FiT-DB / Search/ Help/ Sample detail

Os12g0271700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Solanesyl diphosphate synthase 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0266) R2 : 0.757
β1 : -1.69 (0.0975) R2dD : 0.166 R2D : 0.0653
β2 : 2.14 (0.0694) R2dC : 0.51 R2C : 0.437
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.991 (0.0568) R2dN8 : 0.217 R2N8 : 0.0888
σ : 0.501
deviance : 114.24
__
_____
C
peak time of C : 6.42
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
94.59 0.457 11.6 -1.72 2.25 -0.965 1.08 -0.363 -1 4.68 18.96 10 -- --
94.97 0.457 11.6 -1.73 2.2 -0.886 1 -- -0.993 4.85 18.96 10 -- --
97.08 0.462 11.6 -1.72 2.22 -0.946 -- -0.172 -0.999 4.7 18.96 10 -- --
97.24 0.462 11.6 -1.72 2.22 -0.95 -- -- -0.998 4.7 18.96 10 -- --
334.22 0.856 11.6 -1.62 -- -0.429 -- -0.0667 -0.953 -- 8.294 6 -- --
111.02 0.494 11.5 -1.7 2.14 -- 1.14 -- -0.988 6.44 -- -- -- --
114.24 0.501 11.6 -1.69 2.14 -- -- -- -0.991 6.42 -- -- -- --
334.22 0.855 11.6 -1.62 -- -0.429 -- -- -0.953 -- 8.17 6 -- --
174.77 0.616 11.5 -- 2.2 -0.913 -- -- -0.813 4.75 16.94 8 -- --
352.81 0.878 11.6 -1.63 -- -- -- -- -0.946 -- -- -- -- --
189.46 0.644 11.5 -- 2.12 -- -- -- -0.803 6.46 -- -- -- --
403.53 0.939 11.6 -- -- -0.443 -- -- -0.773 -- 8.64 4 -- --
423.27 0.96 11.6 -- -- -- -- -- -0.765 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.51 humidity 70.0 10 > th dose dependent rect. 1 17
15 87.36 radiation 20.0 30 < th dose dependent rect. 1 17
35 87.95 radiation 10.0 10 < th dose dependent sin 1 NA
61 89.07 precipitation 0.1 270 < th dose independent rect. 18 18
62 89.07 humidity 50.0 10 > th dose dependent rect. 1 9
64 89.07 precipitation 0.1 270 < th dose dependent rect. 18 18
66 89.12 atmosphere 995.0 270 > th dose independent rect. 12 6
77 89.22 humidity 50.0 270 > th dose dependent rect. 22 9
79 89.25 temperature 15.0 270 > th dose independent rect. 7 16
80 89.25 precipitation 0.1 270 < th dose independent rect. 19 16
81 89.25 precipitation 0.1 270 < th dose dependent rect. 19 16
87 89.29 radiation 10.0 90 < th dose independent rect. 1 17
90 89.37 temperature 15.0 270 > th dose independent rect. 18 18
94 89.43 atmosphere 995.0 270 > th dose independent rect. 11 8
95 89.44 temperature 15.0 270 > th dose independent rect. 19 16
103 89.53 atmosphere 1010.0 270 < th dose independent rect. 11 8
109 89.59 humidity 90.0 90 < th dose independent rect. 20 16
113 89.66 precipitation 0.1 270 < th dose independent rect. 7 16
115 89.66 precipitation 0.1 270 < th dose dependent rect. 7 16
139 89.87 temperature 30.0 270 < th dose independent rect. 18 18
146 89.93 radiation 20.0 270 < th dose dependent rect. 23 8
150 89.96 temperature 30.0 90 < th dose independent rect. 20 16
171 90.16 atmosphere 1000.0 270 > th dose independent rect. 23 8
177 90.26 atmosphere 995.0 270 > th dose independent rect. 24 17
180 90.29 wind 9.0 270 < th dose independent rect. 12 6
188 90.32 wind 9.0 270 < th dose independent rect. 11 8
194 90.36 radiation 20.0 270 < th dose independent rect. 23 8
202 90.39 temperature 15.0 270 > th dose independent rect. 17 7
203 90.39 radiation 20.0 90 < th dose dependent rect. 1 9
206 90.40 humidity 70.0 270 > th dose independent rect. 23 8
215 90.49 temperature 10.0 270 > th dose independent rect. 23 8
216 90.49 temperature 30.0 270 < th dose independent rect. 23 8
217 90.49 humidity 50.0 270 > th dose independent rect. 23 8
227 90.51 wind 9.0 270 < th dose independent rect. 23 8
228 90.52 radiation 30.0 10 < th dose dependent rect. 1 9
232 90.57 wind 1.0 270 > th dose independent rect. 12 6
238 90.60 temperature 10.0 270 > th dose independent rect. 12 6
244 90.61 atmosphere 1015.0 270 < th dose independent rect. 23 8
257 90.69 wind 9.0 270 < th dose independent rect. 18 18
261 90.71 temperature 10.0 270 > th dose independent rect. 11 8
263 90.71 wind 9.0 270 < th dose independent rect. 19 16
265 90.71 atmosphere 995.0 270 > th dose independent rect. 19 16
292 90.86 atmosphere 995.0 270 > th dose independent rect. 18 18
300 90.89 precipitation 0.1 270 < th dose independent rect. 17 7
302 90.89 precipitation 0.1 270 < th dose dependent rect. 17 7
308 90.93 radiation 1.0 270 > th dose independent rect. 4 8
325 90.98 humidity 60.0 270 > th dose independent rect. 17 7
328 91.00 humidity 80.0 10 > th dose independent rect. 1 17
368 91.12 wind 9.0 270 < th dose independent rect. 24 17
381 91.18 wind 9.0 270 < th dose independent rect. 7 16
385 91.20 humidity 70.0 10 > th dose dependent sin 4 NA
399 91.28 radiation 20.0 270 < th dose dependent rect. 17 7
404 91.30 precipitation 0.1 270 < th dose independent rect. 12 6
406 91.30 precipitation 0.1 270 < th dose dependent rect. 12 6
420 91.32 temperature 30.0 270 < th dose dependent rect. 7 4
429 91.37 atmosphere 995.0 270 > th dose independent rect. 12 17
436 91.39 temperature 30.0 10 < th dose independent rect. 20 17
439 91.40 atmosphere 1000.0 90 > th dose independent rect. 1 8
450 91.46 humidity 50.0 270 > th dose independent rect. 19 16
462 91.50 radiation 20.0 270 < th dose independent rect. 17 7
465 91.50 temperature 10.0 270 > th dose independent rect. 24 17
466 91.50 atmosphere 1015.0 270 < th dose independent rect. 24 17
472 91.54 wind 9.0 270 < th dose independent rect. 17 7
473 91.54 radiation 1.0 270 < th dose dependent rect. 18 5
478 91.55 radiation 40.0 270 < th dose independent rect. 19 16
497 91.59 atmosphere 1000.0 10 > th dose independent rect. 1 7
508 91.63 temperature 30.0 270 < th dose independent rect. 18 5
580 91.85 radiation 1.0 270 < th dose independent rect. 18 5
581 91.85 precipitation 0.1 270 < th dose independent rect. 11 8
584 91.85 precipitation 0.1 270 < th dose dependent rect. 11 8
611 91.90 radiation 40.0 10 < th dose dependent rect. 13 19
626 91.94 temperature 10.0 270 > th dose dependent rect. 24 18
629 91.95 temperature 30.0 270 < th dose dependent rect. 8 1
636 91.96 radiation 20.0 10 < th dose dependent rect. 13 21
647 91.99 radiation 40.0 90 < th dose independent rect. 12 7
670 92.02 precipitation 0.1 270 < th dose independent rect. 23 8
674 92.02 precipitation 0.1 270 < th dose dependent rect. 23 8
701 92.09 atmosphere 995.0 90 > th dose independent rect. 19 6
757 92.22 temperature 15.0 270 > th dose independent rect. 5 7
815 92.35 precipitation 0.1 10 < th dose independent rect. 20 16
817 92.35 precipitation 0.1 10 < th dose dependent rect. 20 16
819 92.36 precipitation 0.1 270 < th dose independent rect. 5 7
821 92.36 wind 9.0 270 < th dose independent rect. 12 17
823 92.36 precipitation 0.1 270 < th dose dependent rect. 5 7
852 92.45 radiation 20.0 90 < th dose independent rect. 1 8
892 92.52 atmosphere 995.0 270 > th dose independent rect. 5 7
893 92.52 atmosphere 1015.0 270 < th dose independent rect. 5 7
894 92.52 temperature 10.0 270 > th dose independent rect. 12 17
936 92.63 wind 9.0 270 < th dose dependent rect. 18 5
948 92.68 wind 1.0 270 > th dose independent rect. 18 6
969 92.73 wind 9.0 270 < th dose independent rect. 5 7
970 92.73 atmosphere 995.0 10 > th dose independent rect. 12 8
977 92.74 radiation 1.0 90 < th dose independent sin 2 NA
983 92.76 atmosphere 1010.0 90 < th dose independent rect. 1 8
988 92.77 radiation 40.0 270 < th dose independent rect. 12 5
997 92.79 temperature 15.0 10 > th dose independent rect. 20 16