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Os12g0226900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Allyl alcohol dehydrogenase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.0345) R2 : 0.827
β1 : -1.71 (0.126) R2dD : 0.0719 R2D : -0.0107
β2 : 3.66 (0.0919) R2dC : 0.629 R2C : 0.467
β3 : -2.97 (0.242) R2dE : 0.0619 R2E : -0.0855
β4 : 3.28 (0.413) R2dD*C : 0.0238 R2D*C : -0.0104
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.72 (0.0747) R2dN8 : 0.28 R2N8 : 0.11
σ : 0.644
deviance : 191.19
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_____
C
peak time of C : 5.98
E
wheather : humidity
threshold : 93.6
memory length : 503
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 13.3
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
189.62 0.647 13.9 -1.75 3.64 -3.09 3.02 1.76 -1.73 5.99 93.6 497 13.4 --
191.19 0.644 13.9 -1.71 3.66 -2.97 3.28 -- -1.72 5.98 93.6 503 13.3 --
209.64 0.674 13.9 -1.78 3.62 -3.11 -- 2.95 -1.74 5.94 93.7 490 13.5 --
215.31 0.683 13.9 -1.7 3.68 -3.22 -- -- -1.74 5.87 93.85 463 13.1 --
872.05 1.38 13.9 -1.72 -- -1.83 -- 2.52 -1.55 -- 93.58 354 13.9 --
252.41 0.745 13.9 -1.8 3.41 -- 3.36 -- -1.56 6.15 -- -- -- --
279.17 0.782 13.9 -1.77 3.43 -- -- -- -1.58 6.01 -- -- -- --
288.62 0.791 13.9 -1.65 -- -4.02 -- -- -1.5 -- -52.81 121 13.2 --
290.31 0.794 13.9 -- 3.68 -3.24 -- -- -1.57 5.89 93.59 496 13.3 --
890.64 1.39 13.9 -1.67 -- -- -- -- -1.5 -- -- -- -- --
361.85 0.89 13.8 -- 3.41 -- -- -- -1.38 6.04 -- -- -- --
360.77 0.885 13.9 -- -- -3.55 -- -- -1.39 -- -554.4 418 15.4 --
964.3 1.45 13.9 -- -- -- -- -- -1.31 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 197.95 humidity 90.0 720 > th dose dependent rect. 19 5
4 199.18 humidity 60.0 720 > th dose dependent rect. 19 5
23 201.84 radiation 1.0 720 < th dose dependent rect. 5 19
31 202.74 humidity 90.0 720 > th dose dependent rect. 9 15
40 203.33 humidity 90.0 720 > th dose independent rect. 20 4
62 204.38 precipitation 0.1 270 < th dose independent rect. 15 20
63 204.38 precipitation 0.1 270 < th dose dependent rect. 15 20
71 204.64 humidity 50.0 720 > th dose dependent rect. 18 14
73 204.72 humidity 80.0 720 < th dose independent rect. 16 4
84 205.15 precipitation 0.1 4320 < th dose independent rect. 12 2
85 205.15 precipitation 0.1 4320 < th dose dependent rect. 12 2
88 205.17 humidity 90.0 720 < th dose dependent rect. 16 9
106 205.70 radiation 1.0 1440 < th dose dependent rect. 7 10
116 205.95 precipitation 0.1 4320 > th dose dependent rect. 13 1
119 206.01 precipitation 0.1 4320 > th dose independent rect. 13 1
128 206.18 humidity 90.0 720 < th dose independent rect. 17 7
151 206.72 atmosphere 995.0 270 > th dose dependent rect. 11 4
158 206.80 precipitation 0.1 720 < th dose independent rect. 15 14
159 206.80 precipitation 0.1 720 < th dose dependent rect. 15 14
164 206.87 precipitation 0.1 4320 > th dose dependent rect. 9 5
172 207.02 humidity 60.0 720 > th dose dependent rect. 14 18
179 207.14 precipitation 0.1 43200 > th dose dependent rect. 19 1
186 207.27 wind 7.0 270 < th dose independent rect. 11 4
227 207.97 atmosphere 1000.0 270 > th dose independent rect. 11 4
239 208.08 precipitation 0.1 4320 < th dose independent rect. 9 5
240 208.08 precipitation 0.1 4320 < th dose dependent rect. 9 5
253 208.27 wind 1.0 270 > th dose independent rect. 15 20
257 208.36 humidity 80.0 720 > th dose independent rect. 10 14
267 208.54 precipitation 0.1 720 < th dose independent rect. 17 18
268 208.54 precipitation 0.1 720 < th dose dependent rect. 17 18
282 208.73 humidity 90.0 720 > th dose dependent sin 19 NA
286 208.78 precipitation 0.1 43200 < th dose independent rect. 19 1
288 208.78 precipitation 0.1 43200 < th dose dependent rect. 19 1
297 208.85 humidity 60.0 720 > th dose dependent sin 16 NA
303 208.90 temperature 10.0 270 > th dose independent rect. 11 4
304 208.90 atmosphere 1015.0 270 < th dose independent rect. 11 4
305 208.90 temperature 10.0 270 > th dose independent rect. 15 20
311 209.00 humidity 90.0 90 < th dose independent rect. 17 9
317 209.04 precipitation 0.1 270 < th dose independent rect. 11 4
318 209.04 radiation 40.0 270 < th dose independent rect. 15 20
319 209.04 precipitation 0.1 270 < th dose dependent rect. 11 4
328 209.16 temperature 10.0 270 > th dose dependent rect. 15 19
336 209.31 precipitation 0.1 43200 > th dose independent rect. 19 1
337 209.31 precipitation 0.1 720 < th dose independent rect. 23 21
341 209.31 precipitation 0.1 720 < th dose dependent rect. 23 21
439 210.12 humidity 80.0 1440 > th dose independent rect. 9 12
448 210.23 precipitation 0.1 720 < th dose independent rect. 1 19
449 210.23 precipitation 0.1 720 < th dose dependent rect. 1 19
451 210.25 precipitation 0.1 4320 > th dose independent rect. 9 5
461 210.30 radiation 1.0 720 < th dose independent rect. 5 19
467 210.36 wind 1.0 270 > th dose independent rect. 11 4
470 210.37 humidity 90.0 720 < th dose dependent sin 14 NA
501 210.62 humidity 80.0 1440 < th dose independent rect. 9 12
512 210.70 humidity 80.0 1440 < th dose independent sin 22 NA
514 210.71 humidity 90.0 90 < th dose independent rect. 17 12
520 210.72 wind 9.0 270 < th dose independent rect. 15 20
521 210.72 precipitation 0.1 720 < th dose independent rect. 7 22
524 210.72 precipitation 0.1 720 < th dose dependent rect. 7 22
526 210.74 humidity 80.0 1440 > th dose independent sin 22 NA
536 210.83 precipitation 0.1 720 < th dose independent rect. 8 20
537 210.83 precipitation 0.1 720 < th dose dependent rect. 8 20
545 210.93 humidity 50.0 270 > th dose independent rect. 11 4
548 210.95 radiation 40.0 90 < th dose independent rect. 17 20
549 210.95 humidity 90.0 30 < th dose independent rect. 17 21
577 211.09 humidity 80.0 1440 < th dose independent rect. 7 14
578 211.10 humidity 80.0 14400 > th dose independent rect. 15 1
595 211.17 humidity 80.0 1440 < th dose independent rect. 10 5
619 211.28 humidity 80.0 1440 > th dose independent rect. 6 15
634 211.33 radiation 1.0 4320 < th dose dependent rect. 16 1
643 211.39 humidity 80.0 1440 > th dose independent rect. 10 5
661 211.50 radiation 1.0 1440 < th dose dependent rect. 6 13
685 211.62 radiation 1.0 1440 > th dose independent rect. 7 10
687 211.63 humidity 80.0 1440 < th dose independent rect. 11 3
688 211.63 radiation 1.0 1440 < th dose independent rect. 7 10
715 211.71 precipitation 0.1 4320 < th dose independent rect. 19 2
716 211.71 precipitation 0.1 4320 < th dose dependent rect. 19 2
730 211.76 humidity 90.0 30 < th dose independent rect. 17 19
773 211.88 precipitation 0.1 4320 > th dose independent rect. 19 2
816 212.03 radiation 1.0 1440 < th dose dependent sin 0 NA
822 212.05 precipitation 0.1 270 < th dose independent rect. 15 7
827 212.05 precipitation 0.1 270 < th dose dependent rect. 15 7
845 212.12 precipitation 0.1 4320 > th dose dependent rect. 19 5
883 212.27 temperature 30.0 270 < th dose independent rect. 11 4
899 212.32 humidity 90.0 4320 < th dose independent rect. 13 1
902 212.34 precipitation 0.1 720 < th dose independent rect. 17 10
906 212.34 precipitation 0.1 720 < th dose dependent rect. 17 10
913 212.36 wind 9.0 270 < th dose independent rect. 22 17
929 212.42 humidity 60.0 720 > th dose dependent rect. 18 21
934 212.45 radiation 1.0 270 > th dose independent rect. 11 4
952 212.49 humidity 90.0 270 < th dose independent rect. 11 4