Os12g0241000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Iojap-related protein family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0241000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Iojap-related protein family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.32 | 0.545 | 10.5 | -0.403 | 1.58 | 2.78 | 0.703 | -2.01 | -0.425 | 17.7 | 9.825 | 283 | 13 | 15.8 |
| 137.05 | 0.545 | 10.5 | -0.123 | 1.65 | 2.93 | 0.758 | -- | -0.422 | 17.2 | 8.096 | 369 | 12.6 | 15.7 |
| 131.74 | 0.535 | 10.5 | -0.336 | 1.83 | 3.12 | -- | -1.67 | -0.39 | 16.7 | 7.531 | 339 | 13.2 | 15.4 |
| 135.53 | 0.542 | 10.5 | -0.189 | 1.89 | 3.12 | -- | -- | -0.388 | 16.7 | 5.471 | 366 | 12.9 | 15.4 |
| 182.89 | 0.63 | 10.4 | -0.0328 | -- | 3.68 | -- | 1.21 | -0.299 | -- | 10.65 | 361 | 11 | 15.5 |
| 226.37 | 0.705 | 10.5 | 0.153 | 2.81 | -- | -0.0166 | -- | -0.145 | 20.2 | -- | -- | -- | -- |
| 226.37 | 0.705 | 10.5 | 0.154 | 2.81 | -- | -- | -- | -0.145 | 20.2 | -- | -- | -- | -- |
| 167.25 | 0.602 | 10.4 | -0.256 | -- | 3.68 | -- | -- | -0.361 | -- | 11.99 | 360 | 11.5 | 13.8 |
| 135.98 | 0.543 | 10.5 | -- | 1.87 | 3.2 | -- | -- | -0.375 | 16.5 | 4.95 | 372 | 12.8 | 15.5 |
| 660.67 | 1.2 | 10.4 | 0.132 | -- | -- | -- | -- | -0.177 | -- | -- | -- | -- | -- |
| 227 | 0.705 | 10.5 | -- | 2.81 | -- | -- | -- | -0.162 | 20.2 | -- | -- | -- | -- |
| 167.36 | 0.603 | 10.4 | -- | -- | 3.59 | -- | -- | -0.335 | -- | 11.44 | 391 | 11.1 | 13.6 |
| 661.14 | 1.2 | 10.4 | -- | -- | -- | -- | -- | -0.192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.88 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 13 | 141.48 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 9 |
| 59 | 149.51 | radiation | 1.0 | 270 | < th | dose independent | rect. | 16 | 9 |
| 60 | 149.52 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 9 |
| 65 | 150.21 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 17 |
| 97 | 152.48 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 8 |
| 98 | 152.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 99 | 152.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 20 |
| 105 | 152.63 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 117 | 153.23 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 125 | 153.76 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 128 | 153.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 14 |
| 148 | 154.53 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 161 | 155.39 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 169 | 155.52 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 180 | 155.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 181 | 155.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 196 | 156.26 | temperature | 20.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 199 | 156.27 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 200 | 156.32 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 202 | 156.33 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 218 | 156.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 223 | 156.75 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 241 | 157.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 19 |
| 242 | 157.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 19 |
| 264 | 157.43 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 7 |
| 265 | 157.44 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 266 | 157.48 | temperature | 10.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 277 | 157.62 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 290 | 157.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 7 |
| 291 | 157.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 309 | 158.34 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 311 | 158.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 317 | 158.46 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 19 |
| 318 | 158.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 319 | 158.48 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 320 | 158.48 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 321 | 158.48 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 322 | 158.48 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 327 | 158.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 345 | 158.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 348 | 158.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 350 | 158.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 351 | 158.74 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 353 | 158.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 354 | 158.74 | radiation | 40.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 355 | 158.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 356 | 158.75 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 5 |
| 365 | 158.86 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 8 |
| 367 | 158.93 | radiation | 1.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 396 | 159.39 | radiation | 1.0 | 270 | > th | dose independent | sin | 16 | NA |
| 401 | 159.46 | radiation | 1.0 | 270 | < th | dose independent | sin | 16 | NA |
| 405 | 159.51 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 8 |
| 413 | 159.59 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 475 | 160.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 476 | 160.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 477 | 160.29 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 478 | 160.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 485 | 160.34 | temperature | 10.0 | 90 | > th | dose dependent | sin | 15 | NA |
| 511 | 160.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 512 | 160.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 515 | 160.55 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 550 | 160.84 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 5 |
| 553 | 160.87 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 17 |
| 554 | 160.87 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 560 | 160.94 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 9 |
| 562 | 160.94 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 566 | 161.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 616 | 161.42 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 623 | 161.46 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 9 | 22 |
| 635 | 161.56 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 9 | 20 |
| 668 | 161.69 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 673 | 161.73 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 675 | 161.75 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 690 | 161.82 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 6 | 17 |
| 709 | 161.92 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 742 | 162.07 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 761 | 162.15 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 774 | 162.20 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 782 | 162.24 | temperature | 30.0 | 270 | < th | dose dependent | sin | 18 | NA |
| 801 | 162.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 5 |
| 802 | 162.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 5 |
| 817 | 162.48 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 17 |
| 818 | 162.48 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 17 |
| 843 | 162.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 8 |
| 844 | 162.66 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 8 |
| 845 | 162.66 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 846 | 162.66 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 854 | 162.69 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 6 |
| 874 | 162.80 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 15 | 2 |
| 890 | 162.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 16 |
| 926 | 163.05 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 19 |
| 973 | 163.39 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 987 | 163.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 999 | 163.58 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 17 |