLKTKNAKCFLYCALFPKAYYIKQDELVEY 428

Query: 394 WIAEGFITEVKG-QTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISI 452
           WI EGFI E  G +     G    + L+   ++   + K         +HDM+ ++ + I
Sbjct: 429 WIGEGFIDEKDGRERAKDRGYEIIDNLVGAGLLLESNKKV-------YMHDMIRDMALWI 481

Query: 453 SSEENFLTVVDEQGYKYLGNKIRRLSFQSNSVENDVNVVQ-KIMDNLSQVRSLSFFEVPE 511
            SE          G +Y+             V+ D  + Q   + + + V  +S F    
Sbjct: 482 VSEF-------RDGERYV-------------VKTDAGLSQLPDVTDWTTVTKMSLFNNEI 521

Query: 512 K-IPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVT-----SYGITQLPDQF 565
           K IP   +F   + LV +   F   N  +  +G FF +    V      ++ IT+LP   
Sbjct: 522 KNIPDDPEFPDQTNLVTL---FLQNNRLVDIVGKFFLVMSTLVVLDLSWNFQITELPKGI 578

Query: 566 GNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLVGNKVQLPDG--IGDLQSLQVL----S 619
             L  L+ L++ G+ I+  P  +  L  L  L + +   L     I +LQ LQVL    S
Sbjct: 579 SALVSLRLLNLSGTSIKHLPEGLGVLSKLIHLNLESTSNLRSVGLISELQKLQVLRFYGS 638

Query: 620 SAR----LYKPLKLVEDLRRLTKLRTLEIVLH---GSDTLGAHEMGRYEEALESSLTVLG 672
           +A     L K L+ ++ L+ LT     + VL    GS  L     G Y E L+ S   +G
Sbjct: 639 AAALDCCLLKILEQLKGLQLLTVTVNNDSVLEEFLGSTRLAGMTQGIYLEGLKVSFAAIG 698

Query: 673 K-HKIQSLEISCCD 685
               +  LE+  CD
Sbjct: 699 TLSSLHKLEMVNCD 712
>AT5G63020.1 | chr5:25283252-25286002 REVERSE LENGTH=889
          Length = 888

 Score =  113 bits (283), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 241/571 (42%), Gaps = 94/571 (16%)

Query: 75  LRYY--FSECNAHVDGTKIDPRLPALYVEEEKLVGIHGPMEEIIELLMKEDGSGQKLKVV 132
           LRY   F+     VD  +++ R          +V +   +E     LM+++     + ++
Sbjct: 129 LRYQGDFAVVAERVDAARVEER------PTRPMVAMDPMLESAWNRLMEDE-----IGIL 177

Query: 133 SIVGFGGLGKTTLANQVYNK---IKDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSD 189
            + G GG+GKTTL + + N+   +  +FD   +I VS+   I++I      ++  +  SD
Sbjct: 178 GLHGMGGVGKTTLLSHINNRFSRVGGEFDIVIWIVVSKELQIQRIQ----DEIWEKLRSD 233

Query: 190 DDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLC 249
           ++K          K++D +     +   L++KR+ +++DDIWS      V +  P     
Sbjct: 234 NEKW-------KQKTEDIKA--SNIYNVLKHKRFVLLLDDIWSKVDLTEVGVPFPSRENG 284

Query: 250 SRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHA 309
            +I+ TTR   + + C      S   ++ L   D+  LF K++          +  V+  
Sbjct: 285 CKIVFTTR---LKEICGRMGVDSDMEVRCLAPDDAWDLFTKKVGEITLGSHPEIPTVART 341

Query: 310 IIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSL-SSAFSSQGMSD----ILLLSYYD 364
           + KKC G P            K  T  +W    + L SSA    GM D    IL  SY +
Sbjct: 342 VAKKCRGLPLALNVIGETMAYKR-TVQEWRSAIDVLTSSAAEFSGMEDEILPILKYSYDN 400

Query: 365 LPY-HLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQVGGSYFNELINRN 423
           L    LK C  Y ++FPED+ I++++L+  WI EGFI   KG+  +Q G      L+   
Sbjct: 401 LKSEQLKLCFQYCALFPEDHNIEKNDLVDYWIGEGFIDRNKGKAENQ-GYEIIGILVRSC 459

Query: 424 MIQPIDIKYDGTANACRVHDMVLNLIISISSE-----ENFLTVVDEQGYKYL----GNKI 474
           ++       +      ++HD+V  + + I+S+     ENF+     Q             
Sbjct: 460 LL------MEENQETVKMHDVVREMALWIASDFGKQKENFIVQAGLQSRNIPEIEKWKVA 513

Query: 475 RRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFCL 534
           RR+S   N++E                   S  + PE   P L      + +L+  +F  
Sbjct: 514 RRVSLMFNNIE-------------------SIRDAPES--PQL------ITLLLRKNFL- 545

Query: 535 GNGHIKYLGSFFQLKYLRVT-----SYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVV 589
             GHI    SFF+L  + V      +  +  LP++      LQ L +  + I  +P  +V
Sbjct: 546 --GHIS--SSFFRLMPMLVVLDLSMNRDLRHLPNEISECVSLQYLSLSRTRIRIWPAGLV 601

Query: 590 RLHNLARLLV--GNKVQLPDGIGDLQSLQVL 618
            L  L  L +     V+   GI  L SL+VL
Sbjct: 602 ELRKLLYLNLEYTRMVESICGISGLTSLKVL 632
>AT1G61180.2 | chr1:22551486-22554185 FORWARD LENGTH=900
          Length = 899

 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 136/532 (25%), Positives = 227/532 (42%), Gaps = 93/532 (17%)

Query: 96  PALYVEE---EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK 152
           P   VEE   +  +G    +E+    LM EDG G    ++ + G GG+GKTTL  +++NK
Sbjct: 141 PRSEVEERPTQPTIGQEDMLEKAWNRLM-EDGVG----IMGLHGMGGVGKTTLFKKIHNK 195

Query: 153 ---IKDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQ 209
              I   FD   +I VS+   I K+  D+ + +   D+   +K       + DK+ D   
Sbjct: 196 FAEIGGTFDIVIWIVVSKGVMISKLQEDIAEKLHLCDDLWKNKN------ESDKATD--- 246

Query: 210 LIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGF 269
               +   L+ KR+ +++DDIW     E + +  P      ++  TTR+  V   C    
Sbjct: 247 ----IHRVLKGKRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRSREV---CGEMG 299

Query: 270 QGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXX 329
                 +  L  +D+ +LF  ++  +  +    + E++  + +KC G P           
Sbjct: 300 DHKPMQVNCLEPEDAWELFKNKVGDNTLSSDPVIVELAREVAQKCRGLPLALNVIGETMS 359

Query: 330 XKSDTKDQWEQ---VHNSLSSAFSSQGMSDILLLSY-YDL--PYHLKTCLLYLSVFPEDY 383
            K+  + +WE    V N+ ++ FS      + +L Y YD     H+K+C LY ++FPED 
Sbjct: 360 SKTMVQ-EWEHAIHVFNTSAAEFSDMQNKILPILKYSYDSLGDEHIKSCFLYCALFPEDG 418

Query: 384 KIDRDELIWRWIAEGFITEVKGQTLDQV-------GGSYFNELINRNMIQPIDIKYDGTA 436
           +I  ++LI  WI EGFI E      DQV       G +    L   N++  +   Y    
Sbjct: 419 EIYNEKLIDYWICEGFIGE------DQVIKRARNKGYAMLGTLTRANLLTKVGTYY---- 468

Query: 437 NACRVHDMVLNLIISISSE-----ENFLTVVDEQGYKYLGNK----IRRLSFQSNSVEND 487
             C +HD+V  + + I+S+     ENF+       ++    K    +R++S   N +E +
Sbjct: 469 --CVMHDVVREMALWIASDFGKQKENFVVQAGVGLHEIPKVKDWGAVRKMSLMDNDIE-E 525

Query: 488 VNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSF-- 545
           +    K     S++ +L           FL+ + L           L    I+Y+     
Sbjct: 526 ITCESKC----SELTTL-----------FLQSNKLKN---------LPGAFIRYMQKLVV 561

Query: 546 FQLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARL 597
             L Y R       +LP+Q   L  LQ LD+  + IE  P  +  L  L  L
Sbjct: 562 LDLSYNR----DFNKLPEQISGLVSLQFLDLSNTSIEHMPIGLKELKKLTFL 609
>AT1G12210.1 | chr1:4140948-4143605 FORWARD LENGTH=886
          Length = 885

 Score =  109 bits (273), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 134/547 (24%), Positives = 234/547 (42%), Gaps = 76/547 (13%)

Query: 96  PALYVEE----EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYN 151
           P   VEE      +VG    ++++   LM++     K+ +V + G GG+GKTTL  Q+ N
Sbjct: 144 PIAEVEELPIQSTIVGQDSMLDKVWNCLMED-----KVWIVGLYGMGGVGKTTLLTQINN 198

Query: 152 K---IKDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGD-KSDDE 207
           K   +   FD   ++ VS++  + KI                 +++ +VG   D K+ ++
Sbjct: 199 KFSKLGGGFDVVIWVVVSKNATVHKI------------QKSIGEKLGLVGKNWDEKNKNQ 246

Query: 208 RQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCS 267
           R L   +   L  K++ +++DDIW     + + +  P      ++  TT +  V   C  
Sbjct: 247 RAL--DIHNVLRRKKFVLLLDDIWEKVELKVIGVPYPSGENGCKVAFTTHSKEV---CGR 301

Query: 268 GFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXX 327
               +   I  L+  ++  L  K++  +       + +++  + +KC G P         
Sbjct: 302 MGVDNPMEISCLDTGNAWDLLKKKVGENTLGSHPDIPQLARKVSEKCCGLPLALNVIGET 361

Query: 328 XXXKSDTKDQWEQVHNSLSSAFSSQGMSD----ILLLSYYDLPYH-LKTCLLYLSVFPED 382
              K  T  +W      L+SA    GM D    IL  SY  L     K+C LY S+FPED
Sbjct: 362 MSFKR-TIQEWRHATEVLTSATDFSGMEDEILPILKYSYDSLNGEDAKSCFLYCSLFPED 420

Query: 383 YKIDRDELIWRWIAEGFITEVKG--QTLDQVGGSYFNELINRNMIQPIDIKYDGTANACR 440
           ++I ++ LI  WI EGFI E +G  +  +Q G      L+  +++    ++     +   
Sbjct: 421 FEIRKEMLIEYWICEGFIKEKQGREKAFNQ-GYDILGTLVRSSLL----LEGAKDKDVVS 475

Query: 441 VHDMVLNLIISISSEENFLTVVDEQGYKYLGNKIRRLSFQSN-------SVENDVNVVQK 493
           +HDMV  + + I S+              LG    R   Q+         VEN   V + 
Sbjct: 476 MHDMVREMALWIFSD--------------LGKHKERCIVQAGIGLDELPEVENWRAVKRM 521

Query: 494 IMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRV 553
            + N +  + L   E  E I  FL+ +   V + +++  C+ +  +  L           
Sbjct: 522 SLMNNNFEKILGSPECVELITLFLQNNYKLVDISMEFFRCMPSLAVLDLSE--------- 572

Query: 554 TSYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLVGNKVQLP--DGIGD 611
            ++ +++LP++   L  LQ LD+ G+ IE+ P  +  L  L  L +    +L    GI  
Sbjct: 573 -NHSLSELPEEISELVSLQYLDLSGTYIERLPHGLHELRKLVHLKLERTRRLESISGISY 631

Query: 612 LQSLQVL 618
           L SL+ L
Sbjct: 632 LSSLRTL 638
>AT5G43740.1 | chr5:17566010-17568598 FORWARD LENGTH=863
          Length = 862

 Score =  109 bits (272), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 152/629 (24%), Positives = 278/629 (44%), Gaps = 104/629 (16%)

Query: 102 EEKLVGIHGPMEEIIEL----LMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK---IK 154
           E+KL+     +++++E+    LM ++     +  + + G GG+GKTTL   + NK   ++
Sbjct: 145 EKKLIQTTVGLDKLVEMAWSSLMNDE-----IGTLGLYGMGGVGKTTLLESLNNKFVELE 199

Query: 155 DQFDCSAFISVSQSPNIKKILFDMLKD-VTSRDNSDDDKQIKVVGVKGDKSDDERQLIGK 213
            +FD   ++ VS     K   F+ ++D +  R  SD + +           + E +    
Sbjct: 200 SEFDVVIWVVVS-----KDFQFEGIQDQILGRLRSDKEWE----------RETESKKASL 244

Query: 214 LRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSV 273
           +   LE K++ +++DD+WS      + +  P     S+I+ TTR+  V K   +  Q  V
Sbjct: 245 IYNNLERKKFVLLLDDLWSEVDMTKIGVPPPTRENGSKIVFTTRSTEVCKHMKADKQIKV 304

Query: 274 YNIQPLNEQDSKKLFLKRLFHSDSNFPTH--LEEVSHAIIKKCHGFPXXXXXXXXXXXXK 331
             + P    ++ +LF  RL   D    +H  +  ++  +  KCHG P            K
Sbjct: 305 ACLSP---DEAWELF--RLTVGDIILRSHQDIPALARIVAAKCHGLPLALNVIGKAMSCK 359

Query: 332 SDTKDQWEQVHNSLSSA-FSSQGMSD----ILLLSYYDLPY-HLKTCLLYLSVFPEDYKI 385
            +T  +W    N L+SA     GM +    IL  SY  L    +K C LY S+FPED +I
Sbjct: 360 -ETIQEWSHAINVLNSAGHEFPGMEERILPILKFSYDSLKNGEIKLCFLYCSLFPEDSEI 418

Query: 386 DRDELIWRWIAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMV 445
            +++ I  WI EGFI   +    +  G ++  ++I   +   + I+ + T N  ++HD++
Sbjct: 419 PKEKWIEYWICEGFINPNR---YEDGGTNHGYDIIGLLVRAHLLIECELTDNV-KMHDVI 474

Query: 446 LNLIISISSEENFLTVVDEQGYKYLGNKIRRLSFQSNS----VENDVN--VVQKIMDNLS 499
             + + I+S+               G +   +  +S +    + ND+N  +V+ +    +
Sbjct: 475 REMALWINSD--------------FGKQQETICVKSGAHVRMIPNDINWEIVRTMSFTCT 520

Query: 500 QVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFC--LGNGHIKYLGSFFQLKYLRVTSYG 557
           Q++ +S      K P      +LS L+++D      + N   +++     L      +  
Sbjct: 521 QIKKIS---CRSKCP------NLSTLLILDNRLLVKISNRFFRFMPKLVVLDL--SANLD 569

Query: 558 ITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARL----------LVGNKVQLPD 607
           + +LP++  NL  LQ L+I  +GI+  P  + +L  L  L          LVG    LP 
Sbjct: 570 LIKLPEEISNLGSLQYLNISLTGIKSLPVGLKKLRKLIYLNLEFTGVHGSLVGIAATLP- 628

Query: 608 GIGDLQSLQVLSSAR-----LYKPLKLVEDLRRLT-KLRTLEIV--LHGSDTLGAHEMGR 659
              +LQ L+   S       L K L+ +E L+ LT  ++ + I+  + G D L +     
Sbjct: 629 ---NLQVLKFFYSCVYVDDILMKELQDLEHLKILTANVKDVTILERIQGDDRLASSIRSL 685

Query: 660 YEEALESS---LTVLGKHKIQSLEISCCD 685
             E + +    L+ +    +Q L I  C+
Sbjct: 686 CLEDMSTPRVILSTIALGGLQQLAILMCN 714
>AT1G62630.1 | chr1:23185912-23188593 FORWARD LENGTH=894
          Length = 893

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 149/612 (24%), Positives = 269/612 (43%), Gaps = 76/612 (12%)

Query: 142 KTTLANQ---VYNKIKDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVG 198
           KTTL  Q   ++NK K  FD   ++ VSQ  N++KI  ++ + +    +    + I   G
Sbjct: 185 KTTLLTQLFNMFNKDKCGFDIGIWVVVSQEVNVEKIQDEIAQKLGLGGHEWTQRDISQKG 244

Query: 199 VKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRN 258
           V              L  FL+NK++ + +DD+W      ++ +  P      ++  T+R+
Sbjct: 245 VH-------------LFNFLKNKKFVLFLDDLWDKVELANIGVPDPRTQKGCKLAFTSRS 291

Query: 259 VNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFP 318
           +NV   C S        +Q L E  +  LF K++          + +++  + KKC G P
Sbjct: 292 LNV---CTSMGDEEPMEVQCLEENVAFDLFQKKVGQKTLGSDPGIPQLARIVAKKCCGLP 348

Query: 319 XXXXXXXXXXXXKSDTKDQWEQVHNSLSSAFSSQGMSD----ILLLSYYDLP-YHLKTCL 373
                       K   ++    +H   S A    GM D    +L  SY +L   H+K+ L
Sbjct: 349 LALNVIGETMSCKRTIQEWRNAIHVLNSYAAEFIGMEDKILPLLKYSYDNLKGEHVKSSL 408

Query: 374 LYLSVFPEDYKIDRDELIWRWIAEGFITEVKG-QTLDQVGGSYFNELINRNMI-QPIDIK 431
           LY +++PED KI +++LI  WI E  I   +G +  +  G      L+  +++ + +D+K
Sbjct: 409 LYCALYPEDAKIRKEDLIEHWICEEIIDGSEGIEKAEDKGYDIIGSLVRASLLMECVDLK 468

Query: 432 YDGTANACRVHDMVLNLIISISSEENFLTVVDEQGYKYLGNKIRRLSFQSNSVENDVNVV 491
                ++  +HD+V  + + I+SE   L +  E      G  +R +    N      NVV
Sbjct: 469 ---GKSSVIMHDVVREMALWIASE---LGIQKEAFIVRAGVGVREIPKVKN-----WNVV 517

Query: 492 QKIMDNLSQVRSL-SFFEVPEKIPPFLKFHSLSVLVL--VDYDFCLGNGHIKYLGSFF-- 546
           +++    +++  L   +E  E          L+ L+L   +Y        IK + S F  
Sbjct: 518 RRMSLMGNKIHHLVGSYECME----------LTTLLLGEGEYGSIWRWSEIKTISSEFFN 567

Query: 547 ---QLKYLRVT-SYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLV--G 600
              +L  L ++ +  + +LP++  NL  L+ L++  +GI      +  L  +  L +   
Sbjct: 568 CMPKLAVLDLSHNQSLFELPEEISNLVSLKYLNLSHTGIRHLSKGIQELKKIIHLNLEHT 627

Query: 601 NKVQLPDGIGDLQSLQVLS--SARLYKPLKLVEDLRRLTKLRTLEIVL--HGSDTLGAHE 656
           +K++  DGI  L +L+VL    +RL   L  V++L  L  L  L   +       L +H 
Sbjct: 628 SKLESIDGISSLHNLKVLKLYGSRLPWDLNTVKELETLEHLEILTTTIDPRAKQFLSSHR 687

Query: 657 MGRYEEALE--SSLTVLGKHKIQSLEISCCDYLRDKLLDLLCCTVPNIQKLVISGNCINR 714
           +      L+   S       +++SL +S  D LR+   +++CC++  I+   + G C   
Sbjct: 688 LMSRSRLLQIFGSNIFSPDRQLESLSVS-TDKLRE--FEIMCCSISEIK---MGGIC--- 738

Query: 715 PSQQMLSLVNLA 726
                LSLV++ 
Sbjct: 739 ---NFLSLVDVT 747
>AT5G43730.1 | chr5:17560267-17562813 FORWARD LENGTH=849
          Length = 848

 Score =  106 bits (265), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 240/557 (43%), Gaps = 110/557 (19%)

Query: 128 KLKVVSIVGFGGLGKTTLANQVYNK---IKDQFDCSAFISVSQSPNIKKILFDMLKDVTS 184
           +++ + + G GG+GKTTL   + NK   ++ +FD   ++ VS+   ++ I          
Sbjct: 171 EIRTLGLYGMGGIGKTTLLESLNNKFVELESEFDVVIWVVVSKDFQLEGI---------- 220

Query: 185 RDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLEN----KRYFIIVDDIWSASAWEHVR 240
                   Q +++G      + ER+   K    + N    K++ +++DD+WS      + 
Sbjct: 221 --------QDQILGRLRPDKEWERETESKKASLINNNLKRKKFVLLLDDLWSEVDLIKIG 272

Query: 241 LALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFP 300
           +  P     S+I+ TTR+  V K   +  Q  V  + P    ++ +LF  RL   D    
Sbjct: 273 VPPPSRENGSKIVFTTRSKEVCKHMKADKQIKVDCLSP---DEAWELF--RLTVGDIILR 327

Query: 301 TH--LEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSS-AFSSQGMSD- 356
           +H  +  ++  +  KCHG P            K +T  +W    N L+S      GM + 
Sbjct: 328 SHQDIPALARIVAAKCHGLPLALNVIGKAMVCK-ETVQEWRHAINVLNSPGHKFPGMEER 386

Query: 357 ---ILLLSYYDLPY-HLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVK---GQTLD 409
              IL  SY  L    +K C LY S+FPED++I++D+LI  WI EG+I   +   G T  
Sbjct: 387 ILPILKFSYDSLKNGEIKLCFLYCSLFPEDFEIEKDKLIEYWICEGYINPNRYEDGGT-- 444

Query: 410 QVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVVDEQGYKY 469
             G      L+  +++   ++      +  ++HD++  + + I+S+              
Sbjct: 445 NQGYDIIGLLVRAHLLIECEL-----TDKVKMHDVIREMALWINSD-------------- 485

Query: 470 LGNKIRRLSFQSNS----VENDVNVVQKIMDNLSQVRSLSFFEVP-EKIPPFLKFHSLSV 524
            GN+   +  +S +    + ND+        +   VR +S      EKI       +LS 
Sbjct: 486 FGNQQETICVKSGAHVRLIPNDI--------SWEIVRQMSLISTQVEKIACSPNCPNLST 537

Query: 525 LV-----LVDYDFCLGNGHIKYLGSFFQLKYLRV----TSYGITQLPDQFGNLHYLQTLD 575
           L+     LVD            +G F  +  L V    T++ + +LP++  NL  LQ L+
Sbjct: 538 LLLPYNKLVDIS----------VGFFLFMPKLVVLDLSTNWSLIELPEEISNLGSLQYLN 587

Query: 576 IRGSGIEKFPPTVVRLHNLARL----------LVGNKVQLPDGIGDLQSLQVLSSARLYK 625
           +  +GI+  P  + +L  L  L          LVG    LP    +LQ L++  S     
Sbjct: 588 LSLTGIKSLPVGLKKLRKLIYLNLEFTNVLESLVGIATTLP----NLQVLKLFYSLFCVD 643

Query: 626 PLKLVEDLRRLTKLRTL 642
            + ++E+L+RL  L+ L
Sbjct: 644 DI-IMEELQRLKHLKIL 659
>AT4G27220.1 | chr4:13633953-13636712 REVERSE LENGTH=920
          Length = 919

 Score =  106 bits (264), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 125/521 (23%), Positives = 226/521 (43%), Gaps = 85/521 (16%)

Query: 132 VSIVGFGGLGKTTLANQVYNKI-----KDQFDCSAFISVSQSPNIKKILFDMLKDVTSRD 186
           + + G GG+GKTTL   + N +       QF    +++VS+  ++K++  D+ K +  R 
Sbjct: 137 IGVWGMGGVGKTTLVRTLNNDLLKYAATQQFALVIWVTVSKDFDLKRVQMDIAKRLGKRF 196

Query: 187 NSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALP-E 245
             +   Q+ +          ER         ++ K + +I+DD+W     + + + L  E
Sbjct: 197 TREQMNQLGLTIC-------ER--------LIDLKNFLLILDDVWHPIDLDQLGIPLALE 241

Query: 246 NSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLF---LKRLFHSDSNFPTH 302
            S  S+++ T+R + V   C          +  L E+++ +LF   +  + +SD+  P  
Sbjct: 242 RSKDSKVVLTSRRLEV---CQQMMTNENIKVACLQEKEAWELFCHNVGEVANSDNVKPIA 298

Query: 303 LEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAFSS----QGMSDIL 358
            ++VSH    +C G P            K    + W+   N L  +  S    + +   L
Sbjct: 299 -KDVSH----ECCGLPLAIITIGRTLRGKPQV-EVWKHTLNLLKRSAPSIDTEEKIFGTL 352

Query: 359 LLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQVGGSYFNE 418
            LSY  L  ++K+C L+ ++FPEDY I   ELI  W+AEG +           G  ++ +
Sbjct: 353 KLSYDFLQDNMKSCFLFCALFPEDYSIKVSELIMYWVAEGLLD----------GQHHYED 402

Query: 419 LINRNMIQPIDIK-----YDG-TANACRVHDMVLNLIISISSEENFLTVVDEQGYKYLGN 472
           ++N  +     +K      DG + +  ++HD+V +  I   S +        +G+  L  
Sbjct: 403 MMNEGVTLVERLKDSCLLEDGDSCDTVKMHDVVRDFAIWFMSSQG-------EGFHSLVM 455

Query: 473 KIRRL-SFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYD 531
             R L  F  +   + V  V  + + L            E++P  +    +  LVL+   
Sbjct: 456 AGRGLIEFPQDKFVSSVQRVSLMANKL------------ERLPNNV-IEGVETLVLL--- 499

Query: 532 FCLGNGHIK-----YLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGSGIEKFPP 586
              GN H+K     +L +F  L+ L ++   I  LPD F NLH L++L +R     +  P
Sbjct: 500 -LQGNSHVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSFSNLHSLRSLVLRNCKKLRNLP 558

Query: 587 TVVRLHNLARLLVGNKV--QLPDGIGDLQSLQVLSSARLYK 625
           ++  L  L  L +      +LP G+  L SL+ +  +  Y+
Sbjct: 559 SLESLVKLQFLDLHESAIRELPRGLEALSSLRYICVSNTYQ 599
>AT4G27190.1 | chr4:13620977-13623934 REVERSE LENGTH=986
          Length = 985

 Score =  105 bits (263), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 136/587 (23%), Positives = 262/587 (44%), Gaps = 77/587 (13%)

Query: 108 IHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQ-----FDCSAF 162
           +H  M   +   +++  + +K + + + G GG+GKTTL   + NK++++     F    F
Sbjct: 143 VHQTMASNMLAKIRDGLTSEKAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIF 202

Query: 163 ISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRV-FLENK 221
           + VS+  + +++     K +  R   D D Q++         + E +L  ++ V  ++ +
Sbjct: 203 VIVSKEFDPREVQ----KQIAER--LDIDTQME---------ESEEKLARRIYVGLMKER 247

Query: 222 RYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNE 281
           ++ +I+DD+W     + + +   E +  S++I T+R + V +S  +        +  L E
Sbjct: 248 KFLLILDDVWKPIDLDLLGIPRTEENKGSKVILTSRFLEVCRSMKTDLD---VRVDCLLE 304

Query: 282 QDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQV 341
           +D+ +LF K     D     H+ +++ A+ ++C G P            K + K  W  V
Sbjct: 305 EDAWELFCKN--AGDVVRSDHVRKIAKAVSQECGGLPLAIITVGTAMRGKKNVK-LWNHV 361

Query: 342 HNSLSSAFS-----SQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIA 396
            + LS +        + +   L LSY  L    K C L  ++FPEDY I+  E++  W+A
Sbjct: 362 LSKLSKSVPWIKSIEEKIFQPLKLSYDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMA 421

Query: 397 EGFITEVKGQ--TLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNL---IIS 451
           EGF+ E+  Q  ++++ G +    L +  +++  D +     +  ++HD+V +    I+S
Sbjct: 422 EGFMEELGSQEDSMNE-GITTVESLKDYCLLEDGDRR-----DTVKMHDVVRDFAIWIMS 475

Query: 452 ISSEENFLTVVDEQGYK-----YLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSF 506
            S +++   V+   G +      L   +RR+S  +N +E+  ++V++     S +     
Sbjct: 476 SSQDDSHSLVMSGTGLQDIRQDKLAPSLRRVSLMNNKLESLPDLVEEFCVKTSVLLLQGN 535

Query: 507 FEVPEKIPPFLK-FHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVTS------YGIT 559
           F + E    FL+ F +L +L        L    IK   S   L+   + S      + + 
Sbjct: 536 FLLKEVPIGFLQAFPTLRIL-------NLSGTRIKSFPSCSLLRLFSLHSLFLRDCFKLV 588

Query: 560 QLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLVGNKVQLP-------DGIGDL 612
           +LP     L  L+ LD+ G+ I +FP  +  L     L +   + L          +  L
Sbjct: 589 KLPS-LETLAKLELLDLCGTHILEFPRGLEELKRFRHLDLSRTLHLESIPARVVSRLSSL 647

Query: 613 QSLQVLSS-------ARLYKPLKLVEDLRRLTKLRTLEIVLHGSDTL 652
           ++L + SS           K    VE++  L +L+ L I LH S  L
Sbjct: 648 ETLDMTSSHYRWSVQGETQKGQATVEEIGCLQRLQVLSIRLHSSPFL 694
>AT1G61190.1 | chr1:22557602-22560687 FORWARD LENGTH=968
          Length = 967

 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 129/509 (25%), Positives = 218/509 (42%), Gaps = 89/509 (17%)

Query: 120 MKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQ---FDCSAFISVSQSPNIKKILF 176
           + EDG G    ++ + G GG+GKTTL  +++NK  +    FD   +I VSQ   + K+  
Sbjct: 168 LMEDGVG----IMGLHGMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSKLQE 223

Query: 177 DMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAW 236
           D+ + +   D+   +K       + DK+ D  ++       L+ KR+ +++DDIW     
Sbjct: 224 DIAEKLHLCDDLWKNKN------ESDKATDIHRV-------LKGKRFVLMLDDIWEKVDL 270

Query: 237 EHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSD 296
           E + +  P      ++  TTR+    K C          ++ L  +D+ +LF  ++  + 
Sbjct: 271 EAIGIPYPSEVNKCKVAFTTRD---QKVCGQMGDHKPMQVKCLEPEDAWELFKNKVGDNT 327

Query: 297 SNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLS-SAFSSQGMS 355
                 +  ++  + +KC G P            K+  + +WE   + L+ SA     M 
Sbjct: 328 LRSDPVIVGLAREVAQKCRGLPLALSCIGETMASKTMVQ-EWEHAIDVLTRSAAEFSDMQ 386

Query: 356 D----ILLLSYYDLP-YHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQ 410
           +    IL  SY  L   H+K+C LY ++FPED KID   LI +WI EGFI E      DQ
Sbjct: 387 NKILPILKYSYDSLEDEHIKSCFLYCALFPEDDKIDTKTLINKWICEGFIGE------DQ 440

Query: 411 V-------GGSYFNELINRNMIQPID--IKYDGTANACRVHDMVLNLIISISSE-----E 456
           V       G      LI  N++      +K+        +HD+V  + + I+S+     E
Sbjct: 441 VIKRARNKGYEMLGTLIRANLLTNDRGFVKWHVV-----MHDVVREMALWIASDFGKQKE 495

Query: 457 NFLTVVDEQGYKYLGNK----IRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEK 512
           N++       ++    K    +RR+S   N +E ++    K     S++ +L        
Sbjct: 496 NYVVRARVGLHEIPKVKDWGAVRRMSLMMNEIE-EITCESKC----SELTTL-------- 542

Query: 513 IPPFLKFHSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQ 572
              FL+ + L           L    I+Y+     L       +   +LP+Q   L  LQ
Sbjct: 543 ---FLQSNQLKN---------LSGEFIRYMQKLVVLDLSHNPDF--NELPEQISGLVSLQ 588

Query: 573 TLDIRGSGIEKFPPTVVRLHNLARLLVGN 601
            LD+  + IE+ P   V L  L +L+  N
Sbjct: 589 YLDLSWTRIEQLP---VGLKELKKLIFLN 614
>AT1G61310.1 | chr1:22613166-22615943 REVERSE LENGTH=926
          Length = 925

 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 225/521 (43%), Gaps = 79/521 (15%)

Query: 96  PALYVEE---EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNK 152
           P   VEE   +  +G    +E+    LM EDG G    ++ + G GG+GKTTL  +++NK
Sbjct: 143 PRSEVEERPTQPTIGQEEMLEKAWNRLM-EDGVG----IMGLHGMGGVGKTTLFKKIHNK 197

Query: 153 ---IKDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQ 209
              I   FD   +I VSQ   + K+  D+ + +   D+   +K       + DK+ D   
Sbjct: 198 FAEIGGTFDIVIWIVVSQGAKLSKLQEDIAEKLHLCDDLWKNKN------ESDKATD--- 248

Query: 210 LIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGF 269
               +   L+ KR+ +++DDIW     E + +  P      ++  TTR+  V   C    
Sbjct: 249 ----IHRVLKGKRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRSREV---CGEMG 301

Query: 270 QGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXX 329
                 +  L  +D+ +LF  ++  +  +    +  ++  + +KC G P           
Sbjct: 302 DHKPMQVNCLEPEDAWELFKNKVGDNTLSSDPVIVGLAREVAQKCRGLPLALNVIGETMA 361

Query: 330 XKSDTKDQWEQVHNSLS-SAFSSQGMSD----ILLLSYYDL-PYHLKTCLLYLSVFPEDY 383
            K+  + +WE   + L+ SA    GM +    IL  SY  L   H+K+C LY ++FPED 
Sbjct: 362 SKTMVQ-EWEYAIDVLTRSAAEFSGMENKILPILKYSYDSLGDEHIKSCFLYCALFPEDG 420

Query: 384 KIDRDELIWRWIAEGFITEVKGQTLDQV-------GGSYFNELINRNMIQPIDIKYDGTA 436
           +I  + LI + I EGFI E      DQV       G +    L   N++  +  +     
Sbjct: 421 QIYTETLIDKLICEGFIGE------DQVIKRARNKGYAMLGTLTRANLLTKVGTELANLL 474

Query: 437 NA-----CRVHDMVLNLIISISSE-----ENFLTVVDEQGYKYLGNK----IRRLSFQSN 482
                  C +HD+V  + + I+S+     ENF+       ++    K    +RR+S   N
Sbjct: 475 TKVSIYHCVMHDVVREMALWIASDFGKQKENFVVQASAGLHEIPEVKDWGAVRRMSLMRN 534

Query: 483 SV-----ENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKF-HSLSVLVLVD-YDFCLG 535
            +     E+  + +  +    +Q+++LS          F+++   L VL L D  DF   
Sbjct: 535 EIEEITCESKCSELTTLFLQSNQLKNLS--------GEFIRYMQKLVVLDLSDNRDF--- 583

Query: 536 NGHIKYLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQTLDI 576
           N   + +     L+YL ++   I QLP     L  L  LD+
Sbjct: 584 NELPEQISGLVSLQYLDLSFTRIEQLPVGLKELKKLTFLDL 624
>AT1G61300.1 | chr1:22607714-22610175 REVERSE LENGTH=763
          Length = 762

 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 213/485 (43%), Gaps = 85/485 (17%)

Query: 128 KLKVVSIVGFGGLGKTTLANQVYNK---IKDQFDCSAFISVSQSPNIKKILFDMLKDVTS 184
           ++ ++ + G GG+GKTTL  +++NK   +  +FD   +I VS+   + K+  D+ + +  
Sbjct: 60  RVGIMGLHGMGGVGKTTLFKKIHNKFAKMSSRFDIVIWIVVSKGAKLSKLQEDIAEKLHL 119

Query: 185 RDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALP 244
            D+   +K       + DK+ D  ++       L+ KR+ +++DDIW     E + +  P
Sbjct: 120 CDDLWKNKN------ESDKATDIHRV-------LKGKRFVLMLDDIWEKVDLEAIGVPYP 166

Query: 245 ENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLE 304
                 ++  TTR+    K C          ++ L  +D+ +LF  ++  +       + 
Sbjct: 167 SEVNKCKVAFTTRD---QKVCGEMGDHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIV 223

Query: 305 EVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLS---SAFSSQGMSDILLLS 361
           E++  + +KC G P            K+  + +WE   + L+   + FS+ G   + +L 
Sbjct: 224 ELAREVAQKCRGLPLALSVIGETMASKTMVQ-EWEHAIDVLTRSAAEFSNMGNKILPILK 282

Query: 362 Y-YDL--PYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQV------- 411
           Y YD     H+K+C LY ++FPED +I  ++LI  WI EGFI E      DQV       
Sbjct: 283 YSYDSLGDEHIKSCFLYCALFPEDDEIYNEKLIDYWICEGFIGE------DQVIKRARNK 336

Query: 412 GGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSE-----ENFLTV----V 462
           G      L   N++  +     GT +   +HD+V  + + I+S+     ENF+      +
Sbjct: 337 GYEMLGTLTLANLLTKV-----GTEHVV-MHDVVREMALWIASDFGKQKENFVVRARVGL 390

Query: 463 DEQGYKYLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSL 522
            E+        +RR+S   N +E ++    K     S++ +L           FL+ + L
Sbjct: 391 HERPEAKDWGAVRRMSLMDNHIE-EITCESKC----SELTTL-----------FLQSNQL 434

Query: 523 SVLVLVDYDFCLGNGHIKYLGSF--FQLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGSG 580
                      L    I+Y+       L Y R       +LP+Q   L  LQ LD+  + 
Sbjct: 435 K---------NLSGEFIRYMQKLVVLDLSYNR----DFNKLPEQISGLVSLQFLDLSNTS 481

Query: 581 IEKFP 585
           I++ P
Sbjct: 482 IKQLP 486
>AT1G12280.1 | chr1:4174875-4177559 REVERSE LENGTH=895
          Length = 894

 Score =  103 bits (256), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 216/499 (43%), Gaps = 75/499 (15%)

Query: 120 MKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAF-----ISVSQSPNIKKI 174
           + EDG     ++V + G GG+GKTTL  ++ NK  ++  CS F     + VS+SP+I +I
Sbjct: 171 LTEDGD----EIVGLYGMGGVGKTTLLTRINNKFSEK--CSGFGVVIWVVVSKSPDIHRI 224

Query: 175 LFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSAS 234
                         D  K++ + G + D  ++ ++ +    V L  +++ +++DDIW   
Sbjct: 225 ------------QGDIGKRLDLGGEEWDNVNENQRALDIYNV-LGKQKFVLLLDDIWEKV 271

Query: 235 AWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFH 294
             E + +  P      +++ TTR+ +V   C          +  L   ++ +LF  ++  
Sbjct: 272 NLEVLGVPYPSRQNGCKVVFTTRSRDV---CGRMRVDDPMEVSCLEPNEAWELFQMKVGE 328

Query: 295 SDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSS-AFSSQG 353
           +       + E++  +  KC G P            K   + +W    + LSS A    G
Sbjct: 329 NTLKGHPDIPELARKVAGKCCGLPLALNVIGETMACKRMVQ-EWRNAIDVLSSYAAEFPG 387

Query: 354 MSDILLL---SYYDL-PYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFI--TEVKGQT 407
           M  IL +   SY +L    +K C LY S+FPEDY+++++ LI  WI EGFI   E + + 
Sbjct: 388 MEQILPILKYSYDNLNKEQVKPCFLYCSLFPEDYRMEKERLIDYWICEGFIDENESRERA 447

Query: 408 LDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVVDEQGY 467
           L Q G      L+   ++    I  +      ++HD+V  + + I+S+            
Sbjct: 448 LSQ-GYEIIGILVRACLLLEEAINKEQV----KMHDVVREMALWIASD------------ 490

Query: 468 KYLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKI----PPFLKFHSLS 523
             LG    R   Q      +V  V+    N S VR +S  E   +I    P  L+   L+
Sbjct: 491 --LGEHKERCIVQVGVGLREVPKVK----NWSSVRRMSLMENEIEILSGSPECLE---LT 541

Query: 524 VLVLVDYDFCLGNGHIKYLGSFFQLKYLRVT-----SYGITQLPDQFGNLHYLQTLDIRG 578
            L L   D  L   HI     FF+   + V      +  + +LP+Q   L  L+ LD+  
Sbjct: 542 TLFLQKNDSLL---HIS--DEFFRCIPMLVVLDLSGNSSLRKLPNQISKLVSLRYLDLSW 596

Query: 579 SGIEKFPPTVVRLHNLARL 597
           + I++ P  +  L  L  L
Sbjct: 597 TYIKRLPVGLQELKKLRYL 615
>AT4G26090.1 | chr4:13224596-13227325 FORWARD LENGTH=910
          Length = 909

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 150/686 (21%), Positives = 293/686 (42%), Gaps = 118/686 (17%)

Query: 105 LVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKI---KDQFDCSA 161
           +VG    ME+++E L +E+  G    ++ + G GG+GKTTL   + N++     Q+D   
Sbjct: 155 VVGNTTMMEQVLEFLSEEEERG----IIGVYGPGGVGKTTLMQSINNELITKGHQYDVLI 210

Query: 162 FISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVF---- 217
           ++ +S                  R+  +   Q + VG +   S DE++  G+ R      
Sbjct: 211 WVQMS------------------REFGECTIQ-QAVGARLGLSWDEKE-TGENRALKIYR 250

Query: 218 -LENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNI 276
            L  KR+ +++DD+W     E   +  P+     +++ TTR++ +  +  + ++     +
Sbjct: 251 ALRQKRFLLLLDDVWEEIDLEKTGVPRPDRENKCKVMFTTRSIALCNNMGAEYK---LRV 307

Query: 277 QPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKD 336
           + L ++ + +LF  +++  D    + +  ++  I+ KC G P            + +T++
Sbjct: 308 EFLEKKHAWELFCSKVWRKDLLESSSIRRLAEIIVSKCGGLPLALITLGGAMAHR-ETEE 366

Query: 337 QWEQVHNSLSS-AFSSQGMSDILLL---SYYDLPYHL-KTCLLYLSVFPEDYKIDRDELI 391
           +W      L+      +GM+ +  L   SY +L   L ++C LY ++FPE++ I+ ++L+
Sbjct: 367 EWIHASEVLTRFPAEMKGMNYVFALLKFSYDNLESDLLRSCFLYCALFPEEHSIEIEQLV 426

Query: 392 WRWIAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIIS 451
             W+ EGF+T   G      G     +L    +++  D K        ++H++V +  + 
Sbjct: 427 EYWVGEGFLTSSHGVNTIYKGYFLIGDLKAACLLETGDEK-----TQVKMHNVVRSFALW 481

Query: 452 ISSEENF---LTVVDEQGYKYLGNKIR--RLSFQSNSVENDVNVV-QKIMDNLSQVRSLS 505
           ++SE+     L +V+         K    R +   + ++N +  + +K++        L 
Sbjct: 482 MASEQGTYKELILVEPSMGHTEAPKAENWRQALVISLLDNRIQTLPEKLICPKLTTLMLQ 541

Query: 506 FFEVPEKIPPFLKFHSLSVLVLVDYDFCLGNG---HIKYLGSFFQLKYLRVTSYGITQLP 562
                +KIP     H + VL ++D  F         IKYL    +L +L ++   I+ LP
Sbjct: 542 QNSSLKKIPTGFFMH-MPVLRVLDLSFTSITEIPLSIKYL---VELYHLSMSGTKISVLP 597

Query: 563 DQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLVGNKVQLPDGIGDLQSLQVLSSAR 622
            + GNL  L+ LD++ +   +F  T+ R                D I  L  L+VL+   
Sbjct: 598 QELGNLRKLKHLDLQRT---QFLQTIPR----------------DAICWLSKLEVLNLYY 638

Query: 623 LYKPLKL------------VEDLRRLTKLRTLEIVLHGSDTLGA-HEMGRYEEALE---- 665
            Y   +L              DL  L  L TL I +   +TL    E G   + ++    
Sbjct: 639 SYAGWELQSFGEDEAEELGFADLEYLENLTTLGITVLSLETLKTLFEFGALHKHIQHLHV 698

Query: 666 -----------SSLTVLGKHKIQSLEISCC----------DYLRDKLLDLLCCTVPNIQK 704
                       SLT  G++ ++ L I  C          D+  D L  L   T+ ++  
Sbjct: 699 EECNELLYFNLPSLTNHGRN-LRRLSIKSCHDLEYLVTPADFENDWLPSLEVLTLHSLHN 757

Query: 705 LV-ISGNCINRPSQQMLSLVNLAHLD 729
           L  + GN +++   + +  +N++H +
Sbjct: 758 LTRVWGNSVSQDCLRNIRCINISHCN 783
>AT1G12290.1 | chr1:4178593-4181247 REVERSE LENGTH=885
          Length = 884

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 177/743 (23%), Positives = 321/743 (43%), Gaps = 105/743 (14%)

Query: 102 EEKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFD--- 158
           +  +VG    +E+  + LM +DG+    K++ + G GG+GKTTL  Q+ N+  D  D   
Sbjct: 153 QPTIVGQETILEKAWDHLM-DDGT----KIMGLYGMGGVGKTTLLTQINNRFCDTDDGVE 207

Query: 159 CSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFL 218
              ++ VS    I KI              +  ++I  +GV+ ++  + ++ +  L  FL
Sbjct: 208 IVIWVVVSGDLQIHKI------------QKEIGEKIGFIGVEWNQKSENQKAVDILN-FL 254

Query: 219 ENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQP 278
             KR+ +++DDIW       + +  P +    +I  TTR  +V   C S        ++ 
Sbjct: 255 SKKRFVLLLDDIWKRVELTEIGIPNPTSENGCKIAFTTRCQSV---CASMGVHDPMEVRC 311

Query: 279 LNEQDSKKLFLKRLFHSDSNFPTH--LEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKD 336
           L   D+  LF K++   D    +H  + E++  + + C G P            K  T+ 
Sbjct: 312 LGADDAWDLFKKKV--GDITLSSHPDIPEIARKVAQACCGLPLALNVIGETMACKKTTQ- 368

Query: 337 QWEQ---VHNSLSSAFSS--QGMSDILLLSYYDLPYH-LKTCLLYLSVFPEDYKIDRDEL 390
           +W++   V  + ++ F +  + +  IL  SY +L    +KTC LY S+FPED  I+++ L
Sbjct: 369 EWDRAVDVSTTYAANFGAVKERILPILKYSYDNLESESVKTCFLYCSLFPEDDLIEKERL 428

Query: 391 IWRWIAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANA--CRVHDMVLNL 448
           I  WI EGFI   + +    VG  Y  E++   +   + ++     N    ++HD+V  +
Sbjct: 429 IDYWICEGFIDGDENKK-GAVGEGY--EILGTLVCASLLVEGGKFNNKSYVKMHDVVREM 485

Query: 449 IISISSEENFLTVVDEQGYKYLGNKIRRLSFQSNSVE--NDVNVVQKIMDNLSQVRSLSF 506
            + I+S+            K+  N I R  F+ N +    D  VV ++  +L   R    
Sbjct: 486 ALWIASDLR----------KHKDNCIVRAGFRLNEIPKVKDWKVVSRM--SLVNNRIKEI 533

Query: 507 FEVPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIKYL-GSFF----QLKYLRVT-SYGITQ 560
              PE          L+ L L D      N H+  + G FF    +L  L ++ +  ++ 
Sbjct: 534 HGSPE-------CPKLTTLFLQD------NRHLVNISGEFFRSMPRLVVLDLSWNVNLSG 580

Query: 561 LPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLA-----RLLVGNKVQLPDGIGDLQSL 615
           LPDQ   L  L+ LD+  S I + P  +++L  L       +L    V   D + +L+++
Sbjct: 581 LPDQISELVSLRYLDLSYSSIGRLPVGLLKLKKLMHLNLESMLCLESVSGIDHLSNLKTV 640

Query: 616 QVLSSARLYKPLK--LVEDLRRLTKLRTLEIVLHGS--DTLGAHEMGRYEEAL------E 665
           ++L + R++  +      +     ++ T+EI+   +    L +H + R  + +      E
Sbjct: 641 RLL-NLRMWLTISLLEELERLENLEVLTIEIISSSALEQLLCSHRLVRCLQKVSVKYLDE 699

Query: 666 SSLTVLGKHKIQSLE---ISCC---DYLRDKLLDLLCCTVPNIQKLVISGNCINRPSQQM 719
            S+ +L    I  L    I  C   D + ++   L     PN+ K++I+G    +    +
Sbjct: 700 ESVRILTLPSIGDLREVFIGGCGMRDIIIERNTSLTSPCFPNLSKVLITGCNGLKDLTWL 759

Query: 720 LSLVNLAHLDIYFQRIKQEDLSVLGSISTLLYLRLKLHFVPDERLCISSQQFQSLMEFRF 779
           L   NL HL+++  R  +E +S   + +  +    KL ++              L E + 
Sbjct: 760 LFAPNLTHLNVWNSRQIEEIISQEKASTADIVPFRKLEYL----------HLWDLPELKS 809

Query: 780 IYYEGGGLRMLFQQEAMAKLRRL 802
           IY+       L Q     K R+L
Sbjct: 810 IYWNPLPFPCLNQINVQNKCRKL 832
>AT1G63360.1 | chr1:23499515-23502169 REVERSE LENGTH=885
          Length = 884

 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 152/613 (24%), Positives = 261/613 (42%), Gaps = 82/613 (13%)

Query: 142 KTTLANQVYN---KIKDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVG 198
           KTTL  Q+YN   K K  FD   ++ VSQ  +++K+                D+  + +G
Sbjct: 185 KTTLLTQLYNMFNKDKCGFDIGIWVVVSQEFHVEKV---------------QDEIAQKLG 229

Query: 199 VKGDK--SDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTT 256
           + GD+    D+ Q    L   L  K + + +DDIW       + +  P      ++  TT
Sbjct: 230 LGGDEWTQKDKSQKGICLYNILREKSFVLFLDDIWEKVDLAEIGVPDPRTKKGRKLAFTT 289

Query: 257 RNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHG 316
           R+  V   C          +Q L E  +  LF K++  +       + +++  + KKC G
Sbjct: 290 RSQEV---CARMGVEHPMEVQCLEENVAFDLFQKKVGQTTLGSDPGIPQLARIVAKKCCG 346

Query: 317 FPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAFSSQGMSD----ILLLSYYDLP-YHLKT 371
            P            K   ++    +H   S A    GM D    +L  SY +L    +K+
Sbjct: 347 LPLALNVIGETMSCKRTIQEWRHAIHVLNSYAAEFIGMEDKVLPLLKYSYDNLKGEQVKS 406

Query: 372 CLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKG-QTLDQVGGSYFNELINRNMIQPIDI 430
            LLY +++PED KI +++LI  WI E  I   +G +  +  G      L+  +++   D 
Sbjct: 407 SLLYCALYPEDAKILKEDLIEHWICEEIIDGSEGIEKAEDKGYEIIGCLVRASLLMEWD- 465

Query: 431 KYDGTANACRVHDMVLNLIISISSEENFLTVVDEQGYKYLGNKIRRLSFQSNSVENDVNV 490
             DG    C +HD+V  + + I+SE   L +  E      G  +R               
Sbjct: 466 DGDGRRAVC-MHDVVREMALWIASE---LGIQKEAFIVRAGVGVRE-------------- 507

Query: 491 VQKIMDNLSQVRSLSFFEVPEKIPPFLKFH---SLSVLVLVDYDFCLGNGHIKYLGSFF- 546
           + KI  N + VR +S  E   KI   +  +    L+ L+L   ++      +K + S F 
Sbjct: 508 IPKI-KNWNVVRRMSLME--NKIHHLVGSYECMELTTLLLGKREYGSIRSQLKTISSEFF 564

Query: 547 ----QLKYLRVT-SYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLV-- 599
               +L  L ++ +  + +LP++  NL  L+ L++  + I   P  +  L  +  L +  
Sbjct: 565 NCMPKLAVLDLSHNKSLFELPEEISNLVSLKYLNLLYTEISHLPKGIQELKKIIHLNLEY 624

Query: 600 GNKVQLPDGIGDLQSLQVLS--SARLYKPLKLVEDLRRLTKLRTLEIVL--HGSDTLGAH 655
             K++   GI  L +L+VL    +RL   L  V++L  L  L  L   +       L +H
Sbjct: 625 TRKLESITGISSLHNLKVLKLFRSRLPWDLNTVKELETLEHLEILTTTIDPRAKQFLSSH 684

Query: 656 EMGRYEEALE---SSLTVLGKHKIQSLEISCCDYLRDKLLDLLCCTVPNIQKLVISGNCI 712
            +  +   LE   SS++ L +H ++SL +S  D LR+    +  C++  I+   + G C 
Sbjct: 685 RLLSHSRLLEIYGSSVSSLNRH-LESLSVS-TDKLRE--FQIKSCSISEIK---MGGIC- 736

Query: 713 NRPSQQMLSLVNL 725
                  LSLV++
Sbjct: 737 -----NFLSLVDV 744
>AT4G10780.1 | chr4:6634779-6637457 REVERSE LENGTH=893
          Length = 892

 Score = 95.9 bits (237), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 226/522 (43%), Gaps = 74/522 (14%)

Query: 120 MKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKI---KDQFDCSAFISVSQSPNIKKILF 176
           + +DG G     + + G GG+GKTTL  Q++N +   K+  D   ++ VS    I KI  
Sbjct: 168 LMDDGVG----TMGLYGMGGVGKTTLLTQIHNTLHDTKNGVDIVIWVVVSSDLQIHKI-- 221

Query: 177 DMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAW 236
                       D  +++  +G + +K  + ++ +  L   L  KR+ +++DDIW     
Sbjct: 222 ----------QEDIGEKLGFIGKEWNKKQESQKAVDILNC-LSKKRFVLLLDDIWKKV-- 268

Query: 237 EHVRLALP----ENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRL 292
           +  ++ +P    EN    +++ TTR+++V   C          +Q L+  D+ +LF +++
Sbjct: 269 DLTKIGIPSQTRENK--CKVVFTTRSLDV---CARMGVHDPMEVQCLSTNDAWELFQEKV 323

Query: 293 FHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSS-AFSS 351
                     + E++  +  KC G P            K   + +W    + L+S A   
Sbjct: 324 GQISLGSHPDILELAKKVAGKCRGLPLALNVIGETMAGKRAVQ-EWHHAVDVLTSYAAEF 382

Query: 352 QGMSDILLL----SYYDL-PYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQ 406
            GM D +LL    SY +L   H+++C  Y +++PEDY I +  LI  WI EGFI    G+
Sbjct: 383 SGMDDHILLILKYSYDNLNDKHVRSCFQYCALYPEDYSIKKYRLIDYWICEGFIDGNIGK 442

Query: 407 TLDQVGGSYFNELINRNMIQPIDIKYDGTAN-ACRVHDMVLNLIISISSEENFLTVVDEQ 465
               V   Y  E++   +++   +  +G      ++HD+V         E    T+ D  
Sbjct: 443 E-RAVNQGY--EILG-TLVRACLLSEEGKNKLEVKMHDVV--------REMALWTLSD-- 488

Query: 466 GYKYLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVP-EKIPPFLKFHSLSV 524
               LG    R   Q+ S    +  V K+ D    VR LS      E+I    +   L+ 
Sbjct: 489 ----LGKNKERCIVQAGS---GLRKVPKVED-WGAVRRLSLMNNGIEEISGSPECPELTT 540

Query: 525 LVLVDYDFCLGNGHIKYLGSFFQ-LKYLRV----TSYGITQLPDQFGNLHYLQTLDIRGS 579
           L L +    +   HI   G FF+ ++ L V     ++ +  LP+Q   L  L+ LD+  +
Sbjct: 541 LFLQENKSLV---HIS--GEFFRHMRKLVVLDLSENHQLDGLPEQISELVALRYLDLSHT 595

Query: 580 GIEKFPPTVVRLHNLARLLVGNKVQLPD--GIGDLQSLQVLS 619
            IE  P  +  L  L  L +    +L    GI  L SL+ L 
Sbjct: 596 NIEGLPACLQDLKTLIHLNLECMRRLGSIAGISKLSSLRTLG 637
>AT5G47260.1 | chr5:19189411-19192516 FORWARD LENGTH=949
          Length = 948

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 126/544 (23%), Positives = 234/544 (43%), Gaps = 82/544 (15%)

Query: 131 VVSIVGFGGLGKTTLANQVYNKI-KDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSD 189
            + I G GG+GKTTL  ++ NK+  D F    F+ V          F+ ++ +       
Sbjct: 171 TLGIYGRGGVGKTTLLTKLRNKLLVDAFGLVIFVVVG---------FEEVESI------- 214

Query: 190 DDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLC 249
            D+  K +G++  +   ER+    L V L+ KR+ +++D I      E + +  P     
Sbjct: 215 QDEIGKRLGLQWRRETKERKAAEILAV-LKEKRFVLLLDGIQRELDLEEIGVPFPSRDNG 273

Query: 250 SRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHA 309
            +I+ TT+++       S +  +   I  L+ +++  LF + +  +       + +++  
Sbjct: 274 CKIVFTTQSLEACDE--SKWVDAKVEITCLSPEEAWDLFQETVGENTLRSHQDIPKLARV 331

Query: 310 IIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHNSLSSAFSSQGMSD---ILLLSYYDLP 366
           +   C G P            K   ++    +H   SS      M D    +L S YD  
Sbjct: 332 VASTCRGLPLALNLIGEAMSGKRTVREWRYTIHVLASSTAEFPDMEDGTLPILKSIYDNM 391

Query: 367 YH--LKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQVGGSYFNELINRNM 424
               ++ C LY ++FPE+  I +++L+  WI EG + +   +  +  G     +L+   +
Sbjct: 392 SDEIIRLCFLYCALFPENLDIGKEDLVNYWICEGILAKEDREEAEIQGYEIICDLVRMRL 451

Query: 425 IQPIDIKYDGTANACRVHDMVLNLIISISSEENFLTVVDEQGYKYLG----NKIRRLSFQ 480
           +        G  N  ++H MV  + + I+S E+F+ V  E+ ++ L       IRR+S  
Sbjct: 452 LME-----SGNGNCVKMHGMVREMALWIAS-EHFVVVGGERIHQMLNVNDWRMIRRMSVT 505

Query: 481 SNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFCLGNGHIK 540
           S  ++N  +  Q      S++ +L F                             N H+K
Sbjct: 506 STQIQNISDSPQ-----CSELTTLVFRR---------------------------NRHLK 533

Query: 541 YL-GSFFQLKYLRVT-----SYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNL 594
           ++ G+FFQ     V      +  + +LP++  +L  L+ L++  + I+  P  +  L +L
Sbjct: 534 WISGAFFQWMTGLVVLDLSFNRELAELPEEVSSLVLLRFLNLSWTCIKGLPLGLKELKSL 593

Query: 595 ARLLV--GNKVQLPDGIGDLQSLQVLSSARLYKP----LKLVEDLRRLTKLRTLEIVLHG 648
             L +   + +Q  D I  L +LQVL   RL+      LKL+ED++ L  L+ L + + G
Sbjct: 594 IHLDLDYTSNLQEVDVIASLLNLQVL---RLFHSVSMDLKLMEDIQLLKSLKELSLTVRG 650

Query: 649 SDTL 652
           S  L
Sbjct: 651 SSVL 654
>AT1G51480.1 | chr1:19090847-19094306 REVERSE LENGTH=942
          Length = 941

 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 133/591 (22%), Positives = 261/591 (44%), Gaps = 103/591 (17%)

Query: 94  RLPALYVEEEKL---VGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVY 150
           ++P   VEE+ +   VG++  +E   + LM ++     ++ + + G GG+GKTTL   + 
Sbjct: 227 KIPVPKVEEKNIHTTVGLYAMVEMAWKSLMNDE-----IRTLCLHGMGGVGKTTLLACIN 281

Query: 151 NK---IKDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDE 207
           NK   ++ +FD   ++ VS+   ++ I                  Q +++G      + E
Sbjct: 282 NKFVELESEFDVVIWVVVSKDFQLEGI------------------QDQILGRLRLDKEWE 323

Query: 208 RQLIGKLRVFLEN----KRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAK 263
           R+   K    + N    K++ +++DD+WS      + +  P     ++I+ T R+  V+K
Sbjct: 324 RETENKKASLINNNLKRKKFVLLLDDLWSEVDLNKIGVPPPTRENGAKIVFTKRSKEVSK 383

Query: 264 SCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTH--LEEVSHAIIKKCHGFPXXX 321
              +  Q  V  + P    ++ +LF  R+   D    +H  +  ++  +  KCHG P   
Sbjct: 384 YMKADMQIKVSCLSP---DEAWELF--RITVDDVILSSHEDIPALARIVAAKCHGLPLAL 438

Query: 322 XXXXXXXXXKSDTKDQWEQVHNSLSSAFSSQ--GMSDILLL----SYYDLPY-HLKTCLL 374
                    K +T  +W    N L+S    +  GM + +LL    SY  L    +K C L
Sbjct: 439 IVIGEAMACK-ETIQEWHHAINVLNSPAGHKFPGMEERILLVLKFSYDSLKNGEIKLCFL 497

Query: 375 YLSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDG 434
           Y S+FPED++I++++LI  WI EG+I   +    +  G +   ++I   +   + I+ + 
Sbjct: 498 YCSLFPEDFEIEKEKLIEYWICEGYINPNR---YEDGGTNQGYDIIGLLVRAHLLIECEL 554

Query: 435 TANACRVHDMVLNLIISISSEENFLTVVDEQGYKYLGNKIRRLSFQSNS----VENDVN- 489
           T    ++H ++  + + I+S+               G +   +  +S +    + ND+N 
Sbjct: 555 TTKV-KMHYVIREMALWINSD--------------FGKQQETICVKSGAHVRMIPNDINW 599

Query: 490 -VVQKIMDNLSQVRSLSFFEVPEKIP----PFLKFHSLSV--------LVLVDYDFCLGN 536
            +V+++    +Q+  +S       +     P+ K  ++SV        LV++D    +  
Sbjct: 600 EIVRQVSLISTQIEKISCSSKCSNLSTLLLPYNKLVNISVGFFLFMPKLVVLDLSTNMSL 659

Query: 537 GHI-KYLGSFFQLKYLRVTSYGITQLPDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLA 595
             + + + +   L+YL ++S GI  LP     L  L  L++  S          +L +  
Sbjct: 660 IELPEEISNLCSLQYLNLSSTGIKSLPGGMKKLRKLIYLNLEFS---------YKLES-- 708

Query: 596 RLLVGNKVQLPDGIGDLQSLQVLSSARLYKPLKLVEDLRRLTKLRTLEIVL 646
             LVG    LP    +LQ L++  S      + L+E+L+ +  L+ L + +
Sbjct: 709 --LVGISATLP----NLQVLKLFYSNVCVDDI-LMEELQHMDHLKILTVTI 752
>AT1G15890.1 | chr1:5461406-5463961 FORWARD LENGTH=852
          Length = 851

 Score = 89.4 bits (220), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 151/327 (46%), Gaps = 51/327 (15%)

Query: 94  RLPALYVEEEKL---VGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVY 150
           ++PA  VE++ +   VG+   +      LMK++      + + + G GG+GKTTL   + 
Sbjct: 141 KIPAPKVEKKHIQTTVGLDAMVGRAWNSLMKDER-----RTLGLYGMGGVGKTTLLASIN 195

Query: 151 NKI---KDQFDCSAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGV----KGDK 203
           NK     + FD   ++                  V S+D  ++  Q +++G     +G K
Sbjct: 196 NKFLEGMNGFDLVIWV------------------VVSKDLQNEGIQEQILGRLGLHRGWK 237

Query: 204 SDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAK 263
              E++    +   L  K++ +++DD+WS    E + +        S+I+ TTR+ +V +
Sbjct: 238 QVTEKEKASYICNILNVKKFVLLLDDLWSEVDLEKIGVPPLTRENGSKIVFTTRSKDVCR 297

Query: 264 SCCSGFQGSVYNIQPLNEQDSKKLFLKRL----FHSDSNFPTHLEEVSHAIIKKCHGFPX 319
                 +  V  + P    ++ +LF K++      S  + PT    ++  + +KC G P 
Sbjct: 298 DMEVDGEMKVDCLPP---DEAWELFQKKVGPIPLQSHEDIPT----LARKVAEKCCGLPL 350

Query: 320 XXXXXXXXXXXKSDTKDQWEQV---HNSLSSAFSS--QGMSDILLLSYYDLP-YHLKTCL 373
                      + +T  +W+ V    NS S  F S  + +  +L  SY DL    +K C 
Sbjct: 351 ALSVIGKAMASR-ETVQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDLKDEKVKLCF 409

Query: 374 LYLSVFPEDYKIDRDELIWRWIAEGFI 400
           LY S+FPEDY++ ++ELI  W+ EGFI
Sbjct: 410 LYCSLFPEDYEVRKEELIEYWMCEGFI 436
>AT5G66910.1 | chr5:26718338-26721133 REVERSE LENGTH=816
          Length = 815

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 169/715 (23%), Positives = 288/715 (40%), Gaps = 136/715 (19%)

Query: 18  DIEDCID---LFMHKLNRGDDKVNIVLK--MAKKI----RMLWSRHQIANQIQELKARVK 68
           D++D ID   L + K +  + K NI+LK    +K+    R +    Q+  Q+   + ++K
Sbjct: 68  DLKDTIDKALLLVEKCSHVE-KWNIILKSKYTRKVEEINRKMLKFCQVQLQLLLFRNQLK 126

Query: 69  EESDRR--LRYYFSECNAHVDGTKIDPRLPALY-------VEEEKLVGIHGPMEEIIELL 119
                   L  YF   N  +D     P  P +        ++   LVG+  P+ E+ + L
Sbjct: 127 SMPSMEAILNNYFQNINKKLDRLSGSPAPPLVSKRCSVPKLDNMVLVGLDWPLVELKKKL 186

Query: 120 MKEDGSGQKLKVVSIVGFGGLGKTTLANQVYN--KIKDQFDCSAFISVSQSPNIKKILFD 177
           +  D S     VV + G  G GKTTL  ++ +  +I+ +F    +  VS +PN + I+ +
Sbjct: 187 L--DNS-----VVVVSGPPGCGKTTLVTKLCDDPEIEGEFKKIFYSVVSNTPNFRAIVQN 239

Query: 178 MLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLE----NKRYFIIVDDIWSA 233
           +L+D                G      DD+ Q    LR  LE    + R  +++DD+W  
Sbjct: 240 LLQDN---------------GCGAITFDDDSQAETGLRDLLEELTKDGRILLVLDDVWQG 284

Query: 234 SAW--EHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKR 291
           S +     ++ LP+     +I+ T++    +           Y++ PL  + ++ L ++ 
Sbjct: 285 SEFLLRKFQIDLPD----YKILVTSQFDFTS-------LWPTYHLVPLKYEYARSLLIQW 333

Query: 292 LFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKS-----DTKDQWEQVHNSLS 346
                   P   E++   I+K+C+GFP            ++        + W +    L 
Sbjct: 334 ASPPLHTSPDEYEDLLQKILKRCNGFPLVIEVVGISLKGQALYLWKGQVESWSEGETILG 393

Query: 347 SAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITEVKGQ 406
           +A  +  +   L  S+  L  HLK C + +  F +D KI    +I  W+        +G 
Sbjct: 394 NA--NPTVRQRLQPSFNVLKPHLKECFMDMGSFLQDQKIRASLIIDIWME----LYGRGS 447

Query: 407 TLDQVGGSYFNELINRNMIQPIDI----KYDGTANACRV--HDMVLNLIISISSEE---- 456
           +       Y NEL ++N+++ + +    + DG  N   V  H+++  L I  S  E    
Sbjct: 448 SSTNKFMLYLNELASQNLLKLVHLGTNKREDGFYNELLVTQHNILRELAIFQSELEPIMQ 507

Query: 457 ----NFLTVVDEQGYKYLGNKI--RRLS------FQSNSVENDVNVVQKIMDNLSQVRSL 504
               N     D    + L   I  R LS      F S  +E D   V+ ++ N+S   SL
Sbjct: 508 RKKLNLEIREDNFPDECLNQPINARLLSIYTDDLFSSKWLEMDCPNVEALVLNIS---SL 564

Query: 505 SFFEVPEKIPPFL-KFHSLSVLVLVDYDFCLGN-GHIKYLGSFFQLKYLRVTSYGITQL- 561
            +      +P F+ +   L VL + ++ F      +   L S   LK +R     +T L 
Sbjct: 565 DY-----ALPSFIAEMKKLKVLTIANHGFYPARLSNFSCLSSLPNLKRIRFEKVSVTLLD 619

Query: 562 -PD--------------QFGNLHY-------------LQTLDIRGS-GIEKFP---PTVV 589
            P                FG + Y             LQ +DI     +++ P   P VV
Sbjct: 620 IPQLQLGSLKKLSFFMCSFGEVFYDTEDIDVSKALSNLQEIDIDYCYDLDELPYWIPEVV 679

Query: 590 RLHNLARLLVGNKVQLPDGIGDLQSLQVLSSARLYKPLKLVEDLRRLTKLRTLEI 644
            L  L+        QLP+ IG+L  L+VL         +L E   RL+ LR+L+I
Sbjct: 680 SLKTLSITNCNKLSQLPEAIGNLSRLEVLRMCSCMNLSELPEATERLSNLRSLDI 734
>AT5G66900.1 | chr5:26714931-26717757 REVERSE LENGTH=810
          Length = 809

 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 145/608 (23%), Positives = 253/608 (41%), Gaps = 115/608 (18%)

Query: 105 LVGIHGPMEEIIELLMKEDGSGQKLKVVSIV--GFGGLGKTTLANQVYNK--IKDQFDCS 160
           +VG+  P+ E+ + L+ +        VV++V     G GKTTL +++ +   IK +F   
Sbjct: 168 IVGLDWPLGELKKRLLDD-------SVVTLVVSAPPGCGKTTLVSRLCDDPDIKGKFKHI 220

Query: 161 AFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLEN 220
            F  VS +PN + I+ ++L+       + ++     VG+        R+L+ +L+   EN
Sbjct: 221 FFNVVSNTPNFRVIVQNLLQHNGYNALTFENDSQAEVGL--------RKLLEELK---EN 269

Query: 221 KRYFIIVDDIW--SASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQG--SVYNI 276
               +++DD+W  + S  +  ++ LP      +I+ T+R           F    S Y +
Sbjct: 270 GPILLVLDDVWRGADSFLQKFQIKLPN----YKILVTSR---------FDFPSFDSNYRL 316

Query: 277 QPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTK- 335
           +PL + D++ L +       +  P   E++   I+K+C+GFP            +S    
Sbjct: 317 KPLEDDDARALLIHWASRPCNTSPDEYEDLLQKILKRCNGFPIVIEVVGVSLKGRSLNTW 376

Query: 336 ----DQWEQVHNSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELI 391
               + W +    L   + +  + + L  S+  L  +LK C L +  F ED KI    +I
Sbjct: 377 KGQVESWSEGEKILGKPYPT--VLECLQPSFDALDPNLKECFLDMGSFLEDQKIRASVII 434

Query: 392 WRWIAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKY----DGTANACRV--HDMV 445
             W+      E+ G+    +   Y  +L ++N+++ + +      DG  N   V  HD++
Sbjct: 435 DMWV------ELYGKG-SSILYMYLEDLASQNLLKLVPLGTNEHEDGFYNDFLVTQHDIL 487

Query: 446 LNLIISISS-EENF------LTVVDEQGYKYLGNKIRR--LS------FQSNSVENDVNV 490
             L I  S  +EN       L +++     +  N I    LS      F S  +E D   
Sbjct: 488 RELAICQSEFKENLERKRLNLEILENTFPDWCLNTINASLLSISTDDLFSSKWLEMDCPN 547

Query: 491 VQKIMDNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYDFCLGN-GHIKYLGSFFQLK 549
           V+ ++ NLS     S + +P  I    K   L VL + ++ F      +   L S   LK
Sbjct: 548 VEALVLNLSS----SDYALPSFISGMKK---LKVLTITNHGFYPARLSNFSCLSSLPNLK 600

Query: 550 YLRVTSYGITQL--PD--------------QFGNLHY-------------LQTLDIRGS- 579
            +R+    IT L  P                FG + Y             LQ +DI    
Sbjct: 601 RIRLEKVSITLLDIPQLQLSSLKKLSLVMCSFGEVFYDTEDIVVSNALSKLQEIDIDYCY 660

Query: 580 GIEKFPPTVVRLHNLARLLVGN---KVQLPDGIGDLQSLQVLSSARLYKPLKLVEDLRRL 636
            +++ P  +  + +L  L + N     QLP+ IG+L  L+VL         +L E    L
Sbjct: 661 DLDELPYWISEIVSLKTLSITNCNKLSQLPEAIGNLSRLEVLRLCSSMNLSELPEATEGL 720

Query: 637 TKLRTLEI 644
           + LR L+I
Sbjct: 721 SNLRFLDI 728
>AT1G17600.1 | chr1:6053026-6056572 REVERSE LENGTH=1050
          Length = 1049

 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 30/274 (10%)

Query: 100 VEEEKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDC 159
           ++   +VG+   ME +  LL   D    ++ +V I G GG+GKT++   +Y+++  +F  
Sbjct: 179 IDSGNIVGMKAHMEGLNHLL---DQESNEVLLVGIWGMGGIGKTSIVKCLYDQLSPKFPA 235

Query: 160 SAFISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQL-----IGKL 214
             FI      NIK +         S+DN  D K ++   +     DD R         ++
Sbjct: 236 HCFIE-----NIKSV---------SKDNGHDLKHLQKELLSSILCDDIRLWSVEAGCQEI 281

Query: 215 RVFLENKRYFIIVDDIWSASAWEHVRLALPENSL--CSRIITTTRNVNVAKSCCSGFQGS 272
           +  L N++ F+++D +    A  H  LA  +N     SRII TTR++ +  +C  G +  
Sbjct: 282 KKRLGNQKVFLVLDGV-DKVAQVHA-LAKEKNWFGPGSRIIITTRDMGLLNTC--GVE-V 336

Query: 273 VYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKS 332
           VY ++ L+++D+ ++F +  F          +++S    K  HG P            ++
Sbjct: 337 VYEVKCLDDKDALQMFKQIAFEGGLPPCEGFDQLSIRASKLAHGLPSAIQAYALFLRGRT 396

Query: 333 DTKDQWEQVHNSLSSAFSSQGMSDILLLSYYDLP 366
            + ++WE+   +L S+     M +IL +SY  LP
Sbjct: 397 ASPEEWEEALGALESSLDENIM-EILKISYEGLP 429
>AT4G12010.1 | chr4:7197325-7201393 REVERSE LENGTH=1220
          Length = 1219

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 22/285 (7%)

Query: 103 EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAF 162
           E LVGI   ++ + +LL  ED     + ++ IVG  G+GKTTLA+ +Y +++ QFD S F
Sbjct: 185 EGLVGIESRLKNLEKLLSWEDL--DTVHIIGIVGMVGIGKTTLADCLYGRMRGQFDGSCF 242

Query: 163 ISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKR 222
           ++  +  + +  L  +L+ + S   +D D +I   G   ++   ER+        L++KR
Sbjct: 243 LTNIRENSGRSGLESLLQKLFSTVLNDRDLEIGAPGNAHERF--ERR--------LKSKR 292

Query: 223 YFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQ 282
             I++DD+       ++          SRII TTR+  + ++     +G  Y +  LN++
Sbjct: 293 LLIVLDDVNDEKQIRYLMGHCKWYQGGSRIIITTRDSKLIET----IKGRKYVLPKLNDR 348

Query: 283 DSKKLFLKRLFHSDSNFP-THLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQV 341
           ++ KLF    F   ++FP    E +++ ++    G P            + D    WE  
Sbjct: 349 EALKLFSLNAF--SNSFPLKEFEGLTNMVLDYAKGHPLALKVLGSDLCERDDL--YWEAK 404

Query: 342 HNSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKID 386
            + L S  S   + ++L  SY +L    K   L ++ F     +D
Sbjct: 405 LDRLKSR-SHGDIYEVLETSYEELTTEQKNVFLDIACFFRSENVD 448
>AT1G63880.1 | chr1:23712514-23716047 REVERSE LENGTH=1018
          Length = 1017

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 21/276 (7%)

Query: 105 LVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAFIS 164
           +VGI   + EI  LL   D    ++K+V+I G  G+GKTT+A  +Y  +  +F  S F+ 
Sbjct: 187 MVGIEAHLREIKSLL---DLDNVEVKIVAIAGPAGIGKTTIARALYGLLSKRFQLSCFVD 243

Query: 165 VSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYF 224
                N++        +   + +  +    KV+   G +       +G ++  L ++R  
Sbjct: 244 -----NLRGSYHSGFDEYGFKLHLQEQFLSKVLNQSGMRICH----LGAIKENLSDQRVL 294

Query: 225 IIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDS 284
           II+DD+      E +          SRI+ TT N  + +    G   + Y++   +++D+
Sbjct: 295 IILDDVNKLKQLEALANETTWFGPGSRIVVTTENKELLQQ--HGINNT-YHVGFPSDEDA 351

Query: 285 KKLFLKRLFHSDSNFPTH-LEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVHN 343
            K+     F   S  P H  EE+S ++ K C   P            K +  D+WE V  
Sbjct: 352 LKILCSYAFKQTS--PRHGFEELSESVTKLCGKLPLGLCVVGSSLRGKKE--DEWEDVVT 407

Query: 344 SLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVF 379
            L +    Q + D+L + Y  L  + +T  L++++F
Sbjct: 408 RLETIL-DQDIEDVLRVGYESLDENAQTLFLHIAIF 442
>AT5G45050.1 | chr5:18177016-18181805 REVERSE LENGTH=1373
          Length = 1372

 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 23/214 (10%)

Query: 106 VGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAFISV 165
           +GI+  + EI +++ K+      ++ V I G  G+GKTTLA  V++++  +FD   FI  
Sbjct: 143 IGIYSKLLEIEKMINKQP---LDIRCVGIWGMPGIGKTTLAKAVFDQMSGEFDAHCFIED 199

Query: 166 SQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFI 225
                 +K ++ +L++   ++N+         G  G  +      +  LR  L NKR  +
Sbjct: 200 YTKAIQEKGVYCLLEEQFLKENA---------GASGTVTK-----LSLLRDRLNNKRVLV 245

Query: 226 IVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSK 285
           ++DD+ S    E            S II T+++ +V + C       +Y +Q LNE+++ 
Sbjct: 246 VLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDKSVFRLC---RVNQIYEVQGLNEKEAL 302

Query: 286 KLFLKRLFHS-DSNFPTHLEEVSHAIIKKCHGFP 318
           +LF   L  S D     +L EVS  +IK  +G P
Sbjct: 303 QLF--SLCASIDDMAEQNLHEVSMKVIKYANGHP 334
>AT5G45260.1 | chr5:18326277-18332229 FORWARD LENGTH=1289
          Length = 1288

 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 23/213 (10%)

Query: 106 VGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAFISV 165
           +GI+  + EI  ++ K+      ++ V I G  G+GKTTLA  V++++   FD S FI  
Sbjct: 152 IGIYSKLLEIENMVNKQPIG---IRCVGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIED 208

Query: 166 SQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFI 225
                 +K L+ +L++     N                 D     +  LR  L +KR  +
Sbjct: 209 YDKSIHEKGLYCLLEEQLLPGN-----------------DATIMKLSSLRDRLNSKRVLV 251

Query: 226 IVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSK 285
           ++DD+ +A   E            S II T+R+  V   C  G    +Y +Q LNE++++
Sbjct: 252 VLDDVRNALVGESFLEGFDWLGPGSLIIITSRDKQVF--CLCGIN-QIYEVQGLNEKEAR 308

Query: 286 KLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFP 318
           +LFL      +     +L+E+S  +I   +G P
Sbjct: 309 QLFLLSASIKEDMGEQNLQELSVRVINYANGNP 341
>AT5G41740.2 | chr5:16688687-16692801 FORWARD LENGTH=1115
          Length = 1114

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 122/576 (21%), Positives = 239/576 (41%), Gaps = 104/576 (18%)

Query: 103 EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVY-NKIKDQFDCSA 161
           E +VG+   ++ +  LL  E     ++K++ I G  G+GKTT+A  ++ +++   F    
Sbjct: 174 EGMVGMEAHLKRLNSLLCLES---DEVKMIGIWGPAGIGKTTIARALFDDRLSSSFQHKC 230

Query: 162 FISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQL----IGKLRVF 217
           F+      N+K      +K V     +D D ++++      K   E  +    +G +R  
Sbjct: 231 FMG-----NLK----GSIKGV-----ADHDSKLRLQKQLLSKIFKEENMKIHHLGAIRER 276

Query: 218 LENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQ 277
           L ++R  II+DD+      E +   +      SRII TT +  + K+   G   ++Y + 
Sbjct: 277 LHDQRVLIILDDVDDLKQLEVLAKEISWFGSGSRIIGTTEDKKILKA--HGIH-NIYRVD 333

Query: 278 PLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQ 337
             +++D+ ++     F   S+ P   EE+++ + K C   P            + +   +
Sbjct: 334 FPSKKDALEILCLSAF-KQSSIPDGFEELANKVAKLCSNLP--LGLCVVGASLRGEGNQE 390

Query: 338 WEQVHNSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAE 397
           WE++ + + S+   + + DIL + Y  L  + K+  L+++ F    K+D           
Sbjct: 391 WERLLSRIESSL-DRDIDDILRIGYDRLLTNDKSLFLHIACFFNYAKVDN---------- 439

Query: 398 GFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEEN 457
             +T +   +   VG   FN L +R++++ I    DG +    + D  L++++  S E  
Sbjct: 440 --VTALLADSNLDVGNG-FNTLADRSLVR-ISTYDDGIS---VLSDSNLDIVLEQSKEPG 492

Query: 458 FLTVVDEQ-----------------GYKYLGNKIRRLSFQSNSVENDVNV---------- 490
               + E                  G  +  + I  +S   ++ E   N+          
Sbjct: 493 KREFIIEPEEIRDVLTNETGTGSVIGISFDTSNIGEVSVSKDAFEGMRNLRFLRIYRLLG 552

Query: 491 ------VQKIMDNLSQVRSLSFFEVPEK-IPPFLKFHSLSVLVLVDYDFCLGNGHIKYLG 543
                 + + MD + ++R L +   P K +P   K   L  L +   +  L  G I+ L 
Sbjct: 553 GEVTLQIPEDMDYIPRLRLLYWDRYPRKSLPRRFKPERLVELHMPRSNLELLWGGIEPLP 612

Query: 544 SF--------FQLKYL----------RVT---SYGITQLPDQFGNLHYLQTLDIRGSGIE 582
           +         ++LK +          R+T      + +LP    NLH L+ LD++   + 
Sbjct: 613 NLKIINLNRSYRLKEIPNLSKATNLERLTLESCLSLVELPSSISNLHKLEILDVKFCSML 672

Query: 583 KFPPTVVRLHNLARLLVGNKVQL---PDGIGDLQSL 615
           +  PT + L +L RL V    +L   PD   ++++L
Sbjct: 673 QVIPTNINLASLERLDVSGCSRLRTFPDISSNIKTL 708
>AT5G17680.1 | chr5:5822999-5827153 FORWARD LENGTH=1295
          Length = 1294

 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 112/529 (21%), Positives = 215/529 (40%), Gaps = 88/529 (16%)

Query: 101 EEEKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCS 160
           + + L+G+   M+ +  ++   D   + ++++ I G GG+GKTT+A  +YN++  QF   
Sbjct: 181 DSKGLIGMSSHMDFLQSMISIVD---KDVRMLGIWGMGGVGKTTIAKYLYNQLSGQFQVH 237

Query: 161 AFIS----VSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRV 216
            F+     V     ++++  + L  +    + +    +    +  ++             
Sbjct: 238 CFMENVKEVCNRYGVRRLQVEFLCRMFQERDKEAWSSVSCCNIIKER------------- 284

Query: 217 FLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNI 276
              +K  FI++DD+  +     +          SRII TTR+ ++  S   G    VY +
Sbjct: 285 -FRHKMVFIVLDDVDRSEQLNELVKETGWFGPGSRIIVTTRDRHLLLS--HGI-NLVYKV 340

Query: 277 QPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKD 336
           + L ++++ +LF    F  +   P   EE+S   +    G P            +S    
Sbjct: 341 KCLPKKEALQLFCNYAFREEIILPHGFEELSVQAVNYASGLPLALRVLGSFLYRRSQI-- 398

Query: 337 QWEQVHNSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWI- 395
           +WE     L + +    + ++L +SY  L    K   LY+S F   Y + + + + + + 
Sbjct: 399 EWESTLARLKT-YPHSDIMEVLRVSYDGLDEQEKAIFLYISCF---YNMKQVDYVRKLLD 454

Query: 396 AEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANAC-RVHDMVLNLIISISS 454
             G+  E+ G T+          L  +++I          +N C ++HD++         
Sbjct: 455 LCGYAAEI-GITI----------LTEKSLIV--------ESNGCVKIHDLL--------- 486

Query: 455 EENFLTVVDEQGYKYLGNKIRRLSFQSN-------SVENDVNVVQKIMDNLSQVRSLSFF 507
           E+    +V +Q    + N  +RL            S  +   +V+ I  NLS++      
Sbjct: 487 EQMGRELVRQQA---VNNPAQRLLLWDPEDICHLLSENSGTQLVEGISLNLSEIS----- 538

Query: 508 EVPEKIPPFLKFHSLSVLVLVDYDF------CLGNGHIKYLGSFFQLKYLRVTSYGITQL 561
           EV      F    +L +L   D  F       L NG + YL    +L+YLR   Y +  +
Sbjct: 539 EVFASDRAFEGLSNLKLLNFYDLSFDGETRVHLPNG-LSYLPR--KLRYLRWDGYPLKTM 595

Query: 562 PDQFGNLHYLQTLDIRGSGIEKFPPTVVRLHNLARLLVGNK---VQLPD 607
           P +F    +L  L +  S +EK    +  L NL ++ +      V++PD
Sbjct: 596 PSRFFP-EFLVELCMSNSNLEKLWDGIQPLRNLKKMDLSRCKYLVEVPD 643
>AT5G48770.1 | chr5:19773277-19777242 REVERSE LENGTH=1191
          Length = 1190

 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 125/294 (42%), Gaps = 26/294 (8%)

Query: 91  IDPRLPALYVEE-EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQV 149
           I  RL ++     E LVG+   ME I  LL K+  +  ++ +V I G GG+GKTT+A  +
Sbjct: 171 ISSRLASMQATSFEDLVGMEAHMENIRPLLKKDFDA--EVCMVGIWGMGGIGKTTIAKYL 228

Query: 150 YNKIKDQFDCSAFIS----VSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSD 205
           Y ++  QF   +FI     + +  ++K I   +L D+ S       K++ ++ ++ + ++
Sbjct: 229 YEQLASQFPAHSFIEDVGQICKKVDLKCIQQQLLCDILS------TKRVALMSIQ-NGAN 281

Query: 206 DERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSC 265
             R  +G L+V         ++D +        +          SRII TTR+  +  SC
Sbjct: 282 LIRSRLGTLKVLF-------VLDGVDKVEQLHALAKEASWFGPGSRIIITTRDRRLLDSC 334

Query: 266 CSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXX 325
                 + Y ++ L  +DS K+     F          E  +    +   G P       
Sbjct: 335 ---RVTNKYEVKCLQNEDSLKIVKNIAFAGGVPTLDGYERFAIRASQLAQGLPLALVAFG 391

Query: 326 XXXXXKSDTKDQWEQVHNSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVF 379
                 +   D+WE   ++L +A   Q + DIL  SY +L    KT  + ++  
Sbjct: 392 SFLRGATSI-DEWEDAIDTLETA-PHQNIMDILRSSYTNLDLRDKTIFIRVACL 443
>AT5G04720.1 | chr5:1360748-1363665 FORWARD LENGTH=812
          Length = 811

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 50/295 (16%)

Query: 106 VGIHGPMEEIIELLMKE-DGSGQKLKVVSIVGFGGLGKTTLANQVY--NKIKDQFDCSA- 161
           VG+     ++ E+L K  DG     +++ I G  G GKTTLA ++    +++  F     
Sbjct: 180 VGLDLGKRKVKEMLFKSIDGE----RLIGISGMSGSGKTTLAKELARDEEVRGHFGNKVL 235

Query: 162 FISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENK 221
           F++VSQSPN++++   +   +TS +           GV                  L   
Sbjct: 236 FLTVSQSPNLEELRAHIWGFLTSYE----------AGVGAT---------------LPES 270

Query: 222 RYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNE 281
           R  +I+DD+W+  + + +     EN      I  T  + V++S  +  + + Y+++ LNE
Sbjct: 271 RKLVILDDVWTRESLDQLMF---EN------IPGTTTLVVSRSKLADSRVT-YDVELLNE 320

Query: 282 QDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQV 341
            ++  LF   +F+         + +   ++ +C G P            K   +  WE  
Sbjct: 321 HEATALFCLSVFNQKLVPSGFSQSLVKQVVGECKGLP--LSLKVIGASLKERPEKYWEGA 378

Query: 342 HNSLSSAFSSQGMSDILLLSYYD-----LPYHLKTCLLYLSVFPEDYKIDRDELI 391
              LS    +    +  + +  +     L    + C L L  FPED KI  D LI
Sbjct: 379 VERLSRGEPADETHESRVFAQIEATLENLDPKTRDCFLVLGAFPEDKKIPLDVLI 433
>AT1G63740.1 | chr1:23645525-23648807 FORWARD LENGTH=993
          Length = 992

 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 128/562 (22%), Positives = 233/562 (41%), Gaps = 57/562 (10%)

Query: 103 EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAF 162
           E +VG+   +E+I  LL  ++    +  +V I G  G+GKTT+A  +++ + D+F  + F
Sbjct: 142 EDMVGVETHLEKIQSLLHLDNDD--EAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCF 199

Query: 163 ISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKR 222
           +      N++      L +   +    +    K++   G +  +    +  ++  L +++
Sbjct: 200 ME-----NLRGSYNSSLDEYGLKLQLQEQLLSKILNQTGMRVYN----LSAIQGMLCDQK 250

Query: 223 YFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQ 282
             II+DD+      E +          SR++ TT N  + K        + Y +    ++
Sbjct: 251 VLIILDDVDDLKQLEALANETKWFGPGSRVVVTTENQELLKQ--HDDIKNTYYVDFPTQK 308

Query: 283 DSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVH 342
           +++++F +  F   S      E +S  +IK C   P            K  T+D WE + 
Sbjct: 309 EARQIFCRYGFKQ-STPQDGFENLSERVIKLCSKLPLGLSVMGLYLRKK--TEDDWEDIL 365

Query: 343 NSLSSAFSS--QGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFI 400
           + L S+F S  + +  +L + Y  L +     L  L  F  +YK D D +          
Sbjct: 366 HRLESSFDSVDRNIERVLRVGYDGL-HEKDQLLFLLIAFFFNYK-DDDHVKAMLADNNLN 423

Query: 401 TEVKGQTLDQVGGSYFNELINR----NMIQPIDIKYDGTANACRVHDMVLNLIISISSEE 456
             +  +TL+      +  LI R    N++    ++  G     R       ++I      
Sbjct: 424 VRLGLKTLE------YKSLIQRSSGGNIVMHKLLQQVGREAVQRQEPWKRQILIDAHEIC 477

Query: 457 NFLTVVDEQGYKYLGNKIRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPF 516
           N L   D      +G     +SF  +++ N V++  K   N+  +R LS +E    +   
Sbjct: 478 NVLE-TDSGCANVMG-----ISFNVSTIPNGVHISAKAFQNMRNLRFLSIYETRRDV--- 528

Query: 517 LKFHSLSVLVLVDYDFC--LGNGHI-----KYLGSFFQLKY---LRVTSYGITQLPDQFG 566
               +L V V  D DF   L + H      K L S F+ +Y   L + +  + +L +   
Sbjct: 529 ----NLRVNVPDDMDFPHRLRSLHWEVYPGKSLPSTFRPEYLVELNLQNNKLEKLWEGTQ 584

Query: 567 NLHYLQTLDIRGSGIEKFPPTVVRLHNLARL-LVG--NKVQLPDGIGDLQSLQVLSSARL 623
            L  L  L++ GS   K  P +    NL RL L G  + V++P  +G+L  L+ L    L
Sbjct: 585 PLTNLNKLELCGSLRLKELPDLSSATNLKRLDLTGCWSLVEIPSSVGNLHKLEEL-EMNL 643

Query: 624 YKPLKLVEDLRRLTKLRTLEIV 645
              L++V     L  LR+L ++
Sbjct: 644 CLQLQVVPTHFNLASLRSLRML 665
>AT1G27170.1 | chr1:9434718-9439219 FORWARD LENGTH=1385
          Length = 1384

 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 133/314 (42%), Gaps = 30/314 (9%)

Query: 103 EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAF 162
           E +VG+  P++++  L+  E  SG  ++V+ + G GG+GKTTLA   YNKI   F+  AF
Sbjct: 187 EFIVGLESPLKDLTGLIDTESSSG--VQVLGLYGMGGIGKTTLAKAFYNKIVGNFEQRAF 244

Query: 163 IS-VSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENK 221
           IS + +  + +  L  + K +           IK +     + +D    + K++  +  K
Sbjct: 245 ISDIRERSSAENGLVTLQKTL-----------IKELFRLVPEIEDVSIGLEKIKANVHEK 293

Query: 222 RYFIIVDDIWSASAWEHVRLALPENSLCSR---IITTTRNVNVAKSCCSGFQGSVYNIQP 278
           +  +++DD+      + V   + E     +   I+ TTR+  +        Q   Y ++ 
Sbjct: 294 KIIVVLDDV---DHIDQVHALVGETRWYGQGTLIVITTRDSEILSKLSVNQQ---YEVKC 347

Query: 279 LNEQDSKKLFLKRLFHS-DSNFPT-HLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKD 336
           L E  + KLF    +HS     PT +L  +S  I++     P            K + KD
Sbjct: 348 LTEPQALKLF---SYHSLRKEEPTKNLLALSKKIVQISGLLPLAVEVFGSLLYDKKEEKD 404

Query: 337 QWEQVHNSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIA 396
            W+   + L        + D+L LS+  L    K   L ++      +I +DE++     
Sbjct: 405 -WQTQLDKLKKT-QPGNLQDVLELSFKSLDDEEKKVFLDIACLFLKMEIKKDEVVIVLKG 462

Query: 397 EGFITEVKGQTLDQ 410
            G   E     L Q
Sbjct: 463 CGLNAEAALSVLRQ 476

 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 160/401 (39%), Gaps = 84/401 (20%)

Query: 376  LSVFPEDYKIDRDELIWRWIAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGT 435
            LSV PE+               G +T +K   LD        E INR  +Q ++I    +
Sbjct: 754  LSVLPENI--------------GAMTSLKELLLDGTAIKNLPESINR--LQNLEIL---S 794

Query: 436  ANACRVHDMVLNLIISISSEENFLTVVDEQGYKYLGNKIRRLSFQSNSVENDVNVVQKIM 495
               C++ ++ L +    S E+ +L   D+   K L + I  L    +        + KI 
Sbjct: 795  LRGCKIQELPLCIGTLKSLEKLYL---DDTALKNLPSSIGDLKNLQDLHLVRCTSLSKIP 851

Query: 496  DNLSQVRSLSFF----EVPEKIPPFLKFHSLSVLVLVDYDFCLGNGHI-----KYLGSFF 546
            D++++++SL          E++P  LK  SL  L    YDF  G+          +G   
Sbjct: 852  DSINELKSLKKLFINGSAVEELP--LKPSSLPSL----YDFSAGDCKFLKQVPSSIGRLN 905

Query: 547  QLKYLRVTSYGITQLPDQFGNLHYLQTLDIR------------------------GSGIE 582
             L  L+++S  I  LP++ G LH+++ L++R                        GS IE
Sbjct: 906  SLLQLQLSSTPIEALPEEIGALHFIRELELRNCKFLKFLPKSIGDMDTLYSLNLEGSNIE 965

Query: 583  KFPPTVVRLHNLARLLVGN---KVQLPDGIGDLQSLQVLSSARLYKPLKLVEDLRR---- 635
            + P    +L  L  L + N     +LP+  GDL+SL      RLY    LV +L      
Sbjct: 966  ELPEEFGKLEKLVELRMSNCKMLKRLPESFGDLKSLH-----RLYMKETLVSELPESFGN 1020

Query: 636  LTKLRTLEIV------LHGSDTLGAHEMGRYEEALESSLTVLGKHKIQSLEISCCDYLRD 689
            L+ L  LE++      +  S+  G  E  R+ E   S   +L   ++ +        + D
Sbjct: 1021 LSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFSKLLKLEELDACSWRISGKIPD 1080

Query: 690  KLLDLLCCTVPNIQKLVISGNCINRPSQQMLSLVNLAHLDI 730
             L  L C     + KL +  N  +     ++ L NL  L +
Sbjct: 1081 DLEKLSC-----LMKLNLGNNYFHSLPSSLVKLSNLQELSL 1116
>AT1G63750.3 | chr1:23650940-23655333 FORWARD LENGTH=1132
          Length = 1131

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 149/324 (45%), Gaps = 31/324 (9%)

Query: 103 EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAF 162
           E ++G+   +++I + L++ D   + L ++ I G  G+GK+T+A  + +++ D+F  + F
Sbjct: 189 EDMMGLEAHLKKI-QSLLRLDYKDEAL-IIGISGPAGIGKSTIARALESRLSDRFQLTCF 246

Query: 163 ISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKR 222
           + +  S N      + L D   +    +    KV+   G +       +G L+  L + R
Sbjct: 247 MDLRGSEN------NGLHDYGQQLRLQEQLLAKVLNQDGTRICH----LGVLQQRLSDLR 296

Query: 223 YFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQ 282
             II+DD+      + +          SRII TT N ++ +    G   S Y++   + +
Sbjct: 297 VLIILDDVSDIKQLKALAKETTWFGPGSRIIVTTENKDLLQQ--RGID-STYHVGFPSRE 353

Query: 283 DSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQVH 342
           ++ ++F K  F   S  P   E+++  I   C   P            K   +D+WE V 
Sbjct: 354 EALEIFCKFAFEQSSP-PHAFEKLAARITHLCGNLPLGLCVMGSSLFGKK--QDEWEFVV 410

Query: 343 NSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFITE 402
           + L +    Q + D+L + Y  L  + +   L++++F  +Y+ DRD L+   +A+    +
Sbjct: 411 HRLETN-PGQEIDDVLRVGYERLHENDQMLFLHIAIF-FNYR-DRD-LVEAMLADDGNLD 466

Query: 403 VKGQTLDQVGGSYFNELINRNMIQ 426
           V         G++   LIN+++I+
Sbjct: 467 V---------GNWLKFLINKSLIE 481
>AT5G48780.1 | chr5:19777511-19779604 FORWARD LENGTH=670
          Length = 669

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 96/216 (44%), Gaps = 20/216 (9%)

Query: 103 EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAF 162
           E LVG++  M+ +  LL  E  S ++++VV I G GG+GKTTL+   Y +I  QF   AF
Sbjct: 440 EDLVGMNHRMQALSALLELE--SDKEVRVVGIWGTGGIGKTTLSRYAYERISQQFHTHAF 497

Query: 163 ISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKR 222
           +  +Q  +   +    L     R+          + V+  K   E      ++  +++++
Sbjct: 498 LENAQESSSSCLEERFLSKAIQRE---------ALAVRNSKDCPE-----IMKSLIQHRK 543

Query: 223 YFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQ 282
             +IVDD+ +    E V          SR+I T R+ +      SG +  ++ ++ L   
Sbjct: 544 VLLIVDDVDNVKTLEEVFKITSWLVPGSRVIVTARDESFL--LASGVK-YIFEVKGLRFD 600

Query: 283 DSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFP 318
            + +LF +  F   S  P    ++S   IK     P
Sbjct: 601 QALQLFYQFAFKQKSP-PVRFRQLSVRAIKLVGFLP 635
>AT5G17890.1 | chr5:5917015-5923160 FORWARD LENGTH=1614
          Length = 1613

 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 22/191 (11%)

Query: 106 VGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAFISV 165
           VGI+  + EI +LL K+    + ++ + I G  G+GKTTLA  V+N +   +D S FI  
Sbjct: 169 VGIYARLLEIEKLLYKQH---RDIRSIGIWGMPGIGKTTLAKAVFNHMSTDYDASCFIEN 225

Query: 166 SQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKL---RVFLENKR 222
                 K+ L  +LK+             ++  +  D+ D E   I +    R  L +KR
Sbjct: 226 FDEAFHKEGLHRLLKE-------------RIGKILKDEFDIESSYIMRPTLHRDKLYDKR 272

Query: 223 YFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQ 282
             +++DD+  + A E     L      S II T+ +  V   C       +Y +Q LN  
Sbjct: 273 ILVVLDDVRDSLAAESFLKRLDWFGSGSLIIITSVDKQVFAFCQI---NQIYTVQGLNVH 329

Query: 283 DSKKLFLKRLF 293
           ++ +LF + +F
Sbjct: 330 EALQLFSQSVF 340
>AT5G41550.1 | chr5:16617232-16620785 REVERSE LENGTH=1086
          Length = 1085

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 124/279 (44%), Gaps = 21/279 (7%)

Query: 103 EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAF 162
           E +VG+   + ++  LL  E   G  +K++ I G  G+GK+T+A  +YN++   F    F
Sbjct: 184 EGMVGLEAHLTKLNSLLCFE---GDDVKMIGIWGPAGIGKSTIARALYNQLSSSFQLKCF 240

Query: 163 ISVSQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKG--DKSDDERQLIGKLRVFLEN 220
           +      N+K      LK +   D+ +  K ++ + +    ++ D     +  ++ +L++
Sbjct: 241 MG-----NLK----GSLKSIVGVDHYEFQKSLQKLLLAKILNQGDMRVHNLAAIKEWLQD 291

Query: 221 KRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLN 280
           +R  II+DD+      E +   L      SRII  T +  + K    G    +Y++   +
Sbjct: 292 QRVLIILDDVDDLEQLEVLAKELSWFGSGSRIIVATEDKKILKE--HGIN-DIYHVDFPS 348

Query: 281 EQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTKDQWEQ 340
            +++ ++     F   S+ P   EE++  ++  C   P            + ++K +WE 
Sbjct: 349 MEEALEILCLSAF-KQSSVPDGFEELAKKVVHLCGNLP--LGLSIVGSSLRGESKHEWEL 405

Query: 341 VHNSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVF 379
               + ++   + +  IL + Y  L    ++  L+++ F
Sbjct: 406 QLPRIEASLDGK-IESILKVGYERLSKKNQSLFLHIACF 443
>AT5G45210.1 | chr5:18295521-18298434 FORWARD LENGTH=698
          Length = 697

 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 28/216 (12%)

Query: 106 VGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAFISV 165
           +GI+  + EI +LL K+     K   + + G  G+GKTT+A   + ++   FD S F+  
Sbjct: 171 IGIYSRLLEIEKLLCKQ---SLKFYYLGLWGMPGIGKTTIAEAAFKQMSKDFDASFFVE- 226

Query: 166 SQSPNIKKILFDMLKDV-TSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVF--LENKR 222
                      D  K+    R     ++ +K V   G        + G +  F  L  K+
Sbjct: 227 -----------DFHKEYHKGRPYKLREEHLKKVPKGG-------SIRGPILSFKELREKK 268

Query: 223 YFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQ 282
              ++DD+ +   +E     +   S  S II T+R+  V   C       V+ +  LNE+
Sbjct: 269 VLFVLDDVRNLMDFESFLGGIEGVSPGSVIILTSRDKQVLHQCQV---EDVFEVPSLNEE 325

Query: 283 DSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFP 318
           ++ +LF +  FH +      L +VS  + +   G P
Sbjct: 326 EAVRLFARTAFHKEGPSDAKLMDVSKKVARYAGGNP 361
>AT5G45500.1 | chr5:18432636-18434951 REVERSE LENGTH=772
          Length = 771

 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 71/315 (22%), Positives = 137/315 (43%), Gaps = 28/315 (8%)

Query: 351 SQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWIAEGFIT--EVKGQ-- 406
           S+ +   +L  + +L    K CLL  +VFPE+ +++R  L++ W+ EG ++  ++  Q  
Sbjct: 245 SRAVFRYVLREFEELSDQRKICLLTFAVFPENQEVNRTMLMYWWMGEGILSTKDISSQEG 304

Query: 407 ------TLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIISISSEENFLT 460
                   + V      +  +RN+I+P++IK     ++ ++   V   ++ IS E     
Sbjct: 305 TEEVILKPEDVVKVILKDFTDRNLIEPVEIKRKVEPSSYKMAPFVHASVVLISKEIGLFD 364

Query: 461 VVDEQGYKYLGNK-IRRLSFQSNSVENDVNVVQKIMDNLSQVRSLSFFEVPEKIPPFLKF 519
           + D +    +    + ++     S        +K M+++  + ++  F V E+ P F  F
Sbjct: 365 MYDIKDKPVMKKSGMHKVCLVEGSSSQQEAKAKK-MEDVDHIETV--FNVSERFPDFT-F 420

Query: 520 HSLSVLVLVDYDFCLGNGHIKYLGSFFQLKYLRVTSYGI-TQLPDQFGNLH---YLQTLD 575
              S          L     + L  F+  ++ R     I  + P+   NL     L+ L 
Sbjct: 421 KWFSEDKPTRNKLTLSKVTYQKLKVFYLGRWERTAKRHIEVENPELMKNLKRMIKLKLLS 480

Query: 576 IRG-SGIEKFPPTVVRLHNLARL---LVGNKVQLPDGIGDLQSLQVLSSARLYKPLKLVE 631
            +G S IE+    V +L +L  L      N  +LPD I  L++L  L     Y    +++
Sbjct: 481 FQGISRIERLDDAVCKLRDLIILDLRACYNLEKLPDKIDSLKALIYLDITDCY----MID 536

Query: 632 DL-RRLTKLRTLEIV 645
            + +RL+ L  LE++
Sbjct: 537 RMPKRLSWLDNLEVL 551
>AT1G27180.1 | chr1:9439859-9445818 FORWARD LENGTH=1557
          Length = 1556

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 112/297 (37%), Gaps = 73/297 (24%)

Query: 493  KIMDNLSQVRSLSFFEVPEKIPPFLKFHSL---------------SVLVLVDYDFCLGNG 537
            K +  L  +R  S   +PE I   +    L               S+L L D    L  G
Sbjct: 1008 KNLQKLHLMRCTSLSTIPETINKLMSLKELFINGSAVEELPIETGSLLCLTD----LSAG 1063

Query: 538  HIKYL-------GSFFQLKYLRVTSYGITQLPDQFGNLHYLQTLDIR------------- 577
              K+L       G    L  L++ S  I  LP++ G+LH+++ LD+R             
Sbjct: 1064 DCKFLKQVPSSIGGLNSLLQLQLDSTPIEALPEEIGDLHFIRQLDLRNCKSLKALPKTIG 1123

Query: 578  -----------GSGIEKFPPTVVRLHNLARLLVGN---KVQLPDGIGDLQSLQVLSSARL 623
                       GS IE+ P    +L NL  L + N     +LP   GDL+SL      RL
Sbjct: 1124 KMDTLYSLNLVGSNIEELPEEFGKLENLVELRMNNCKMLKRLPKSFGDLKSLH-----RL 1178

Query: 624  YKPLKLVEDLRR----LTKLRTLEIV------LHGSDTLGAHEMGRYEEALESSLTVLGK 673
            Y    LV +L      L+ L  LE++      +  S+  G  E  R+ E   S   +L  
Sbjct: 1179 YMQETLVAELPESFGNLSNLMVLEMLKKPLFRISESNVPGTSEEPRFVEVPNSFSKLLKL 1238

Query: 674  HKIQSLEISCCDYLRDKLLDLLCCTVPNIQKLVISGNCINRPSQQMLSLVNLAHLDI 730
             ++ +        + D L  L C     + KL +  N  +     ++ L NL  L +
Sbjct: 1239 EELDACSWRISGKIPDDLEKLSC-----LMKLNLGNNYFHSLPSSLVKLSNLQELSL 1290
>AT4G09430.1 | chr4:5970932-5975375 FORWARD LENGTH=1040
          Length = 1039

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 150/339 (44%), Gaps = 58/339 (17%)

Query: 105 LVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAFIS 164
           LVG+   ME++  LL KE  S  +++++ I+G GG+GKT +AN +YN+   ++    FI 
Sbjct: 186 LVGMDAHMEKMQLLLDKEPKS--EVRMIGILGMGGIGKTAIANYLYNQFSHEYWAHCFIE 243

Query: 165 VSQSPN-----IKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLE 219
            + + N      +K+L  +  D  ++  + +   +K+ G+                  L+
Sbjct: 244 DAWNTNDPTHLQRKLLSHICNDENAKLFTREAGAMKIKGI------------------LK 285

Query: 220 NKRYFIIVDDIWSASAWEHVRLALPENSL---CSRIITTTRNVNVAKSCCSGFQGSVYNI 276
           +K++F+++D +  A   E V     E S     S II TTR+  +  SC      +VY +
Sbjct: 286 HKKFFLVIDGVNKA---EQVHALAKERSWFGPGSLIIITTRDRGLLNSCGV---NNVYEV 339

Query: 277 QPLNEQDSKKLFLKRLFHSDSNFPTH-LEEVSHAIIKKCHGFPXXXXXXXXXXXXKSDTK 335
           + L+ +D+ ++F K  F    N P H  E +     +  HG P            ++ T 
Sbjct: 340 KCLDSKDALQVFEKFAF-GGRNPPFHGSERLFTRASQLAHGLPYALVAFASHLSEQT-TI 397

Query: 336 DQWEQVHNSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELIWRWI 395
           + WE     L   +  + + +IL  SY DL Y+ ++  L ++              + W+
Sbjct: 398 EGWEDELFRLED-YPQKNVEEILRASYDDLDYYEQSVFLQVACLFNGS--------FLWL 448

Query: 396 AEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDG 434
              F+ ++         GS  N L  +++   +DI  DG
Sbjct: 449 IRAFLGKL---------GSRINSLRAKSL---LDISNDG 475
>AT3G04220.1 | chr3:1109118-1112188 REVERSE LENGTH=868
          Length = 867

 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 124/588 (21%), Positives = 239/588 (40%), Gaps = 100/588 (17%)

Query: 103 EKLVGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAF 162
           + L+G+   ME++  LL   D    ++K + I G  G+GKTT+A  +YN+  D+F  S F
Sbjct: 235 DDLIGMGDHMEKMKPLL---DIDSDEMKTIGIWGPPGVGKTTIARSLYNQHSDKFQLSVF 291

Query: 163 I-SVSQSPNIKKILFD----------MLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLI 211
           + S+  +  I     D           L  +T+++N     QI  +GV  ++ +D++ L 
Sbjct: 292 MESIKTAYTIPACSDDYYEKLQLQQRFLSQITNQENV----QIPHLGVAQERLNDKKVL- 346

Query: 212 GKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQG 271
               V +++    + VD +   + W             SRII TT++  + ++   G + 
Sbjct: 347 ----VVIDDVNQSVQVDALAKENDWL---------GPGSRIIITTQDRGILRA--HGIE- 390

Query: 272 SVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFPXXXXXXXXXXXXK 331
            +Y +   N +++ ++F    F   S +    EE++  +       P            +
Sbjct: 391 HIYEVDYPNYEEALQIFCMHAFGQKSPY-DGFEELAQQVTTLSGRLP--LGLKVMGSYFR 447

Query: 332 SDTKDQWEQVHNSLSSAFSSQGMSDILLLSYYDLPYHLKTCLLYLSVFPEDYKIDRDELI 391
             TK +W      + +    + +  IL LSY  L    K+  L+L+     +  D  EL+
Sbjct: 448 GMTKQEWTMALPRVRTHLDGK-IESILKLSYDALCDVDKSLFLHLAC---SFHNDDTELV 503

Query: 392 WRWIAEGFITEVKGQTLDQVGGSYFNELINRNMIQPIDIKYDGTANACRVHDMVLNLIIS 451
            + + + F    +G           + L  +++I  +D++        R+H ++  L   
Sbjct: 504 EQQLGKKFSDLRQG----------LHVLAEKSLIH-MDLRL------IRMHVLLAQLGRE 546

Query: 452 I--------SSEENFL--------TVVDEQGYKYLGNKIRRLSFQSNSVENDVNVVQKIM 495
           I          +  FL         + D+ G +     +  + F  N++E ++++ +K  
Sbjct: 547 IVRKQSIHEPGQRQFLVDATDIREVLTDDTGSR----SVIGIDFDFNTMEKELDISEKAF 602

Query: 496 DNLSQVRSLSFFEVPEKIPPFLKFHSLSVLVLVDYD----FCLG----NGHIKYLGSFFQ 547
             +S ++ +  +           F      V +DYD    F  G     G +  L   ++
Sbjct: 603 RGMSNLQFIRIYGDLFSRHGVYYFGGRGHRVSLDYDSKLHFPRGLDYLPGKLSKLEKLWE 662

Query: 548 -------LKYLRVT-SYGITQLPDQFGNLHYLQTLDI-RGSGIEKFPPTVVRLHNLARLL 598
                  L++L +T S  + +LPD       LQ L I R S + K P ++    NL ++ 
Sbjct: 663 GIQPLRNLEWLDLTCSRNLKELPD-LSTATNLQRLSIERCSSLVKLPSSIGEATNLKKIN 721

Query: 599 VG---NKVQLPDGIGDLQSLQVLSSARLYKPLKLVEDLRRLTKLRTLE 643
           +    + V+LP   G+L +LQ L        ++L      L  + +LE
Sbjct: 722 LRECLSLVELPSSFGNLTNLQELDLRECSSLVELPTSFGNLANVESLE 769
>AT3G51560.1 | chr3:19121808-19125913 REVERSE LENGTH=1254
          Length = 1253

 Score = 49.7 bits (117), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 18/213 (8%)

Query: 106 VGIHGPMEEIIELLMKEDGSGQKLKVVSIVGFGGLGKTTLANQVYNKIKDQFDCSAFISV 165
           +GI+  + +I  L+ K+      ++ + I G  G+GKTTLA   ++++   ++ S FI  
Sbjct: 160 IGIYSKLGKIETLIYKQPWG---VRSIGIWGMPGIGKTTLAKAAFDQLSGDYEASCFIKD 216

Query: 166 SQSPNIKKILFDMLKDVTSRDNSDDDKQIKVVGVKGDKSDDERQLIGKLRVFLENKRYFI 225
                 +K L+ +L+    +   ++          G KS   R ++  LR  L +KR  +
Sbjct: 217 FNKAFHEKGLYGLLEAHFGKILREE---------LGIKSSITRPIL--LRNVLRHKRVLV 265

Query: 226 IVDDIWSASAWEHVRLALPENSLCSRIITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSK 285
           ++DD+      E            S II T+R+  V   C       +Y +  LNE+++ 
Sbjct: 266 VLDDVCKPLDAESFLGGFDWFCPGSLIIITSRDKQVFSIC---RVDQIYEVPGLNEEEAL 322

Query: 286 KLFLKRLFHSDSNFPTHLEEVSHAIIKKCHGFP 318
           +LF +  F  +      L+++S  +I   +G P
Sbjct: 323 QLFSRCAFGKEI-IHESLQKLSKKVIDYANGNP 354
>AT5G36930.2 | chr5:14567771-14571916 REVERSE LENGTH=1192
          Length = 1191

 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 35/247 (14%)

Query: 80  SECNAHVDGTKIDPRLPALYVE-EEKLVGIHGPMEEIIELL-MKEDGSGQKLKVVSIVGF 137
           +EC A +   +I  RLP  Y+      VG+   ++ I  LL +  DG    ++V+ I G 
Sbjct: 166 AECIADIT-REILKRLPCQYLHVPSYAVGLRSRLQHISSLLSIGSDG----VRVIVIYGM 220

Query: 138 GGLGKTTLANQVYNKIKDQFDCSAFI----SVSQSPNIKKIL-FDMLKDVTSRDNSDDDK 192
           GG+GKTTLA   +N+    F+ S+F+      S+ P  +  L   +L D+  R++     
Sbjct: 221 GGIGKTTLAKVAFNEFSHLFEGSSFLENFREYSKKPEGRTHLQHQLLSDILRRND----- 275

Query: 193 QIKVVGVKG-DKSDDERQLIGKLRVFLENKRYFIIVDDIWSASAWEHVRLALPENSLCSR 251
               +  KG D +  ER           +KR  ++VDD+          +        SR
Sbjct: 276 ----IEFKGLDHAVKER---------FRSKRVLLVVDDVDDVHQLNSAAIDRDCFGHGSR 322

Query: 252 IITTTRNVNVAKSCCSGFQGSVYNIQPLNEQDSKKLFLKRLFHSDSNFPTHLEEVSHAII 311
           II TTRN+++ K   +  +GS Y+ + L+  +S +LF    F + S  P    + S  ++
Sbjct: 323 IIITTRNMHLLKQLRA--EGS-YSPKELDGDESLELFSWHAFRT-SEPPKEFLQHSEEVV 378

Query: 312 KKCHGFP 318
             C G P
Sbjct: 379 TYCAGLP 385
  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.138    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,725,435
Number of extensions: 797766
Number of successful extensions: 3327
Number of sequences better than 1.0e-05: 86
Number of HSP's gapped: 3102
Number of HSP's successfully gapped: 89
Length of query: 880
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 773
Effective length of database: 8,173,057
Effective search space: 6317773061
Effective search space used: 6317773061
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 116 (49.3 bits)