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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0265600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Galectin, galactose-binding lectin family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4 (0.0384) R2 : 0.451
β1 : 1.58 (0.143) R2dD : 0.162 R2D : 0.179
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.72 (0.157) R2dE : 0.172 R2E : 0.27
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.443 (0.0865) R2dN8 : 0.0486 R2N8 : 0.0591
σ : 0.706
deviance : 229.99
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 28.52
memory length : 3
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
204.89 0.673 3.96 2.03 0.6 -2.35 1.36 -3.37 0.468 1.24 28.62 10 -- --
216.63 0.691 4.02 1.45 0.564 -2.24 0.218 -- 0.341 1.11 29.1 12 -- --
209.5 0.679 3.98 1.8 0.571 -2.28 -- -2.18 0.425 1.14 28.62 10 -- --
216.82 0.686 4.02 1.44 0.561 -2.26 -- -- 0.337 1.23 29.1 12 -- --
222.92 0.699 3.96 1.94 -- -1.78 -- -2.15 0.518 -- 27.68 4 -- --
287.15 0.794 3.92 1.98 0.25 -- 0.323 -- 0.792 16.7 -- -- -- --
287.4 0.794 3.92 1.98 0.251 -- -- -- 0.793 16.5 -- -- -- --
229.99 0.706 4 1.58 -- -1.72 -- -- 0.443 -- 28.52 3 -- --
265.14 0.758 4.09 -- 0.782 -2.86 -- -- 0.0619 1.61 29.23 17 -- --
290.78 0.797 3.92 1.97 -- -- -- -- 0.787 -- -- -- -- --
390.46 0.924 3.97 -- 0.215 -- -- -- 0.573 16.7 -- -- -- --
290.77 0.794 4.06 -- -- -2.18 -- -- 0.176 -- 28.41 20 -- --
392.9 0.925 3.97 -- -- -- -- -- 0.568 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 201.72 temperature 20 1440 > th dose dependent rect. 24 1
2 202.17 temperature 20 1440 > th dose dependent rect. 23 6
3 202.22 temperature 20 1440 > th dose dependent rect. 23 3
17 203.03 temperature 15 10 > th dose dependent rect. 3 23
23 203.36 temperature 25 1440 < th dose dependent rect. 21 1
31 203.95 temperature 20 1440 > th dose dependent rect. 3 1
53 205.08 temperature 30 90 < th dose dependent rect. 13 22
54 205.10 temperature 30 10 < th dose dependent rect. 1 23
55 205.18 temperature 30 30 < th dose dependent rect. 9 23
58 205.30 temperature 30 90 < th dose dependent rect. 11 23
67 205.65 temperature 30 10 < th dose dependent rect. 13 23
80 206.58 temperature 30 30 < th dose dependent rect. 19 23
85 206.67 temperature 20 10 > th dose dependent rect. 23 23
93 207.11 temperature 30 10 < th dose dependent no NA NA
117 207.91 temperature 30 10 < th dose dependent rect. 11 23
120 207.96 temperature 20 10 > th dose dependent rect. 6 23
126 208.15 temperature 30 10 < th dose dependent rect. 7 23
129 208.20 temperature 30 10 < th dose dependent rect. 17 23
132 208.29 temperature 30 90 < th dose dependent rect. 23 23
203 209.88 temperature 15 10 > th dose dependent no NA NA
218 210.01 temperature 20 1440 > th dose dependent sin 11 NA
256 210.60 temperature 30 10 < th dose dependent rect. 21 23
266 210.69 temperature 10 1440 > th dose dependent rect. 23 2
269 210.71 temperature 25 1440 < th dose dependent sin 14 NA
301 210.95 temperature 20 10 > th dose dependent rect. 13 23
378 211.85 temperature 30 270 < th dose dependent rect. 21 23
434 212.28 temperature 20 10 > th dose dependent rect. 21 23
476 212.72 temperature 20 90 > th dose dependent rect. 18 23
477 212.72 temperature 30 10 < th dose dependent rect. 5 23
502 212.98 temperature 30 1440 < th dose dependent rect. 1 1
519 213.10 temperature 15 270 > th dose dependent rect. 15 23
738 214.93 temperature 30 10 < th dose dependent rect. 23 23
774 215.15 temperature 30 4320 < th dose dependent rect. 3 1
827 215.40 temperature 20 10 > th dose dependent rect. 1 23
917 215.77 temperature 20 10 > th dose dependent rect. 15 23