Os12g0226700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Allyl alcohol dehydrogenase.
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Os12g0226700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Allyl alcohol dehydrogenase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.18 | 0.675 | 11.2 | 1.72 | 6.01 | 3.6 | 1.31 | -0.00176 | 0.692 | 8.77 | 28.5 | 83 | 5.27 | -- |
| 205.93 | 0.668 | 11.2 | 1.72 | 6.06 | 3.6 | 1.33 | -- | 0.688 | 8.73 | 28.3 | 92 | 5.64 | -- |
| 210.03 | 0.675 | 11.2 | 1.88 | 6.08 | 3.69 | -- | -0.764 | 0.734 | 8.71 | 28.14 | 92 | 5.83 | -- |
| 210.85 | 0.676 | 11.2 | 1.85 | 6.17 | 3.75 | -- | -- | 0.712 | 8.64 | 27.89 | 120 | 6.62 | -- |
| 393.21 | 0.924 | 11.4 | 1.88 | -- | 6.35 | -- | -1.96 | 0.494 | -- | 46.82 | 659 | 4.07 | -- |
| 291.56 | 0.8 | 11.3 | 1.32 | 5.8 | -- | 1.82 | -- | 0.265 | 7.76 | -- | -- | -- | -- |
| 300.99 | 0.812 | 11.3 | 1.36 | 5.8 | -- | -- | -- | 0.262 | 7.74 | -- | -- | -- | -- |
| 283.01 | 0.784 | 11.4 | 1.52 | -- | 6.42 | -- | -- | 0.398 | -- | 104.6 | 776 | 4.79 | -- |
| 289.76 | 0.793 | 11.2 | -- | 6.01 | 2.84 | -- | -- | 0.441 | 8.38 | 27.6 | 116 | 6.42 | -- |
| 2116.84 | 2.15 | 11.4 | 1.44 | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
| 349.94 | 0.875 | 11.3 | -- | 5.81 | -- | -- | -- | 0.11 | 7.73 | -- | -- | -- | -- |
| 345.36 | 0.866 | 11.5 | -- | -- | 6.19 | -- | -- | 0.202 | -- | 232.5 | 892 | 5.74 | -- |
| 2171.21 | 2.17 | 11.5 | -- | -- | -- | -- | -- | 0.186 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 192.72 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 9 |
| 2 | 192.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 11 |
| 5 | 194.99 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 17 |
| 7 | 195.63 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 24 | 199.24 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 9 |
| 51 | 203.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 55 | 204.40 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 18 |
| 79 | 206.87 | temperature | 30 | 90 | < th | dose dependent | sin | 11 | NA |
| 80 | 206.94 | temperature | 30 | 10 | < th | dose dependent | sin | 10 | NA |
| 95 | 207.90 | temperature | 30 | 270 | < th | dose dependent | sin | 14 | NA |
| 108 | 208.45 | temperature | 10 | 10 | > th | dose dependent | sin | 10 | NA |
| 190 | 212.79 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 17 |
| 418 | 219.02 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 12 |
| 489 | 220.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 8 |
| 648 | 223.78 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 14 |
| 666 | 224.19 | temperature | 25 | 270 | < th | dose independent | rect. | 11 | 17 |
| 678 | 224.45 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 730 | 225.17 | temperature | 25 | 270 | < th | dose independent | rect. | 18 | 10 |
| 877 | 227.15 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 10 | 18 |
| 903 | 227.55 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 991 | 229.00 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 9 |