Os12g0210800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 3-deoxy-D-manno-2-octulosonic acid-8-phosphate (EC 4.1.2.16) (Fragment).
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Os12g0210800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 3-deoxy-D-manno-2-octulosonic acid-8-phosphate (EC 4.1.2.16) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.98 | 0.301 | 10.1 | -1.22 | 1.42 | 0.855 | 0.509 | 0.701 | -0.198 | 20.8 | 82.67 | 1271 | -- | -- |
| 41.6 | 0.3 | 10.1 | -1.28 | 1.41 | 0.904 | 0.581 | -- | -0.216 | 20.8 | 81.94 | 1265 | -- | -- |
| 41.7 | 0.301 | 10.1 | -1.23 | 1.4 | 0.874 | -- | 0.845 | -0.197 | 20.7 | 82.42 | 1224 | -- | -- |
| 42.61 | 0.304 | 10.1 | -1.3 | 1.39 | 0.944 | -- | -- | -0.196 | 20.7 | 82 | 1232 | -- | -- |
| 87.75 | 0.436 | 10 | -1.19 | -- | 1.94 | -- | -0.134 | -0.225 | -- | 109.2 | 794 | -- | -- |
| 60.2 | 0.364 | 10.1 | -1.14 | 1.48 | -- | 0.722 | -- | -0.232 | 21.2 | -- | -- | -- | -- |
| 62.02 | 0.369 | 10.1 | -1.16 | 1.48 | -- | -- | -- | -0.233 | 21.2 | -- | -- | -- | -- |
| 86.58 | 0.433 | 10 | -1.26 | -- | 2.02 | -- | -- | -0.272 | -- | 180.7 | 781 | -- | -- |
| 83.58 | 0.426 | 10.1 | -- | 1.49 | 0.796 | -- | -- | -0.155 | 20.9 | 148 | 1369 | -- | -- |
| 188.59 | 0.642 | 10 | -1.16 | -- | -- | -- | -- | -0.24 | -- | -- | -- | -- | -- |
| 97.65 | 0.462 | 10.1 | -- | 1.48 | -- | -- | -- | -0.103 | 21.1 | -- | -- | -- | -- |
| 128.31 | 0.528 | 10 | -- | -- | 1.96 | -- | -- | -0.131 | -- | 142.5 | 770 | -- | -- |
| 223.97 | 0.699 | 10 | -- | -- | -- | -- | -- | -0.112 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.36 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 15 |
| 3 | 40.38 | humidity | 80 | 1440 | < th | dose dependent | sin | 14 | NA |
| 91 | 41.65 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 119 | 41.84 | humidity | 50 | 1440 | > th | dose dependent | sin | 19 | NA |
| 121 | 41.84 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 206 | 42.14 | humidity | 70 | 1440 | > th | dose independent | sin | 15 | NA |
| 233 | 42.21 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 20 |
| 248 | 42.26 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 268 | 42.28 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 270 | 42.28 | humidity | 80 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 271 | 42.29 | humidity | 70 | 1440 | < th | dose independent | sin | 15 | NA |
| 520 | 42.65 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 6 |
| 559 | 42.67 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 13 |
| 568 | 42.68 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 11 |
| 589 | 42.70 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 6 |
| 670 | 42.83 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 696 | 42.85 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 897 | 43.11 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 19 |
| 941 | 43.17 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 980 | 43.25 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 984 | 43.26 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 9 |