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Os12g0197900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0123) R2 : 0.117
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.201 (0.0259) R2dN8 : 0.151 R2N8 : 0.117
σ : 0.231
deviance : 24.59
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
13.49 0.173 10.8 0.335 0.165 0.421 0.0368 0.195 0.175 1.89 19.4 3243 -- --
13.54 0.171 10.8 0.317 0.165 0.374 0.0311 -- 0.173 1.86 19.42 3264 -- --
13.47 0.171 10.8 0.352 0.162 0.44 -- 0.258 0.18 1.6 19.21 2878 -- --
13.54 0.171 10.8 0.311 0.165 0.376 -- -- 0.17 1.81 19.4 3244 -- --
14.82 0.179 10.8 0.369 -- 0.441 -- 0.281 0.186 -- 19.29 2513 -- --
15.77 0.186 10.8 0.513 0.168 -- 0.0359 -- 0.255 1.84 -- -- -- --
15.77 0.186 10.8 0.512 0.168 -- -- -- 0.255 1.79 -- -- -- --
14.92 0.18 10.8 0.331 -- 0.374 -- -- 0.177 -- 19.43 2509 -- --
13.42 0.171 10.8 -- 0.161 0.507 -- -- 0.0918 1.74 18.47 24804 -- --
17.49 0.195 10.8 0.519 -- -- -- -- 0.259 -- -- -- -- --
22.68 0.223 10.8 -- 0.178 -- -- -- 0.198 1.87 -- -- -- --
15 0.18 10.8 -- -- 0.514 -- -- 0.0956 -- 18.44 24076 -- --
24.59 0.231 10.8 -- -- -- -- -- 0.201 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 12.40 wind 1 43200 < th dose dependent rect. 6 2
3 12.50 wind 1 14400 > th dose independent rect. 20 9
5 12.52 wind 1 43200 < th dose dependent rect. 4 4
6 12.54 wind 1 14400 < th dose independent rect. 20 9
7 12.54 wind 1 43200 < th dose dependent rect. 23 3
12 12.58 wind 1 14400 < th dose independent rect. 23 6
18 12.62 wind 1 43200 < th dose independent rect. 23 3
21 12.62 wind 1 14400 < th dose dependent rect. 23 6
22 12.64 wind 1 43200 > th dose independent rect. 14 1
23 12.64 wind 1 14400 > th dose independent rect. 23 6
41 12.68 wind 1 14400 < th dose dependent rect. 20 9
46 12.70 wind 1 14400 > th dose independent sin 13 NA
60 12.72 wind 1 43200 < th dose independent rect. 6 2
87 12.76 wind 1 14400 < th dose dependent rect. 13 18
88 12.77 wind 1 43200 > th dose independent rect. 8 1
106 12.79 wind 1 14400 < th dose independent sin 13 NA
113 12.79 wind 1 14400 < th dose independent rect. 14 17
135 12.81 humidity 90 14400 > th dose dependent rect. 4 2
140 12.82 wind 1 43200 > th dose independent sin 9 NA
156 12.83 wind 1 43200 < th dose dependent rect. 2 12
170 12.84 wind 1 43200 < th dose dependent rect. 13 13
179 12.85 wind 1 14400 < th dose dependent sin 13 NA
182 12.85 wind 1 43200 < th dose dependent rect. 19 17
183 12.85 wind 1 43200 < th dose dependent rect. 19 20
221 12.87 wind 1 43200 < th dose dependent rect. 10 20
224 12.88 humidity 80 43200 > th dose independent rect. 6 2
238 12.89 humidity 50 43200 > th dose independent rect. 14 2
250 12.89 wind 1 43200 < th dose dependent rect. 11 18
263 12.90 atmosphere 995 43200 > th dose dependent rect. 23 1
266 12.90 wind 1 43200 < th dose dependent rect. 4 10
271 12.90 wind 1 43200 < th dose dependent rect. 8 22
279 12.91 wind 5 43200 < th dose dependent rect. 19 1
288 12.91 atmosphere 995 43200 > th dose dependent rect. 22 7
295 12.91 wind 1 43200 < th dose dependent rect. 3 23
304 12.92 atmosphere 995 43200 > th dose dependent rect. 2 1
305 12.92 atmosphere 995 43200 > th dose dependent rect. 4 1
307 12.92 atmosphere 1015 43200 < th dose dependent rect. 23 2
338 12.93 atmosphere 1015 43200 < th dose dependent rect. 4 1
374 12.94 wind 7 43200 < th dose independent rect. 18 2
467 12.95 wind 1 43200 < th dose dependent sin 7 NA
469 12.95 atmosphere 995 43200 > th dose dependent sin 8 NA
540 12.96 wind 7 43200 > th dose independent rect. 18 2
624 12.96 wind 1 43200 < th dose dependent rect. 5 21
628 12.97 wind 1 43200 < th dose independent rect. 14 1
646 12.97 atmosphere 1015 43200 < th dose dependent sin 9 NA
650 12.97 atmosphere 995 43200 > th dose dependent rect. 8 1
651 12.97 atmosphere 995 43200 > th dose dependent rect. 10 1
662 12.97 wind 5 43200 < th dose dependent rect. 18 5
751 12.97 atmosphere 995 43200 > th dose dependent rect. 8 22
763 12.98 humidity 50 43200 < th dose independent rect. 14 2
774 12.98 atmosphere 995 43200 > th dose dependent no NA NA
849 12.98 atmosphere 995 43200 > th dose dependent rect. 10 17
860 12.98 atmosphere 995 43200 > th dose dependent rect. 8 18
900 12.98 atmosphere 995 43200 > th dose dependent rect. 2 22
956 12.99 wind 1 43200 < th dose dependent no NA NA