Os12g0202800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 0-methyltransferase (EC 2.1.1.6) (Fragment).
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Os12g0202800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 0-methyltransferase (EC 2.1.1.6) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 151.84 | 0.579 | 6.92 | -1.44 | 1.27 | -1.92 | 1.26 | 3.77 | 0.553 | 1.98 | 35.5 | 943 | -- | -- |
| 160.85 | 0.591 | 6.84 | -0.738 | 1.29 | -1.81 | 0.54 | -- | 0.733 | 1.43 | 82.2 | 1181 | -- | -- |
| 155.83 | 0.581 | 6.91 | -1.35 | 1.32 | -1.81 | -- | 2.76 | 0.575 | 1.27 | 103.5 | 1223 | -- | -- |
| 162.11 | 0.593 | 6.84 | -0.764 | 1.32 | -1.79 | -- | -- | 0.728 | 1.26 | 86.69 | 1223 | -- | -- |
| 245.63 | 0.73 | 6.91 | -1.44 | -- | -2.55 | -- | 2.72 | 0.506 | -- | 120.7 | 1023 | -- | -- |
| 212.31 | 0.683 | 6.76 | -0.202 | 1.52 | -- | 0.656 | -- | 1.05 | 1.33 | -- | -- | -- | -- |
| 214.05 | 0.685 | 6.77 | -0.224 | 1.52 | -- | -- | -- | 1.05 | 1.28 | -- | -- | -- | -- |
| 251.88 | 0.739 | 6.84 | -0.895 | -- | -2.51 | -- | -- | 0.651 | -- | 139.3 | 1036 | -- | -- |
| 175.49 | 0.617 | 6.81 | -- | 1.33 | -1.47 | -- | -- | 0.86 | 1.28 | 110.8 | 1195 | -- | -- |
| 356.45 | 0.882 | 6.75 | -0.165 | -- | -- | -- | -- | 1.08 | -- | -- | -- | -- | -- |
| 215.38 | 0.687 | 6.76 | -- | 1.51 | -- | -- | -- | 1.07 | 1.28 | -- | -- | -- | -- |
| 270.46 | 0.766 | 6.81 | -- | -- | -2.15 | -- | -- | 0.801 | -- | 109.3 | 1026 | -- | -- |
| 357.17 | 0.882 | 6.74 | -- | -- | -- | -- | -- | 1.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.93 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 13 | 144.95 | radiation | 20 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 14 | 144.97 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 21 | 147.00 | temperature | 15 | 720 | > th | dose dependent | sin | 16 | NA |
| 25 | 147.31 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 19 |
| 27 | 147.53 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 35 | 147.78 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |
| 36 | 147.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 56 | 148.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 17 |
| 76 | 149.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 79 | 149.55 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 86 | 149.66 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 88 | 149.70 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 89 | 149.75 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 8 |
| 101 | 149.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 20 |
| 107 | 149.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 12 |
| 113 | 150.00 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 120 | 150.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 14 |
| 128 | 150.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 21 |
| 156 | 150.46 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 157 | 150.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 168 | 150.54 | wind | 5 | 43200 | > th | dose dependent | sin | 18 | NA |
| 171 | 150.55 | temperature | 10 | 1440 | > th | dose dependent | rect. | 14 | 9 |
| 195 | 150.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 197 | 150.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 15 |
| 230 | 150.81 | wind | 5 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 266 | 150.97 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 343 | 151.19 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 358 | 151.24 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 16 |
| 374 | 151.30 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 400 | 151.39 | wind | 5 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 431 | 151.51 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 11 |
| 451 | 151.58 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 10 |
| 496 | 151.76 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 18 |
| 500 | 151.77 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 501 | 151.77 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 510 | 151.80 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 15 |
| 515 | 151.81 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 533 | 151.87 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 549 | 151.91 | wind | 5 | 43200 | > th | dose independent | sin | 17 | NA |
| 573 | 151.97 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 16 |
| 616 | 152.09 | wind | 7 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 648 | 152.18 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 672 | 152.28 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 734 | 152.46 | wind | 7 | 43200 | < th | dose independent | sin | 17 | NA |
| 737 | 152.46 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 18 |
| 773 | 152.54 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 15 |
| 788 | 152.58 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 18 |
| 790 | 152.58 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 823 | 152.65 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 837 | 152.67 | wind | 7 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 882 | 152.73 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 20 |
| 912 | 152.80 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 923 | 152.82 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 943 | 152.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 969 | 152.90 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 999 | 152.95 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 22 |