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Os12g0179700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.43 (0.0125) R2 : 0.0757
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.161 (0.0264) R2dN8 : 0.0977 R2N8 : 0.0757
σ : 0.236
deviance : 25.63
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.51 0.202 8.45 0.373 1.19 1.59 1.74 1.79 0.235 17.2 0.8392 687 -- --
18.86 0.202 8.43 0.409 0.91 1.26 0.276 -- 0.246 17.2 0.8394 691 -- --
21.64 0.218 8.42 0.305 0.162 0.00925 -- -0.196 0.194 7.34 0.9934 789 -- --
19.05 0.203 8.43 0.405 0.909 1.26 -- -- 0.247 17.2 0.84 689 -- --
19.85 0.208 8.41 0.422 -- 0.528 -- -0.0168 0.271 -- 0.9573 1335 -- --
21.88 0.219 8.42 0.302 0.157 -- -0.00482 -- 0.192 7.09 -- -- -- --
21.88 0.219 8.42 0.302 0.157 -- -- -- 0.192 7.09 -- -- -- --
19.82 0.207 8.41 0.413 -- 0.519 -- -- 0.253 -- 0.92 1339 -- --
22.92 0.223 8.43 -- 0.542 0.814 -- -- 0.192 16.9 1.68 682 -- --
23.18 0.225 8.42 0.305 -- -- -- -- 0.195 -- -- -- -- --
24.28 0.231 8.43 -- 0.16 -- -- -- 0.159 6.97 -- -- -- --
23.58 0.226 8.42 -- -- 0.263 -- -- 0.174 -- 10 849 -- --
25.63 0.236 8.43 -- -- -- -- -- 0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.70 humidity 70.0 1440 > th dose dependent rect. 18 1
3 17.84 humidity 90.0 1440 > th dose dependent rect. 18 4
8 18.10 humidity 80.0 1440 > th dose independent rect. 8 12
17 18.14 humidity 90.0 1440 > th dose dependent rect. 13 9
21 18.15 radiation 1.0 1440 < th dose dependent rect. 7 11
22 18.16 humidity 80.0 1440 < th dose independent rect. 8 12
35 18.23 radiation 1.0 1440 < th dose dependent rect. 7 15
42 18.25 radiation 1.0 1440 < th dose dependent rect. 7 19
43 18.25 radiation 1.0 1440 < th dose dependent rect. 7 22
62 18.30 humidity 80.0 1440 > th dose independent rect. 16 4
72 18.32 humidity 80.0 1440 > th dose dependent rect. 9 12
92 18.36 radiation 1.0 1440 < th dose dependent rect. 12 8
103 18.37 radiation 1.0 1440 < th dose dependent sin 21 NA
110 18.37 radiation 1.0 1440 < th dose dependent rect. 12 17
119 18.38 precipitation 0.1 14400 > th dose dependent rect. 17 7
127 18.39 humidity 80.0 1440 > th dose independent sin 22 NA
148 18.40 precipitation 0.1 14400 > th dose dependent rect. 17 4
182 18.44 humidity 80.0 1440 < th dose independent rect. 16 4
212 18.46 precipitation 0.1 14400 > th dose dependent rect. 13 10
245 18.49 precipitation 0.1 14400 < th dose independent rect. 17 4
248 18.49 precipitation 0.1 1440 > th dose independent rect. 14 12
249 18.49 precipitation 0.1 14400 < th dose dependent rect. 17 4
259 18.50 precipitation 0.1 14400 > th dose independent rect. 17 4
260 18.50 precipitation 0.1 1440 < th dose independent rect. 14 13
274 18.50 precipitation 0.1 1440 < th dose dependent rect. 14 13
301 18.51 radiation 1.0 720 < th dose dependent rect. 20 23
308 18.52 precipitation 0.1 43200 > th dose dependent rect. 19 1
343 18.55 humidity 80.0 1440 < th dose independent sin 22 NA
344 18.55 precipitation 0.1 14400 > th dose independent rect. 16 7
345 18.55 precipitation 0.1 14400 < th dose independent rect. 16 7
353 18.55 precipitation 0.1 14400 < th dose dependent rect. 16 7
385 18.57 radiation 1.0 720 < th dose dependent rect. 12 20
389 18.58 precipitation 0.1 1440 > th dose independent rect. 14 8
395 18.58 precipitation 0.1 1440 < th dose independent rect. 11 14
400 18.58 precipitation 0.1 14400 > th dose dependent sin 18 NA
407 18.58 precipitation 0.1 1440 > th dose dependent rect. 14 14
408 18.58 precipitation 0.1 1440 < th dose dependent rect. 11 14
443 18.60 radiation 1.0 1440 < th dose dependent rect. 16 2
481 18.62 radiation 1.0 1440 < th dose dependent rect. 16 4
516 18.64 precipitation 0.1 1440 < th dose independent sin 17 NA
531 18.64 precipitation 0.1 1440 < th dose dependent sin 17 NA
554 18.65 precipitation 0.1 1440 > th dose independent sin 17 NA
570 18.65 humidity 70.0 1440 > th dose dependent sin 20 NA
584 18.65 radiation 1.0 720 < th dose dependent rect. 4 15
617 18.67 precipitation 0.1 1440 < th dose independent rect. 14 7
627 18.67 precipitation 0.1 1440 < th dose dependent rect. 14 7
664 18.69 humidity 90.0 1440 > th dose independent rect. 20 2
684 18.69 precipitation 0.1 1440 > th dose dependent sin 16 NA
717 18.70 precipitation 0.1 1440 > th dose dependent rect. 14 8
759 18.71 precipitation 0.1 1440 > th dose dependent rect. 14 19
788 18.73 precipitation 0.1 1440 < th dose independent rect. 11 10
801 18.73 precipitation 0.1 1440 < th dose dependent rect. 11 10
823 18.73 radiation 1.0 720 < th dose dependent rect. 4 23
902 18.75 precipitation 0.1 1440 > th dose dependent rect. 22 21
916 18.76 precipitation 0.1 1440 > th dose independent rect. 4 15
975 18.77 wind 1.0 43200 > th dose independent rect. 24 2
998 18.77 radiation 1.0 720 < th dose dependent no NA NA