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Os12g0245000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.4 (0.0344) R2 : 0.576
β1 : -1.48 (0.126) R2dD : 0.133 R2D : 0.129
β2 : 2.02 (0.0973) R2dC : 0.53 R2C : 0.146
β3 : -1.96 (0.129) R2dE : 0.286 R2E : -0.128
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.272 (0.0736) R2dN8 : 0.0163 R2N8 : 0.0304
σ : 0.644
deviance : 190.91
__
_____
C
peak time of C : 14.6
E
wheather : temperature
threshold : 41.67
memory length : 148
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 2.68
open length of G : 16.2

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
189.14 0.646 7.4 -1.44 2.03 -1.92 0.912 -0.977 0.273 14.6 42.85 145 2.75 16.2
190.6 0.643 7.4 -1.48 2.05 -1.92 0.337 -- 0.271 14.6 42.76 147 2.73 16.2
190.7 0.643 7.4 -1.45 2.02 -1.95 -- -0.305 0.267 14.6 41.68 144 2.77 16.2
190.91 0.644 7.4 -1.48 2.02 -1.96 -- -- 0.272 14.6 41.67 148 2.68 16.2
292.27 0.796 7.42 -1.44 -- -2.22 -- -2.38 0.193 -- 29.01 82 2.28 16.5
232.67 0.715 7.42 -1.32 1.67 -- 1.07 -- 0.333 16.9 -- -- -- --
235.64 0.719 7.42 -1.32 1.67 -- -- -- 0.338 16.9 -- -- -- --
293.89 0.798 7.46 -1.47 -- -1.95 -- -- 0.086 -- 29.15 77 1.73 17.1
244.64 0.728 7.36 -- 2.21 -1.64 -- -- 0.485 14.8 57.28 153 2.67 16.4
383.17 0.915 7.4 -1.38 -- -- -- -- 0.295 -- -- -- -- --
281.7 0.785 7.38 -- 1.7 -- -- -- 0.485 16.9 -- -- -- --
365.95 0.891 7.4 -- -- -1.78 -- -- 0.266 -- 29.51 71 1.5 17.2
433.65 0.972 7.36 -- -- -- -- -- 0.448 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 193.66 temperature 30.0 90 < th dose dependent rect. 3 16
2 194.36 temperature 15.0 90 > th dose dependent rect. 8 7
3 194.83 temperature 10.0 270 > th dose dependent rect. 6 8
11 196.12 temperature 15.0 10 > th dose dependent rect. 9 6
20 197.58 temperature 15.0 90 > th dose dependent rect. 20 19
23 198.09 temperature 20.0 270 > th dose independent rect. 19 18
29 198.35 temperature 30.0 10 < th dose dependent rect. 4 15
39 198.93 temperature 15.0 10 > th dose dependent rect. 21 18
49 199.24 temperature 10.0 10 > th dose dependent rect. 9 17
103 200.68 temperature 20.0 10 > th dose dependent rect. 6 9
132 201.38 temperature 10.0 10 > th dose dependent rect. 9 19
148 201.79 temperature 15.0 270 > th dose dependent rect. 8 3
152 201.89 temperature 15.0 270 > th dose dependent rect. 9 1
171 202.26 temperature 20.0 270 > th dose independent rect. 5 9
222 203.32 precipitation 0.1 270 < th dose independent rect. 14 16
224 203.32 precipitation 0.1 270 < th dose dependent rect. 14 16
239 203.55 temperature 20.0 90 > th dose independent rect. 8 7
244 203.59 temperature 20.0 270 > th dose independent rect. 6 20
256 203.76 temperature 30.0 270 < th dose dependent rect. 3 2
257 203.77 humidity 90.0 10 < th dose independent rect. 9 6
261 203.82 temperature 10.0 43200 > th dose independent rect. 10 6
269 203.89 wind 9.0 270 < th dose dependent rect. 6 8
273 203.93 humidity 90.0 90 < th dose independent rect. 8 7
274 203.93 temperature 10.0 10 > th dose dependent rect. 9 15
294 204.18 radiation 10.0 14400 < th dose dependent rect. 21 6
308 204.39 temperature 30.0 90 < th dose dependent sin 3 NA
310 204.43 temperature 30.0 90 < th dose dependent rect. 3 6
311 204.45 wind 7.0 270 < th dose independent rect. 6 8
323 204.56 precipitation 0.1 10 < th dose independent rect. 2 7
324 204.56 precipitation 0.1 10 < th dose dependent rect. 2 7
325 204.58 wind 1.0 43200 > th dose dependent rect. 1 3
331 204.66 temperature 30.0 270 < th dose dependent rect. 1 5
343 204.82 atmosphere 995.0 270 > th dose independent rect. 14 16
355 204.96 precipitation 0.1 270 < th dose independent rect. 6 8
356 204.96 precipitation 0.1 270 < th dose dependent rect. 6 8
357 204.99 wind 7.0 270 < th dose independent rect. 14 16
358 205.01 precipitation 0.1 14400 > th dose independent rect. 17 1
362 205.02 temperature 20.0 30 > th dose dependent rect. 1 14
365 205.05 humidity 50.0 90 > th dose dependent rect. 19 8
379 205.18 temperature 20.0 10 > th dose independent rect. 9 6
384 205.24 temperature 10.0 30 > th dose dependent sin 3 NA
397 205.30 radiation 20.0 4320 > th dose dependent rect. 6 2
413 205.31 wind 1.0 43200 > th dose dependent rect. 23 6
414 205.32 wind 1.0 270 > th dose independent rect. 14 16
422 205.38 wind 7.0 43200 < th dose dependent rect. 1 3
426 205.41 radiation 40.0 90 < th dose independent rect. 3 16
436 205.46 radiation 40.0 90 < th dose dependent rect. 3 16
451 205.59 radiation 40.0 270 < th dose independent rect. 14 16
456 205.61 atmosphere 995.0 270 > th dose independent rect. 6 8
457 205.61 atmosphere 1015.0 270 < th dose independent rect. 6 8
458 205.61 temperature 10.0 270 > th dose independent rect. 14 16
461 205.67 temperature 30.0 270 < th dose dependent rect. 1 8
463 205.70 wind 5.0 30 < th dose independent rect. 2 7
474 205.75 precipitation 0.1 10 < th dose independent rect. 15 18
475 205.75 precipitation 0.1 10 < th dose dependent rect. 15 18
478 205.81 temperature 30.0 10 < th dose dependent rect. 4 10
483 205.85 precipitation 0.1 90 < th dose independent rect. 8 7
484 205.85 precipitation 0.1 90 < th dose dependent rect. 8 7
487 205.88 radiation 1.0 270 < th dose dependent rect. 11 15
488 205.89 temperature 20.0 10 > th dose independent rect. 9 19
507 206.00 wind 9.0 90 < th dose independent rect. 8 7
525 206.20 precipitation 0.1 14400 < th dose independent rect. 17 1
526 206.20 precipitation 0.1 14400 < th dose dependent rect. 17 1
531 206.23 radiation 1.0 270 > th dose independent rect. 6 8
565 206.38 atmosphere 1015.0 270 < th dose dependent rect. 3 2
569 206.39 wind 3.0 43200 > th dose independent rect. 1 3
582 206.44 atmosphere 1015.0 90 < th dose independent rect. 8 7
603 206.49 atmosphere 1015.0 90 < th dose dependent rect. 3 5
610 206.52 precipitation 0.1 270 < th dose independent rect. 2 16
613 206.52 precipitation 0.1 270 < th dose dependent rect. 2 16
619 206.55 atmosphere 995.0 270 > th dose independent rect. 2 16
622 206.57 precipitation 0.1 90 < th dose independent rect. 3 5
626 206.57 precipitation 0.1 90 < th dose dependent rect. 3 5
640 206.63 humidity 60.0 270 > th dose independent rect. 18 8
650 206.68 radiation 1.0 270 < th dose dependent rect. 17 9
660 206.72 atmosphere 995.0 90 > th dose independent rect. 8 7
661 206.72 temperature 30.0 270 < th dose independent rect. 18 8
662 206.72 temperature 30.0 10 < th dose dependent rect. 4 8
667 206.76 wind 3.0 43200 < th dose independent rect. 24 4
677 206.81 radiation 1.0 270 < th dose dependent rect. 5 21
695 206.87 precipitation 0.1 270 < th dose independent rect. 3 2
697 206.87 precipitation 0.1 270 < th dose dependent rect. 3 2
707 206.91 wind 3.0 43200 < th dose independent rect. 23 6
724 207.03 radiation 1.0 270 < th dose independent rect. 18 8
736 207.09 temperature 10.0 1440 > th dose independent rect. 3 7
739 207.09 atmosphere 995.0 1440 > th dose independent rect. 3 7
740 207.09 wind 9.0 10 < th dose independent rect. 9 17
741 207.09 temperature 10.0 1440 > th dose independent rect. 10 17
755 207.13 radiation 1.0 270 < th dose independent rect. 11 15
760 207.14 temperature 10.0 30 > th dose independent rect. 2 7
762 207.14 temperature 30.0 30 < th dose independent rect. 2 7
763 207.14 humidity 50.0 30 > th dose independent rect. 2 7
765 207.14 atmosphere 995.0 30 > th dose independent rect. 2 7
766 207.14 atmosphere 1015.0 30 < th dose independent rect. 2 7
767 207.14 temperature 10.0 30 > th dose independent rect. 9 17
772 207.15 humidity 50.0 270 > th dose independent rect. 6 8
784 207.20 wind 9.0 10 < th dose independent rect. 9 6
786 207.22 wind 3.0 43200 > th dose independent rect. 23 6
789 207.25 temperature 10.0 270 > th dose independent rect. 18 8
791 207.25 radiation 20.0 270 < th dose independent rect. 18 8
794 207.25 temperature 10.0 270 > th dose independent rect. 2 16
795 207.25 atmosphere 1015.0 270 < th dose independent rect. 2 16
802 207.25 radiation 40.0 10 < th dose dependent rect. 4 16
828 207.31 radiation 30.0 90 < th dose independent rect. 3 6
844 207.37 atmosphere 995.0 10 > th dose independent rect. 15 18
855 207.40 wind 9.0 270 < th dose independent rect. 18 8
865 207.45 wind 1.0 90 > th dose independent rect. 8 7
871 207.49 temperature 10.0 10 > th dose independent rect. 9 6
873 207.49 atmosphere 995.0 10 > th dose independent rect. 9 6
874 207.49 atmosphere 1015.0 10 < th dose independent rect. 9 6
875 207.49 precipitation 0.1 10 < th dose independent rect. 9 6
876 207.49 temperature 10.0 10 > th dose independent rect. 15 18
877 207.49 precipitation 0.1 10 < th dose dependent rect. 9 6
880 207.51 precipitation 0.1 10 < th dose independent rect. 9 17
882 207.51 precipitation 0.1 10 < th dose dependent rect. 9 17
890 207.54 temperature 30.0 10 < th dose dependent rect. 4 5
892 207.55 wind 9.0 90 < th dose independent rect. 8 19
897 207.56 atmosphere 1015.0 10 < th dose dependent rect. 4 5
924 207.61 wind 9.0 10 < th dose independent rect. 15 18
935 207.65 temperature 20.0 270 > th dose independent rect. 19 7
945 207.67 temperature 10.0 1440 > th dose independent rect. 10 6
948 207.67 temperature 10.0 1440 > th dose independent rect. 16 18
954 207.68 radiation 1.0 90 > th dose independent rect. 8 7
968 207.72 wind 9.0 30 < th dose dependent rect. 2 7
977 207.74 wind 5.0 270 < th dose independent rect. 3 2
995 207.80 atmosphere 1015.0 270 < th dose dependent rect. 1 5