Os12g0269200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Prolamin precursor.
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Os12g0269200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Prolamin precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.17 | 0.456 | 2.94 | -0.177 | 0.0578 | -0.506 | 0.332 | 1.67 | 0.0822 | 14.4 | 1.008 | 14 | -- | -- |
| 96.62 | 0.458 | 2.93 | -0.116 | 0.0439 | -0.392 | 0.489 | -- | 0.0991 | 14.2 | 1.1 | 13 | -- | -- |
| 94.52 | 0.453 | 2.94 | -0.169 | 0.0578 | -0.5 | -- | 1.8 | 0.0827 | 13.2 | 1 | 13 | -- | -- |
| 97.51 | 0.46 | 2.92 | -0.0963 | 0.0535 | -0.38 | -- | -- | 0.101 | 13.2 | 1.085 | 13 | -- | -- |
| 94.71 | 0.453 | 2.94 | -0.171 | -- | -0.476 | -- | 1.79 | 0.0813 | -- | 1.002 | 13 | -- | -- |
| 99.99 | 0.469 | 2.93 | -0.0632 | 0.0867 | -- | -0.512 | -- | 0.0951 | 4.34 | -- | -- | -- | -- |
| 100.55 | 0.47 | 2.92 | -0.058 | 0.101 | -- | -- | -- | 0.0979 | 6.33 | -- | -- | -- | -- |
| 97.08 | 0.461 | 2.93 | -0.0882 | -- | -0.392 | -- | -- | 0.0909 | -- | 0.8654 | 16 | -- | -- |
| 97.75 | 0.46 | 2.92 | -- | 0.0556 | -0.355 | -- | -- | 0.115 | 11.5 | 1.017 | 13 | -- | -- |
| 101.08 | 0.47 | 2.92 | -0.0554 | -- | -- | -- | -- | 0.1 | -- | -- | -- | -- | -- |
| 100.64 | 0.469 | 2.92 | -- | 0.0999 | -- | -- | -- | 0.104 | 6.36 | -- | -- | -- | -- |
| 97.28 | 0.461 | 2.92 | -- | -- | -0.385 | -- | -- | 0.101 | -- | 0.8529 | 16 | -- | -- |
| 101.16 | 0.469 | 2.92 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 85.29 | wind | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 85.34 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 8 | 86.11 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 10 | 86.17 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 11 | 86.19 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 14 | 86.24 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 16 | 86.28 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 21 | 86.29 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 24 | 86.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 86.33 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 30 | 86.33 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 31 | 86.33 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 33 | 86.33 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 38 | 86.33 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 39 | 86.33 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 41 | 86.33 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 46 | 86.33 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 48 | 86.36 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 55 | 86.48 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 61 | 86.72 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 106 | 87.63 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 110 | 87.71 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 111 | 87.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 114 | 87.71 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 118 | 87.71 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 127 | 87.71 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 128 | 87.71 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 148 | 87.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 151 | 87.71 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 160 | 87.73 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 166 | 87.83 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 168 | 87.84 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 12 |
| 171 | 87.88 | wind | 1.0 | 30 | < th | dose dependent | rect. | 17 | 10 |
| 182 | 88.00 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 18 |
| 185 | 88.21 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 194 | 88.40 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 195 | 88.40 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 197 | 88.59 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 15 |
| 207 | 88.90 | wind | 1.0 | 30 | < th | dose dependent | rect. | 9 | 18 |
| 225 | 90.10 | wind | 1.0 | 30 | < th | dose dependent | rect. | 12 | 15 |
| 272 | 91.54 | wind | 1.0 | 10 | < th | dose independent | sin | 17 | NA |
| 301 | 91.95 | wind | 1.0 | 10 | > th | dose independent | sin | 17 | NA |
| 353 | 92.85 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 9 |
| 403 | 93.33 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 17 |
| 431 | 93.46 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 447 | 93.57 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 508 | 93.99 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 515 | 94.05 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 534 | 94.15 | temperature | 25.0 | 10 | < th | dose independent | rect. | 18 | 9 |
| 537 | 94.16 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 552 | 94.26 | wind | 1.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 579 | 94.37 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 22 |
| 599 | 94.47 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 606 | 94.52 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 697 | 94.87 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 704 | 94.90 | wind | 1.0 | 30 | < th | dose dependent | rect. | 1 | 10 |
| 714 | 94.96 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 19 | 12 |
| 717 | 94.98 | wind | 5.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 718 | 94.99 | wind | 5.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 720 | 95.00 | wind | 1.0 | 10 | > th | dose independent | rect. | 22 | 23 |
| 749 | 95.14 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 757 | 95.17 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 20 | 2 |
| 763 | 95.20 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 3 |
| 768 | 95.20 | radiation | 20.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 827 | 95.33 | radiation | 1.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 847 | 95.39 | wind | 1.0 | 10 | > th | dose independent | rect. | 24 | 10 |
| 849 | 95.40 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 21 | 6 |
| 853 | 95.41 | wind | 1.0 | 10 | > th | dose independent | rect. | 15 | 23 |
| 890 | 95.48 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 14 |
| 921 | 95.49 | temperature | 25.0 | 30 | > th | dose independent | rect. | 12 | 22 |
| 944 | 95.52 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 22 |
| 974 | 95.55 | wind | 1.0 | 10 | < th | dose independent | no | NA | NA |