Os12g0244500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0244500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.85 | 0.328 | 9.3 | -1.74 | 0.249 | 0.984 | 0.455 | -0.693 | -0.371 | 17.2 | 20.74 | 1302 | -- | -- |
| 49.89 | 0.329 | 9.28 | -1.65 | 0.239 | 1.08 | 0.537 | -- | -0.348 | 16.8 | 20.8 | 1304 | -- | -- |
| 49.35 | 0.327 | 9.3 | -1.74 | 0.248 | 0.978 | -- | -0.728 | -0.372 | 17.3 | 20.72 | 1290 | -- | -- |
| 50.44 | 0.331 | 9.28 | -1.61 | 0.248 | 1.09 | -- | -- | -0.336 | 17.5 | 20.65 | 1328 | -- | -- |
| 52.67 | 0.338 | 9.3 | -1.75 | -- | 0.971 | -- | -0.716 | -0.373 | -- | 20.7 | 1304 | -- | -- |
| 77.46 | 0.413 | 9.23 | -1.16 | 0.212 | -- | 0.677 | -- | -0.0854 | 17.5 | -- | -- | -- | -- |
| 78.44 | 0.415 | 9.23 | -1.16 | 0.222 | -- | -- | -- | -0.0829 | 18.3 | -- | -- | -- | -- |
| 53.68 | 0.341 | 9.28 | -1.62 | -- | 1.08 | -- | -- | -0.342 | -- | 20.6 | 1352 | -- | -- |
| 103.04 | 0.473 | 9.22 | -- | 0.26 | 0.497 | -- | -- | -0.0917 | 17.1 | 22.35 | 1176 | -- | -- |
| 81.01 | 0.421 | 9.22 | -1.17 | -- | -- | -- | -- | -0.0877 | -- | -- | -- | -- | -- |
| 113.91 | 0.499 | 9.2 | -- | 0.239 | -- | -- | -- | 0.0463 | 18.1 | -- | -- | -- | -- |
| 106.58 | 0.481 | 9.22 | -- | -- | 0.479 | -- | -- | -0.102 | -- | 22.3 | 1168 | -- | -- |
| 116.87 | 0.505 | 9.19 | -- | -- | -- | -- | -- | 0.0417 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.60 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 2 | 47.65 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 5 | 48.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 3 |
| 13 | 48.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 8 |
| 16 | 48.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 16 |
| 25 | 48.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 34 | 48.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 36 | 48.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 58 | 48.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 66 | 48.87 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 68 | 48.87 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 74 | 48.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 95 | 48.93 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 96 | 48.93 | temperature | 20 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 114 | 48.95 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 10 |
| 150 | 49.00 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 193 | 49.06 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 394 | 49.33 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 447 | 49.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 448 | 49.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 15 |
| 449 | 49.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 482 | 49.43 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 532 | 49.48 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 552 | 49.50 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 583 | 49.52 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 601 | 49.54 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 18 |
| 739 | 49.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 8 |
| 754 | 49.66 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 776 | 49.68 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 876 | 49.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |