Os12g0273000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NB-ARC domain containing protein.
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Os12g0273000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NB-ARC domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.64 | 0.573 | 2.73 | 0.123 | 0.0514 | -3.58 | -0.231 | 16.8 | 0.222 | 18 | 48.98 | 233 | -- | -- |
| 166.57 | 0.606 | 2.78 | 0.0914 | 0.0763 | -0.135 | 0.22 | -- | 0.217 | 17 | 48.98 | 233 | -- | -- |
| 148.68 | 0.568 | 2.74 | 0.129 | 0.0516 | -3.61 | -- | 16.7 | 0.217 | 20.4 | 48.93 | 232 | -- | -- |
| 148.83 | 0.568 | 2.81 | -0.0978 | 0.0142 | 3.56 | -- | -- | 0.105 | 4.5 | 46 | 175 | -- | -- |
| 148.46 | 0.567 | 2.73 | 0.0987 | -- | -5.72 | -- | 21.9 | 0.221 | -- | 47.92 | 211 | -- | -- |
| 166.62 | 0.605 | 2.78 | 0.0858 | 0.076 | -- | 0.206 | -- | 0.218 | 17.3 | -- | -- | -- | -- |
| 166.72 | 0.605 | 2.78 | 0.0853 | 0.0785 | -- | -- | -- | 0.219 | 17.8 | -- | -- | -- | -- |
| 147.65 | 0.566 | 2.78 | -0.0524 | -- | 3.66 | -- | -- | 0.234 | -- | 46 | 175 | -- | -- |
| 147.78 | 0.566 | 2.78 | -- | 0.0012 | 3.4 | -- | -- | 0.22 | 16.5 | 46 | 175 | -- | -- |
| 167.04 | 0.604 | 2.78 | 0.0829 | -- | -- | -- | -- | 0.217 | -- | -- | -- | -- | -- |
| 166.91 | 0.604 | 2.78 | -- | 0.0772 | -- | -- | -- | 0.209 | 17.8 | -- | -- | -- | -- |
| 147.72 | 0.566 | 2.78 | -- | -- | 3.57 | -- | -- | 0.236 | -- | 46 | 175 | -- | -- |
| 167.22 | 0.604 | 2.78 | -- | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.12 | wind | 3.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 135.55 | humidity | 50.0 | 90 | < th | dose independent | rect. | 15 | 2 |
| 37 | 135.56 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 116 | 135.67 | humidity | 50.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 118 | 135.68 | wind | 1.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 122 | 135.68 | wind | 1.0 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 214 | 136.49 | humidity | 50.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 215 | 137.31 | humidity | 50.0 | 90 | < th | dose independent | sin | 12 | NA |
| 216 | 137.67 | humidity | 50.0 | 90 | > th | dose independent | sin | 12 | NA |
| 226 | 139.86 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 236 | 142.11 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 249 | 142.53 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 276 | 143.34 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 279 | 143.34 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 283 | 143.34 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 289 | 143.34 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 290 | 143.34 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 310 | 143.34 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 315 | 143.46 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 316 | 143.47 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 320 | 143.58 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 321 | 143.58 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 326 | 143.77 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 329 | 143.82 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 330 | 143.82 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 332 | 143.82 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 333 | 143.82 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 337 | 143.82 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 339 | 143.82 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 344 | 143.82 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 345 | 143.82 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 346 | 143.82 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 351 | 143.82 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 353 | 143.86 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 360 | 144.04 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 366 | 144.34 | temperature | 30.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 368 | 144.42 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 431 | 144.97 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 23 |
| 433 | 145.06 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 444 | 145.61 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 445 | 145.62 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 665 | 148.69 | temperature | 30.0 | 30 | > th | dose independent | sin | 14 | NA |
| 747 | 149.54 | temperature | 30.0 | 30 | < th | dose independent | sin | 14 | NA |
| 765 | 149.58 | humidity | 50.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 951 | 150.68 | humidity | 50.0 | 270 | < th | dose dependent | no | NA | NA |