Os12g0180900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os12g0180900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.1 | 0.511 | 6.67 | -1.93 | 0.936 | 1.04 | -0.719 | -0.264 | -0.193 | 12.7 | 21.07 | 9 | -- | -- |
| 118.02 | 0.51 | 6.66 | -1.88 | 0.937 | 1.03 | -0.783 | -- | -0.178 | 12.7 | 21.07 | 9 | -- | -- |
| 119.31 | 0.509 | 6.68 | -2.09 | 0.935 | 1.07 | -- | -1.08 | -0.235 | 12.6 | 21 | 2 | -- | -- |
| 120.43 | 0.511 | 6.66 | -1.91 | 0.943 | 1 | -- | -- | -0.181 | 12.6 | 21.1 | 2 | -- | -- |
| 157.62 | 0.585 | 6.74 | -2.37 | -- | 1.92 | -- | -1.61 | -0.407 | -- | 21 | 2 | -- | -- |
| 134.13 | 0.543 | 6.62 | -1.68 | 1.29 | -- | -0.648 | -- | -0.00849 | 13.1 | -- | -- | -- | -- |
| 135.87 | 0.546 | 6.62 | -1.71 | 1.29 | -- | -- | -- | -0.0122 | 13.1 | -- | -- | -- | -- |
| 160.12 | 0.589 | 6.71 | -2.1 | -- | 1.82 | -- | -- | -0.329 | -- | 20.94 | 2 | -- | -- |
| 208.58 | 0.676 | 6.59 | -- | 1.15 | 0.499 | -- | -- | 0.13 | 12.9 | 24.2 | 2 | -- | -- |
| 239.34 | 0.723 | 6.64 | -1.75 | -- | -- | -- | -- | -0.0378 | -- | -- | -- | -- | -- |
| 212.51 | 0.682 | 6.58 | -- | 1.32 | -- | -- | -- | 0.178 | 13.2 | -- | -- | -- | -- |
| 267.05 | 0.761 | 6.63 | -- | -- | 1.45 | -- | -- | 0.021 | -- | 24.1 | 2 | -- | -- |
| 320.54 | 0.836 | 6.6 | -- | -- | -- | -- | -- | 0.157 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 5 | 110.90 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 20 |
| 6 | 111.00 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 17 |
| 7 | 111.15 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 14 | 111.55 | temperature | 20 | 10 | > th | dose dependent | sin | 2 | NA |
| 18 | 111.71 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 21 | 111.90 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 10 |
| 28 | 112.03 | temperature | 30 | 10 | < th | dose dependent | sin | 1 | NA |
| 39 | 112.23 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 10 |
| 107 | 113.48 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 136 | 113.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 12 |
| 174 | 114.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 182 | 114.41 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 8 |
| 215 | 114.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 9 |
| 218 | 114.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 234 | 114.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 242 | 114.99 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 18 |
| 248 | 115.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 6 |
| 249 | 115.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 10 |
| 285 | 115.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 8 |
| 314 | 115.55 | temperature | 10 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 495 | 116.53 | temperature | 25 | 30 | < th | dose independent | rect. | 2 | 15 |
| 640 | 117.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 21 |
| 682 | 117.26 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 1 |
| 752 | 117.53 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 9 |
| 770 | 117.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 938 | 118.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 987 | 118.24 | temperature | 25 | 270 | < th | dose independent | rect. | 24 | 16 |