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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os12g0245100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.27 (0.0257) R2 : 0.132
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.45 (0.0541) R2dN8 : 0.17 R2N8 : 0.132
σ : 0.484
deviance : 107.6
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
103.37 0.478 3.25 0.232 0.0848 0.281 -0.243 -0.652 0.546 1.23 19.33 1310 -- --
104.28 0.476 3.26 0.2 0.0999 0.283 -0.123 -- 0.538 1.03 19.33 1281 -- --
103.6 0.474 3.25 0.234 0.0835 0.282 -- -0.583 0.547 1.41 19.32 1310 -- --
104.32 0.476 3.26 0.197 0.0954 0.265 -- -- 0.529 1.2 17.32 1281 -- --
104.03 0.475 3.25 0.257 -- 0.252 -- -0.565 0.554 -- 17.52 1394 -- --
106.71 0.484 3.27 0.152 0.0438 -- -0.184 -- 0.465 2.6 -- -- -- --
106.81 0.484 3.27 0.157 0.0477 -- -- -- 0.466 3.94 -- -- -- --
104.74 0.477 3.26 0.207 -- 0.234 -- -- 0.53 -- 16.44 1381 -- --
105.24 0.478 3.26 -- 0.0744 0.253 -- -- 0.518 1.18 19.49 1283 -- --
106.94 0.483 3.27 0.159 -- -- -- -- 0.468 -- -- -- -- --
107.46 0.485 3.27 -- 0.0508 -- -- -- 0.449 3.9 -- -- -- --
105.64 0.479 3.26 -- -- 0.225 -- -- 0.509 -- 19.49 1345 -- --
107.6 0.484 3.27 -- -- -- -- -- 0.45 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 100.10 radiation 1.0 90 < th dose independent rect. 8 1
4 100.10 radiation 1.0 90 < th dose dependent rect. 8 1
11 101.75 radiation 10.0 720 < th dose independent rect. 14 4
14 102.02 radiation 10.0 720 < th dose independent rect. 14 12
17 102.16 atmosphere 1005.0 270 < th dose independent rect. 23 2
20 102.29 atmosphere 1005.0 720 > th dose independent rect. 19 3
29 102.68 wind 1.0 30 < th dose independent rect. 2 1
30 102.68 humidity 80.0 1440 > th dose dependent rect. 11 1
31 102.69 atmosphere 1005.0 720 > th dose independent rect. 21 1
39 102.80 temperature 30.0 14400 > th dose independent rect. 18 1
53 102.80 temperature 30.0 14400 > th dose dependent rect. 18 1
67 102.84 temperature 20.0 10 > th dose dependent rect. 2 1
69 102.86 wind 3.0 30 < th dose dependent rect. 2 1
78 102.95 atmosphere 1005.0 30 > th dose independent rect. 2 1
79 102.96 atmosphere 1005.0 30 > th dose dependent rect. 2 1
86 102.99 humidity 90.0 4320 > th dose dependent rect. 4 3
91 103.03 wind 1.0 720 < th dose independent rect. 16 2
92 103.03 atmosphere 1005.0 90 < th dose dependent rect. 24 3
94 103.05 wind 9.0 30 < th dose independent rect. 2 1
95 103.05 temperature 10.0 30 > th dose independent rect. 2 1
97 103.05 temperature 30.0 30 < th dose independent rect. 2 1
98 103.05 humidity 50.0 30 > th dose independent rect. 2 1
102 103.05 atmosphere 995.0 30 > th dose independent rect. 2 1
103 103.05 atmosphere 1010.0 30 < th dose independent rect. 2 1
105 103.05 radiation 1.0 30 < th dose independent rect. 2 1
110 103.05 precipitation 0.1 30 < th dose independent rect. 2 1
111 103.05 temperature 10.0 30 > th dose independent rect. 3 23
112 103.05 humidity 50.0 30 > th dose dependent rect. 2 1
115 103.05 radiation 1.0 30 < th dose dependent rect. 2 1
120 103.05 precipitation 0.1 30 < th dose dependent rect. 2 1
138 103.17 wind 1.0 43200 > th dose independent rect. 18 12
139 103.17 humidity 70.0 720 > th dose independent rect. 15 19
142 103.19 temperature 30.0 14400 < th dose independent rect. 18 12
160 103.23 temperature 30.0 14400 < th dose independent rect. 18 3
162 103.23 temperature 20.0 10 > th dose independent rect. 14 14
163 103.23 atmosphere 1015.0 30 < th dose dependent rect. 2 1
168 103.24 wind 1.0 43200 > th dose independent rect. 20 10
183 103.26 temperature 30.0 14400 < th dose independent rect. 18 6
188 103.27 temperature 30.0 14400 < th dose independent rect. 18 9
190 103.28 humidity 90.0 720 < th dose independent rect. 19 3
193 103.28 wind 1.0 43200 > th dose independent rect. 22 8
195 103.28 radiation 10.0 4320 > th dose independent rect. 16 16
196 103.29 wind 1.0 90 < th dose independent rect. 23 5
215 103.31 radiation 10.0 1440 < th dose independent sin 18 NA
228 103.32 wind 1.0 90 < th dose independent rect. 14 14
235 103.33 humidity 70.0 720 > th dose independent rect. 15 11
249 103.37 wind 1.0 90 < th dose independent rect. 24 1
250 103.37 radiation 10.0 4320 > th dose independent rect. 6 1
266 103.38 wind 1.0 90 < th dose independent rect. 23 3
274 103.39 radiation 20.0 1440 < th dose dependent rect. 11 1
276 103.40 temperature 30.0 30 < th dose dependent rect. 2 1
280 103.41 wind 1.0 90 < th dose independent rect. 9 19
286 103.43 humidity 50.0 4320 > th dose dependent rect. 4 1
306 103.45 humidity 90.0 720 < th dose dependent rect. 19 1
333 103.50 radiation 20.0 1440 < th dose independent rect. 11 1
342 103.50 radiation 10.0 720 < th dose dependent rect. 14 1
344 103.50 humidity 90.0 720 < th dose dependent rect. 18 4
349 103.51 atmosphere 1005.0 30 < th dose independent rect. 15 13
363 103.52 temperature 20.0 10 > th dose independent rect. 9 20
364 103.52 temperature 20.0 10 > th dose independent rect. 7 22
365 103.52 humidity 90.0 4320 > th dose dependent rect. 21 10
367 103.53 humidity 70.0 720 > th dose independent rect. 15 4
373 103.53 humidity 90.0 90 > th dose dependent rect. 24 3
377 103.54 wind 1.0 720 > th dose independent rect. 10 15
378 103.54 atmosphere 1010.0 90 < th dose dependent rect. 23 11
409 103.58 atmosphere 1010.0 720 < th dose dependent rect. 22 3
412 103.59 radiation 10.0 43200 > th dose independent rect. 13 1
417 103.60 wind 1.0 43200 < th dose independent rect. 18 12
423 103.61 humidity 70.0 720 > th dose independent rect. 16 2
427 103.62 humidity 90.0 90 > th dose independent rect. 23 4
428 103.62 humidity 80.0 720 < th dose independent rect. 10 4
433 103.62 wind 1.0 43200 > th dose dependent rect. 22 5
447 103.65 atmosphere 1005.0 720 < th dose independent rect. 16 9
449 103.65 humidity 80.0 720 < th dose independent rect. 10 11
450 103.65 atmosphere 1005.0 30 > th dose independent rect. 17 16
452 103.65 humidity 90.0 10 > th dose dependent rect. 24 2
455 103.66 wind 1.0 43200 < th dose independent rect. 22 7
465 103.67 wind 9.0 30 < th dose independent rect. 3 23
471 103.68 wind 9.0 4320 > th dose dependent rect. 11 2
481 103.70 wind 1.0 43200 < th dose independent rect. 20 10
486 103.71 wind 1.0 1440 > th dose independent rect. 23 1
496 103.71 radiation 10.0 720 < th dose dependent rect. 14 4
506 103.72 atmosphere 1000.0 30 > th dose dependent rect. 20 13
510 103.73 wind 1.0 720 > th dose independent rect. 19 12
515 103.73 atmosphere 1010.0 720 < th dose dependent rect. 22 1
533 103.74 atmosphere 1005.0 90 > th dose independent rect. 17 14
544 103.74 atmosphere 1000.0 30 > th dose dependent rect. 18 15
574 103.76 temperature 20.0 1440 < th dose dependent rect. 2 1
591 103.77 atmosphere 1015.0 90 < th dose dependent rect. 15 13
601 103.78 humidity 80.0 720 > th dose independent rect. 12 1
623 103.78 wind 1.0 1440 < th dose dependent rect. 23 1
646 103.79 atmosphere 995.0 720 > th dose dependent rect. 19 3
656 103.80 atmosphere 1005.0 30 > th dose independent rect. 11 22
657 103.80 radiation 20.0 1440 < th dose independent rect. 15 22
671 103.82 temperature 20.0 10 > th dose independent rect. 22 7
681 103.82 wind 1.0 90 < th dose dependent rect. 23 3
682 103.82 atmosphere 1000.0 90 > th dose dependent rect. 11 22
689 103.83 atmosphere 1005.0 30 > th dose independent rect. 17 10
693 103.83 wind 1.0 720 > th dose independent rect. 10 21
703 103.84 radiation 1.0 1440 > th dose independent rect. 9 1
704 103.84 wind 9.0 4320 > th dose independent rect. 11 2
720 103.84 humidity 90.0 4320 > th dose dependent rect. 3 9
723 103.84 humidity 90.0 4320 > th dose dependent rect. 3 12
726 103.84 humidity 90.0 4320 > th dose dependent rect. 21 15
727 103.84 atmosphere 1015.0 10 < th dose dependent rect. 14 15
729 103.84 humidity 90.0 4320 > th dose dependent rect. 10 21
731 103.85 wind 9.0 4320 < th dose independent rect. 11 2
733 103.85 atmosphere 1005.0 10 < th dose independent rect. 23 5
742 103.85 wind 1.0 720 > th dose independent rect. 19 21
746 103.85 humidity 90.0 4320 > th dose dependent sin 8 NA
751 103.85 humidity 60.0 720 > th dose dependent rect. 14 10
753 103.85 atmosphere 995.0 270 > th dose dependent rect. 17 13
759 103.86 wind 1.0 30 > th dose independent rect. 2 1
778 103.87 precipitation 0.1 720 > th dose independent rect. 15 1
779 103.87 temperature 20.0 1440 > th dose independent rect. 23 2
781 103.87 atmosphere 1005.0 720 < th dose independent rect. 19 4
815 103.87 precipitation 0.1 720 > th dose dependent rect. 15 1
821 103.87 radiation 10.0 720 < th dose dependent rect. 14 12
830 103.88 humidity 90.0 1440 > th dose independent rect. 10 4
845 103.88 wind 9.0 43200 < th dose dependent rect. 22 5
850 103.88 atmosphere 1010.0 720 < th dose dependent rect. 16 10
851 103.88 radiation 20.0 1440 < th dose dependent rect. 7 11
852 103.88 humidity 50.0 720 > th dose dependent rect. 14 12
856 103.88 radiation 20.0 1440 < th dose dependent rect. 11 22
857 103.89 temperature 25.0 720 > th dose independent rect. 21 1
863 103.89 temperature 20.0 30 > th dose independent rect. 22 13
865 103.89 humidity 80.0 720 > th dose independent rect. 9 15
867 103.89 wind 1.0 43200 > th dose dependent rect. 1 1
871 103.89 radiation 10.0 1440 < th dose dependent rect. 9 6
889 103.90 wind 3.0 43200 > th dose independent rect. 19 1
890 103.90 temperature 20.0 1440 < th dose independent rect. 23 2
913 103.91 wind 1.0 1440 < th dose independent rect. 23 1
926 103.91 radiation 20.0 1440 < th dose dependent sin 22 NA
944 103.92 temperature 20.0 1440 > th dose independent rect. 23 4
975 103.92 humidity 80.0 720 > th dose dependent rect. 9 15
983 103.92 atmosphere 1015.0 90 < th dose dependent rect. 7 22
995 103.93 humidity 80.0 720 > th dose independent rect. 10 7