Os12g0239900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0239900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.04 | 0.554 | 8.27 | 0.402 | 1.78 | 1.42 | 0.808 | -1.69 | 0.219 | 18.8 | 1.533 | 1358 | -- | -- |
| 141.38 | 0.554 | 8.27 | 0.264 | 1.75 | 1.61 | 0.971 | -- | 0.194 | 18.8 | 1.38 | 1374 | -- | -- |
| 140.62 | 0.552 | 8.27 | 0.386 | 1.78 | 1.4 | -- | -1.72 | 0.222 | 18.8 | 1.697 | 1356 | -- | -- |
| 143.77 | 0.558 | 8.29 | 0.223 | 1.76 | 1.62 | -- | -- | 0.188 | 18.8 | 1.248 | 1375 | -- | -- |
| 286.02 | 0.788 | 8.23 | 0.302 | -- | 1.43 | -- | -1.29 | 0.207 | -- | 1.958 | 1443 | -- | -- |
| 170.95 | 0.613 | 8.33 | -0.138 | 1.66 | -- | 0.881 | -- | -0.00883 | 18.3 | -- | -- | -- | -- |
| 172.85 | 0.616 | 8.33 | -0.148 | 1.67 | -- | -- | -- | -0.00556 | 18.3 | -- | -- | -- | -- |
| 286.65 | 0.789 | 8.25 | 0.159 | -- | 1.64 | -- | -- | 0.171 | -- | 1.62 | 1450 | -- | -- |
| 144.8 | 0.56 | 8.29 | -- | 1.74 | 1.5 | -- | -- | 0.162 | 18.8 | 1.572 | 1378 | -- | -- |
| 317.21 | 0.832 | 8.3 | -0.194 | -- | -- | -- | -- | -0.0419 | -- | -- | -- | -- | -- |
| 173.43 | 0.616 | 8.32 | -- | 1.67 | -- | -- | -- | 0.011 | 18.2 | -- | -- | -- | -- |
| 287.23 | 0.789 | 8.25 | -- | -- | 1.57 | -- | -- | 0.146 | -- | 1.69 | 1450 | -- | -- |
| 318.2 | 0.833 | 8.29 | -- | -- | -- | -- | -- | -0.0204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.81 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 2 | 134.01 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 6 |
| 5 | 134.89 | temperature | 10 | 90 | > th | dose dependent | sin | 7 | NA |
| 6 | 134.95 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 8 |
| 10 | 135.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 19 |
| 11 | 135.70 | humidity | 90 | 270 | > th | dose independent | rect. | 5 | 10 |
| 14 | 135.87 | temperature | 20 | 270 | > th | dose dependent | sin | 9 | NA |
| 18 | 136.04 | humidity | 90 | 270 | > th | dose independent | rect. | 5 | 6 |
| 25 | 136.95 | temperature | 30 | 90 | < th | dose dependent | sin | 6 | NA |
| 33 | 137.56 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 38 | 137.79 | wind | 7 | 14400 | > th | dose dependent | rect. | 20 | 20 |
| 40 | 137.85 | wind | 7 | 14400 | > th | dose dependent | rect. | 22 | 18 |
| 45 | 137.97 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 19 |
| 46 | 137.99 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 48 | 138.12 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 17 |
| 53 | 138.25 | humidity | 90 | 270 | > th | dose dependent | rect. | 5 | 11 |
| 54 | 138.26 | wind | 7 | 14400 | > th | dose independent | rect. | 23 | 17 |
| 57 | 138.27 | wind | 7 | 14400 | < th | dose independent | rect. | 3 | 13 |
| 61 | 138.31 | wind | 7 | 14400 | > th | dose independent | rect. | 2 | 14 |
| 90 | 138.60 | wind | 7 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 93 | 138.63 | wind | 7 | 14400 | > th | dose independent | sin | 2 | NA |
| 105 | 138.66 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 22 |
| 106 | 138.67 | wind | 7 | 14400 | < th | dose independent | sin | 2 | NA |
| 107 | 138.67 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 20 |
| 130 | 138.76 | wind | 7 | 14400 | > th | dose dependent | sin | 4 | NA |
| 143 | 138.82 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 15 |
| 146 | 138.83 | wind | 7 | 14400 | > th | dose dependent | rect. | 2 | 19 |
| 152 | 138.85 | wind | 7 | 14400 | > th | dose dependent | rect. | 3 | 22 |
| 164 | 138.88 | wind | 9 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 201 | 138.96 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 217 | 139.00 | wind | 7 | 14400 | > th | dose dependent | no | NA | NA |
| 228 | 139.01 | wind | 7 | 14400 | > th | dose dependent | rect. | 7 | 18 |
| 292 | 139.15 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 347 | 139.32 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 348 | 139.33 | humidity | 80 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 371 | 139.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 11 |
| 383 | 139.47 | wind | 7 | 14400 | > th | dose dependent | sin | 20 | NA |
| 416 | 139.56 | wind | 7 | 14400 | < th | dose independent | rect. | 10 | 12 |
| 423 | 139.57 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 459 | 139.66 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 20 |
| 497 | 139.75 | humidity | 90 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 502 | 139.76 | wind | 7 | 14400 | < th | dose independent | rect. | 10 | 20 |
| 779 | 140.39 | wind | 7 | 14400 | > th | dose independent | no | NA | NA |
| 781 | 140.39 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 801 | 140.45 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 834 | 140.54 | wind | 7 | 14400 | < th | dose independent | no | NA | NA |
| 851 | 140.62 | humidity | 90 | 270 | > th | dose dependent | rect. | 7 | 2 |
| 854 | 140.63 | wind | 9 | 14400 | > th | dose independent | rect. | 13 | 22 |
| 862 | 140.67 | wind | 9 | 14400 | < th | dose independent | sin | 7 | NA |
| 884 | 140.73 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 17 |
| 889 | 140.74 | wind | 9 | 14400 | > th | dose independent | sin | 7 | NA |
| 893 | 140.75 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 12 |
| 914 | 140.87 | humidity | 90 | 720 | < th | dose independent | rect. | 8 | 4 |
| 926 | 140.93 | radiation | 1 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 930 | 140.95 | radiation | 1 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 934 | 140.96 | wind | 1 | 43200 | < th | dose dependent | sin | 16 | NA |
| 970 | 141.06 | humidity | 90 | 720 | > th | dose independent | rect. | 5 | 19 |