Os12g0203100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0203100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.66 | 0.219 | 11.8 | -1.41 | 0.559 | -0.955 | 0.467 | 0.0354 | -0.179 | 5.28 | 29.67 | 11 | -- | -- |
| 21.63 | 0.218 | 11.8 | -1.4 | 0.554 | -0.95 | 0.469 | -- | -0.174 | 5.26 | 29.67 | 11 | -- | -- |
| 22.12 | 0.221 | 11.8 | -1.43 | 0.554 | -0.944 | -- | 0.197 | -0.184 | 5.21 | 29.67 | 11 | -- | -- |
| 22.18 | 0.221 | 11.8 | -1.4 | 0.556 | -0.946 | -- | -- | -0.176 | 5.2 | 29.67 | 11 | -- | -- |
| 35.65 | 0.28 | 11.8 | -1.36 | -- | -0.599 | -- | 0.367 | -0.113 | -- | 29.67 | 11 | -- | -- |
| 34.14 | 0.274 | 11.8 | -1.18 | 0.403 | -- | 0.376 | -- | 0.0119 | 7.52 | -- | -- | -- | -- |
| 34.54 | 0.275 | 11.8 | -1.17 | 0.404 | -- | -- | -- | 0.0113 | 7.52 | -- | -- | -- | -- |
| 33.35 | 0.269 | 11.8 | -1.34 | -- | -0.758 | -- | -- | -0.114 | -- | 24.62 | 2 | -- | -- |
| 68.79 | 0.388 | 11.8 | -- | 0.426 | -0.373 | -- | -- | 0.0783 | 6.59 | 29.67 | 11 | -- | -- |
| 43.26 | 0.307 | 11.8 | -1.17 | -- | -- | -- | -- | 0.0176 | -- | -- | -- | -- | -- |
| 70.92 | 0.394 | 11.7 | -- | 0.394 | -- | -- | -- | 0.142 | 7.72 | -- | -- | -- | -- |
| 77.24 | 0.411 | 11.8 | -- | -- | -0.328 | -- | -- | 0.0909 | -- | 25.2 | 2 | -- | -- |
| 79.29 | 0.416 | 11.8 | -- | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 2 | 21.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 3 | 21.62 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 4 | 21.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 7 | 21.68 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 8 | 21.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 11 | 21.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 15 | 21.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 21 |
| 17 | 21.92 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 23 | 22.02 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 30 | 22.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 32 | 22.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 54 | 22.31 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 58 | 22.34 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 61 | 22.36 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 67 | 22.38 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 76 | 22.41 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 90 | 22.45 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 96 | 22.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 101 | 22.46 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 108 | 22.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 118 | 22.49 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 126 | 22.50 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 133 | 22.51 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 153 | 22.52 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 200 | 22.57 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 203 | 22.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 284 | 22.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 287 | 22.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 290 | 22.62 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 9 |
| 342 | 22.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 351 | 22.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 17 |
| 381 | 22.65 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 572 | 22.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 6 |
| 610 | 22.71 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 612 | 22.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 649 | 22.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 745 | 22.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 779 | 22.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 6 |
| 838 | 22.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 891 | 22.79 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 945 | 22.82 | temperature | 10 | 1440 | > th | dose dependent | sin | 15 | NA |