BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0202800 Os12g0202800|Os12g0202800
(128 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G54160.1 | chr5:21982075-21984167 FORWARD LENGTH=364 112 4e-26
AT1G33030.1 | chr1:11964885-11966212 REVERSE LENGTH=353 110 2e-25
AT1G51990.1 | chr1:19330949-19332667 FORWARD LENGTH=364 107 2e-24
AT3G53140.1 | chr3:19695692-19697355 FORWARD LENGTH=360 105 7e-24
AT1G21130.1 | chr1:7399170-7400470 REVERSE LENGTH=374 102 6e-23
AT1G21100.1 | chr1:7386991-7388318 REVERSE LENGTH=374 102 7e-23
AT1G62900.1 | chr1:23297792-23298536 FORWARD LENGTH=206 101 9e-23
AT1G63140.2 | chr1:23417517-23418875 FORWARD LENGTH=382 101 1e-22
AT1G77520.1 | chr1:29130557-29132007 FORWARD LENGTH=382 99 4e-22
AT1G21110.1 | chr1:7390110-7391419 REVERSE LENGTH=374 99 4e-22
AT1G21120.1 | chr1:7395331-7396640 REVERSE LENGTH=374 99 6e-22
AT1G76790.1 | chr1:28822355-28823630 REVERSE LENGTH=368 97 2e-21
AT1G77530.1 | chr1:29136037-29137423 FORWARD LENGTH=382 93 5e-20
AT5G37170.1 | chr5:14712811-14714303 FORWARD LENGTH=335 90 3e-19
AT4G35150.1 | chr4:16726948-16728531 REVERSE LENGTH=326 89 8e-19
AT5G53810.1 | chr5:21850329-21852762 REVERSE LENGTH=379 86 7e-18
AT4G35160.1 | chr4:16730989-16732808 REVERSE LENGTH=383 84 2e-17
>AT5G54160.1 | chr5:21982075-21984167 FORWARD LENGTH=364
Length = 363
Score = 112 bits (281), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLPETP 64
+EH+ G+M+ SVP GDAI ++W+ +SDE C+K LKNC+++LP+ GKVI+ + +LPETP
Sbjct: 243 IEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETP 302
Query: 65 NTSPAARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFTG 106
++S + + +D IM GK+RTE+EF LAK +GF G
Sbjct: 303 DSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKG 344
>AT1G33030.1 | chr1:11964885-11966212 REVERSE LENGTH=353
Length = 352
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLPETP 64
+EH+AG+M+ + P G+AI ++WML + D+ C+KIL NC+Q+LP GKVI+VD ++PE P
Sbjct: 232 IEHVAGDMFTNTPKGEAIFMKWMLHSWDDDHCVKILSNCYQSLPSNGKVIVVDMVIPEFP 291
Query: 65 NTSPAARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFTGTFRSTYIFLNFYALEFNK 124
+ R F ++ M + GK+RT++EF LA+ AGF+ + + L F LEF+K
Sbjct: 292 GDTLLDRSLFQFELFMMNMNPSGKERTKKEFEILARLAGFSNV-QVPFTSLCFSVLEFHK 350
Query: 125 Q 125
Sbjct: 351 N 351
>AT1G51990.1 | chr1:19330949-19332667 FORWARD LENGTH=364
Length = 363
Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLP-ET 63
VEHI G+M++ +P G+ IL++W+L ++DE C++ILKNC +ALP+ G++I+++ ++P E
Sbjct: 243 VEHIGGDMFDEIPRGEVILMKWILHDWNDEKCVEILKNCKKALPETGRIIVIEMIVPREV 302
Query: 64 PNTSPAARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGF 104
T A ++S + D+ M L GK+RT++EF LAKEAGF
Sbjct: 303 SETDLATKNSLSADLTMMSLTSGGKERTKKEFEDLAKEAGF 343
>AT3G53140.1 | chr3:19695692-19697355 FORWARD LENGTH=360
Length = 359
Score = 105 bits (261), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLPETP 64
V H+ G+M++SVP+ DAI ++W+L ++DE+C +I+KNC+ ALP GGK+I + +LP+
Sbjct: 240 VTHVGGDMFQSVPSADAIFMKWVLTTWTDEECKQIMKNCYNALPVGGKLIACEPVLPKET 299
Query: 65 NTSPAARDSFTMDMIMFVLFKV-GKQRTEQEFAKLAKEAGFTGTFRSTYIFLNFYALEFN 123
+ S R D+ + +++ GK RTE+EF +L AGF TFR YI + LEF
Sbjct: 300 DESHRTRALLEGDIFVMTIYRTKGKHRTEEEFIELGLSAGFP-TFRPFYIDYFYTILEFQ 358
Query: 124 K 124
K
Sbjct: 359 K 359
>AT1G21130.1 | chr1:7399170-7400470 REVERSE LENGTH=374
Length = 373
Score = 102 bits (254), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLP-ET 63
VEH+AG+M+ VP GDA++L+ +L ++DEDC+KILKNC ++LP+ GKV++++ + P E
Sbjct: 254 VEHVAGDMFVDVPTGDAMILKRILHDWTDEDCVKILKNCWKSLPESGKVVVIELVTPDEA 313
Query: 64 PNTSPAARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFT 105
N A +F MDM+MF GK+R+ EF LA +GFT
Sbjct: 314 ENGDINANIAFDMDMLMFTQCSGGKERSRAEFEALAAASGFT 355
>AT1G21100.1 | chr1:7386991-7388318 REVERSE LENGTH=374
Length = 373
Score = 102 bits (253), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLP-ET 63
VEH+AG+M+ VP GDA++L+ +L ++DEDC+KILKNC ++LP+ GKV++++ + P E
Sbjct: 254 VEHVAGDMFVDVPTGDAMILKRILHDWTDEDCVKILKNCWKSLPENGKVVVIELVTPDEA 313
Query: 64 PNTSPAARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFT 105
N A +F MDM+MF GK+R+ EF LA +GFT
Sbjct: 314 ENGDINANIAFDMDMLMFTQCSGGKERSRAEFEALAAASGFT 355
>AT1G62900.1 | chr1:23297792-23298536 FORWARD LENGTH=206
Length = 205
Score = 101 bits (252), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLPETP 64
VEH++G+M++ +P GDAI ++W+L ++DEDC+KILKN ++LP+ GKVIIV+ + PE P
Sbjct: 86 VEHVSGDMFKEIPKGDAIFMKWILHDWTDEDCVKILKNYWKSLPEKGKVIIVEVVTPEEP 145
Query: 65 NTSPAARD-SFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGF 104
+ + + F MDM+M + GK+R+ +F LA ++GF
Sbjct: 146 KINDISSNIVFGMDMLMLAVSSGGKERSLSQFETLASDSGF 186
>AT1G63140.2 | chr1:23417517-23418875 FORWARD LENGTH=382
Length = 381
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLPETP 64
VEH++G+M++ +P GDAI ++W+L ++DEDC+KILKN ++LP+ GKVIIV+ + PE P
Sbjct: 262 VEHVSGDMFKEIPKGDAIFMKWILHDWTDEDCVKILKNYWKSLPEKGKVIIVEVVTPEEP 321
Query: 65 NTSPAARD-SFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGF 104
+ + + F MDM+M + GK+R+ +F LA ++GF
Sbjct: 322 KINDISSNIVFGMDMLMLAVSSGGKERSLSQFETLASDSGF 362
>AT1G77520.1 | chr1:29130557-29132007 FORWARD LENGTH=382
Length = 381
Score = 99.4 bits (246), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 79/123 (64%), Gaps = 6/123 (4%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLPETP 64
VEH++G+M+ VP GDA+ ++W+L + DEDCIKILKNC ++LP+ GK+IIV+ + P+ P
Sbjct: 262 VEHVSGDMFVEVPKGDAVFMKWILHDWGDEDCIKILKNCWKSLPEKGKIIIVEFVTPKEP 321
Query: 65 NTSPAARDS-FTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFTGTFRSTYIFL--NFYALE 121
+ ++ F MD++M GK+R+ +F LA +GF R I L ++ +E
Sbjct: 322 KGGDLSSNTVFAMDLLMLTQCSGGKERSLSQFENLAFASGF---LRCEIICLAYSYSVIE 378
Query: 122 FNK 124
F+K
Sbjct: 379 FHK 381
>AT1G21110.1 | chr1:7390110-7391419 REVERSE LENGTH=374
Length = 373
Score = 99.4 bits (246), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLP-ET 63
VEH+AG+M+ VP G+A++L+ +L ++DEDC+KILKNC ++LP+ GKV++++ + P E
Sbjct: 254 VEHVAGDMFVDVPTGNAMILKRILHDWTDEDCVKILKNCWKSLPQNGKVVVIELVTPDEA 313
Query: 64 PNTSPAARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFT 105
N A +F MDM+MF GK+R+ EF LA +GF+
Sbjct: 314 ENGDINANIAFDMDMLMFTQCSGGKERSRAEFEALAAASGFS 355
>AT1G21120.1 | chr1:7395331-7396640 REVERSE LENGTH=374
Length = 373
Score = 99.0 bits (245), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLP-ET 63
VEH+AG+M+ VP GDA++L+ +L ++DEDC+KILKNC ++LP+ GKV++++ + P E
Sbjct: 254 VEHVAGDMFVDVPTGDAMILKRILHDWTDEDCVKILKNCWKSLPENGKVVVIELVTPDEA 313
Query: 64 PNTSPAARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFT 105
N A +F MDM+MF GK+R+ EF LA + FT
Sbjct: 314 ENGDINANIAFDMDMLMFTQCSGGKERSRAEFEALAAASCFT 355
>AT1G76790.1 | chr1:28822355-28823630 REVERSE LENGTH=368
Length = 367
Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 77/124 (62%), Gaps = 6/124 (4%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLP-ET 63
VEH+AG+M+ VP GDAILL+ +L ++DEDC KILKNC +ALP+ GKVI+++ + P E
Sbjct: 246 VEHVAGDMFVDVPKGDAILLKRILHDWTDEDCEKILKNCWKALPENGKVIVMEVVTPDEA 305
Query: 64 PNTSPAARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFTGTFRSTYI--FLNFYALE 121
N + +F MD++M GK+R+ E+ +A +GF R ++ + + +E
Sbjct: 306 DNRDVISNIAFDMDLLMLTQLSGGKERSRAEYVAMAANSGFP---RCNFVCSAYHLWVIE 362
Query: 122 FNKQ 125
KQ
Sbjct: 363 LTKQ 366
>AT1G77530.1 | chr1:29136037-29137423 FORWARD LENGTH=382
Length = 381
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLPETP 64
V+H++G+M+ VP GDAI ++W+L + DEDCIKILKNC ++LP+ GKVIIV+ + P P
Sbjct: 262 VKHVSGDMFIEVPKGDAIFMKWILHDWGDEDCIKILKNCWKSLPEKGKVIIVEMITPMEP 321
Query: 65 NTSP-AARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGF 104
+ + MD++M GK+R+ +F LA +GF
Sbjct: 322 KPNDFSCNTVLGMDLLMLTQCSGGKERSLSQFENLAFASGF 362
>AT5G37170.1 | chr5:14712811-14714303 FORWARD LENGTH=335
Length = 334
Score = 89.7 bits (221), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLPETP 64
VEH+ G+M+ VP GDAI ++ +L ++D+DC+KIL NC ++LP+ GKVIIVD + P P
Sbjct: 215 VEHVPGDMFIDVPKGDAIFMRRILRDWNDKDCVKILTNCWKSLPEKGKVIIVDMVAPSEP 274
Query: 65 NTSPA-ARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFTGTFRSTYIFLNFYALEFN 123
+ ++ F DM+M GK R+ +F LA +GF S + + +EF+
Sbjct: 275 KSDDIFSKVVFGTDMLMLTQCSCGKVRSFAQFEALASASGFHKCEVSGLAY-TYSVIEFH 333
Query: 124 K 124
K
Sbjct: 334 K 334
>AT4G35150.1 | chr4:16726948-16728531 REVERSE LENGTH=326
Length = 325
Score = 88.6 bits (218), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 71/109 (65%), Gaps = 8/109 (7%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQA-LPKGGKVIIVDGLLPET 63
VE++ G+M++S+P DA++++W+L + D+DCIKILKNC +A LP GKV+IV+ ++ E
Sbjct: 198 VENVEGDMFDSIPASDAVIIKWVLHDWGDKDCIKILKNCKEAVLPNIGKVLIVECVIGEK 257
Query: 64 PNTSPA-ARDS------FTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFT 105
NT A RD +DM+M V GK+RT +E+ + EAGF
Sbjct: 258 KNTMIAEERDDKLEHVRLQLDMVMMVHTSTGKERTLKEWDFVLTEAGFA 306
>AT5G53810.1 | chr5:21850329-21852762 REVERSE LENGTH=379
Length = 378
Score = 85.5 bits (210), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKGGKVIIVDGLLP-ET 63
V H+AG+M+ +P GDAI ++W+L ++DE C+ ILKNC ++L + GK+IIV+ + P E
Sbjct: 259 VNHVAGDMFIKIPKGDAIFMKWILHDWTDEQCVAILKNCWKSLEENGKLIIVEMVTPVEA 318
Query: 64 PNTSPAARDSFTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFT 105
+ + F MDM M GK+R EF LA +GF+
Sbjct: 319 KSGDICSNIVFGMDMTMLTQCSGGKERDLYEFENLAYASGFS 360
>AT4G35160.1 | chr4:16730989-16732808 REVERSE LENGTH=383
Length = 382
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 8/109 (7%)
Query: 5 VEHIAGNMYESVPNGDAILLQWMLLMFSDEDCIKILKNCHQALPKG-GKVIIVDGLLPET 63
VE++ G+M++S+P DAI ++W+L + D+DCIKILKNC +A+P GKV+IV+ ++ E
Sbjct: 255 VENVEGDMFDSIPACDAIFIKWVLHDWGDKDCIKILKNCKEAVPPNIGKVLIVESVIGEN 314
Query: 64 PNTSPA-ARDS------FTMDMIMFVLFKVGKQRTEQEFAKLAKEAGFT 105
T RD +DM+M GK+RT +E+ + KEAGF
Sbjct: 315 KKTMIVDERDEKLEHVRLMLDMVMMAHTSTGKERTLKEWDFVLKEAGFA 363
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.138 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,913,406
Number of extensions: 111649
Number of successful extensions: 311
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 296
Number of HSP's successfully gapped: 17
Length of query: 128
Length of database: 11,106,569
Length adjustment: 87
Effective length of query: 41
Effective length of database: 8,721,377
Effective search space: 357576457
Effective search space used: 357576457
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 105 (45.1 bits)