Os12g0193200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : mRNA capping enzyme family protein.
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Os12g0193200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : mRNA capping enzyme family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.81 | 0.161 | 10.1 | -0.762 | 0.489 | 0.307 | -0.43 | 0.0965 | -0.233 | 4.46 | 70.71 | 966 | -- | -- |
| 11.83 | 0.16 | 10.1 | -0.752 | 0.491 | 0.314 | -0.431 | -- | -0.23 | 4.44 | 70.34 | 971 | -- | -- |
| 12.28 | 0.163 | 10.1 | -0.766 | 0.499 | 0.3 | -- | 0.135 | -0.233 | 4.5 | 70.02 | 1005 | -- | -- |
| 12.31 | 0.163 | 10.1 | -0.748 | 0.499 | 0.306 | -- | -- | -0.225 | 4.49 | 70.71 | 1004 | -- | -- |
| 15.98 | 0.186 | 10.1 | -0.873 | -- | 0.451 | -- | 0.283 | -0.286 | -- | 75 | 479 | -- | -- |
| 14.49 | 0.178 | 10.1 | -0.804 | 0.522 | -- | -0.387 | -- | -0.256 | 5.35 | -- | -- | -- | -- |
| 14.86 | 0.181 | 10.1 | -0.805 | 0.52 | -- | -- | -- | -0.255 | 5.4 | -- | -- | -- | -- |
| 15 | 0.18 | 10.1 | -0.769 | -- | 0.513 | -- | -- | -0.217 | -- | 74 | 461 | -- | -- |
| 26.52 | 0.24 | 10.1 | -- | 0.498 | 0.432 | -- | -- | -0.132 | 4.19 | 70.89 | 1029 | -- | -- |
| 28.95 | 0.251 | 10.1 | -0.787 | -- | -- | -- | -- | -0.242 | -- | -- | -- | -- | -- |
| 31.92 | 0.264 | 10.1 | -- | 0.507 | -- | -- | -- | -0.165 | 5.46 | -- | -- | -- | -- |
| 30.22 | 0.256 | 10.1 | -- | -- | 0.574 | -- | -- | -0.135 | -- | 72.93 | 507 | -- | -- |
| 45.29 | 0.314 | 10.1 | -- | -- | -- | -- | -- | -0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 2 | 11.65 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 3 | 11.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 4 | 11.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 5 | 11.69 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 6 | 11.70 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 10 | 11.73 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 19 | 11.76 | wind | 3.0 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 22 | 11.77 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 24 | 11.77 | wind | 3.0 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 37 | 11.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 79 | 11.84 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 102 | 11.86 | humidity | 70.0 | 720 | > th | dose independent | rect. | 1 | 23 |
| 130 | 11.88 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 165 | 11.90 | humidity | 70.0 | 720 | > th | dose independent | rect. | 9 | 22 |
| 167 | 11.90 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 18 |
| 213 | 11.93 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 217 | 11.93 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 222 | 11.94 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 241 | 11.95 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 258 | 11.95 | humidity | 70.0 | 720 | > th | dose independent | rect. | 3 | 17 |
| 299 | 11.97 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 20 |
| 302 | 11.97 | humidity | 70.0 | 720 | < th | dose independent | rect. | 13 | 22 |
| 314 | 11.98 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 15 |
| 319 | 11.98 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 330 | 11.99 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 344 | 11.99 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 23 |
| 345 | 11.99 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 361 | 12.00 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 19 |
| 364 | 12.00 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 368 | 12.00 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 371 | 12.01 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 386 | 12.01 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 391 | 12.01 | humidity | 70.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 393 | 12.01 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 394 | 12.01 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 396 | 12.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 413 | 12.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 418 | 12.02 | humidity | 70.0 | 720 | > th | dose independent | no | NA | NA |
| 439 | 12.02 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 449 | 12.02 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 14 | 14 |
| 453 | 12.02 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 457 | 12.02 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 19 |
| 469 | 12.03 | humidity | 90.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 470 | 12.03 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 471 | 12.03 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 526 | 12.04 | humidity | 90.0 | 14400 | > th | dose independent | no | NA | NA |
| 537 | 12.04 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 1 | 15 |
| 564 | 12.04 | humidity | 70.0 | 720 | > th | dose independent | rect. | 21 | 23 |
| 565 | 12.04 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 634 | 12.05 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 23 |
| 635 | 12.05 | humidity | 70.0 | 720 | > th | dose independent | rect. | 23 | 23 |
| 636 | 12.05 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 639 | 12.05 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 644 | 12.05 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 665 | 12.06 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 670 | 12.06 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 7 |
| 674 | 12.06 | humidity | 70.0 | 720 | > th | dose independent | rect. | 9 | 15 |
| 693 | 12.06 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 23 |
| 698 | 12.06 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 699 | 12.06 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 703 | 12.06 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 24 | 7 |
| 704 | 12.06 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 705 | 12.06 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 7 |
| 717 | 12.06 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 20 |
| 726 | 12.07 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 738 | 12.07 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 761 | 12.07 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 762 | 12.07 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 779 | 12.08 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 784 | 12.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 790 | 12.08 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 1 | 15 |
| 816 | 12.08 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 824 | 12.08 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 22 |
| 834 | 12.09 | humidity | 70.0 | 720 | < th | dose independent | rect. | 9 | 11 |
| 872 | 12.09 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 875 | 12.09 | humidity | 70.0 | 720 | < th | dose independent | rect. | 17 | 23 |
| 876 | 12.09 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 878 | 12.09 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 881 | 12.09 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 884 | 12.09 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 889 | 12.09 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 903 | 12.10 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 909 | 12.10 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 934 | 12.10 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 21 |
| 959 | 12.11 | temperature | 25.0 | 14400 | > th | dose independent | sin | 3 | NA |
| 962 | 12.11 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 963 | 12.11 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 964 | 12.11 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 970 | 12.11 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 999 | 12.11 | humidity | 70.0 | 720 | > th | dose independent | rect. | 13 | 18 |