Os12g0226400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Quinone oxidoreductase-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os12g0226400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Quinone oxidoreductase-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 444.98 | 0.991 | 4.64 | -3.79 | 1.28 | -0.823 | -2.58 | 0.208 | -1.39 | 4.46 | 1.101 | 15 | -- | -- |
| 445.02 | 0.983 | 4.63 | -3.79 | 1.29 | -0.808 | -2.61 | -- | -1.39 | 4.46 | 1.11 | 14 | -- | -- |
| 462.01 | 1 | 4.64 | -3.81 | 1.27 | -0.833 | -- | 1.12 | -1.39 | 4.43 | 1.174 | 13 | -- | -- |
| 463.23 | 1 | 4.62 | -3.76 | 1.29 | -0.752 | -- | -- | -1.38 | 4.45 | 1.152 | 12 | -- | -- |
| 521.69 | 1.06 | 4.66 | -4.06 | -- | -1.21 | -- | 1.65 | -1.26 | -- | 1.8 | 13 | -- | -- |
| 461.65 | 1.01 | 4.63 | -3.68 | 1.54 | -- | -2.46 | -- | -1.41 | 4.45 | -- | -- | -- | -- |
| 477.98 | 1.02 | 4.63 | -3.66 | 1.52 | -- | -- | -- | -1.4 | 4.42 | -- | -- | -- | -- |
| 516.51 | 1.06 | 4.64 | -4.03 | -- | -1.31 | -- | -- | -1.33 | -- | 2 | 97 | -- | -- |
| 829.6 | 1.35 | 4.53 | -- | 1.37 | -0.25 | -- | -- | -0.974 | 4.5 | 1.2 | 12 | -- | -- |
| 602.42 | 1.15 | 4.64 | -3.6 | -- | -- | -- | -- | -1.36 | -- | -- | -- | -- | -- |
| 831.89 | 1.35 | 4.53 | -- | 1.45 | -- | -- | -- | -0.988 | 4.48 | -- | -- | -- | -- |
| 914.07 | 1.41 | 4.54 | -- | -- | -0.846 | -- | -- | -0.917 | -- | 1.2 | 12 | -- | -- |
| 945.15 | 1.43 | 4.55 | -- | -- | -- | -- | -- | -0.956 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 433.74 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 8 |
| 3 | 433.92 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 3 |
| 4 | 433.94 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 13 | 434.28 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 27 | 437.06 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 19 | 12 |
| 28 | 437.07 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 39 | 437.92 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 18 | 14 |
| 152 | 441.68 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 9 |
| 169 | 441.93 | wind | 1.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 182 | 441.97 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 7 |
| 184 | 441.99 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 198 | 442.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 4 |
| 206 | 442.06 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 222 | 442.07 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 234 | 442.31 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 8 |
| 235 | 442.32 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 256 | 442.56 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 304 | 443.11 | wind | 1.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 357 | 443.55 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 438 | 444.24 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 468 | 444.50 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 469 | 444.50 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 487 | 444.66 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 17 | 18 |
| 490 | 444.70 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 533 | 444.90 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 15 |
| 537 | 444.92 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 538 | 444.92 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 559 | 445.05 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 565 | 445.07 | atmosphere | 1005.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 582 | 445.17 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 590 | 445.23 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 16 | 11 |
| 597 | 445.26 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 606 | 445.31 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 2 |
| 622 | 445.41 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 20 |
| 628 | 445.48 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 630 | 445.48 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 633 | 445.48 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 637 | 445.48 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 646 | 445.48 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 647 | 445.48 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 648 | 445.48 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 658 | 445.48 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 683 | 445.56 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 684 | 445.57 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 11 | 7 |
| 703 | 445.66 | wind | 1.0 | 90 | > th | dose independent | rect. | 3 | 23 |
| 704 | 445.67 | atmosphere | 1005.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 724 | 445.75 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 729 | 445.76 | wind | 1.0 | 90 | < th | dose independent | rect. | 2 | 4 |
| 753 | 445.81 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 8 |
| 758 | 445.84 | humidity | 70.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 807 | 445.99 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 5 |
| 857 | 446.07 | temperature | 20.0 | 720 | < th | dose independent | rect. | 17 | 6 |
| 859 | 446.07 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 876 | 446.14 | temperature | 25.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 891 | 446.18 | wind | 1.0 | 30 | > th | dose independent | sin | 8 | NA |
| 896 | 446.19 | atmosphere | 1005.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 897 | 446.19 | wind | 1.0 | 10 | > th | dose independent | rect. | 17 | 21 |
| 898 | 446.19 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 23 |
| 917 | 446.29 | wind | 3.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 929 | 446.32 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 941 | 446.37 | humidity | 60.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 967 | 446.39 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 21 | 4 |